Incidental Mutation 'R5551:Fignl1'
ID 435136
Institutional Source Beutler Lab
Gene Symbol Fignl1
Ensembl Gene ENSMUSG00000035455
Gene Name fidgetin-like 1
Synonyms
MMRRC Submission 043108-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R5551 (G1)
Quality Score 225
Status Not validated
Chromosome 11
Chromosomal Location 11750288-11758983 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 11751603 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Glutamic Acid at position 484 (V484E)
Ref Sequence ENSEMBL: ENSMUSP00000126340 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000047689] [ENSMUST00000109664] [ENSMUST00000150714] [ENSMUST00000171080] [ENSMUST00000171938]
AlphaFold Q8BPY9
Predicted Effect probably damaging
Transcript: ENSMUST00000047689
AA Change: V484E

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000036932
Gene: ENSMUSG00000035455
AA Change: V484E

DomainStartEndE-ValueType
low complexity region 1 15 N/A INTRINSIC
low complexity region 202 214 N/A INTRINSIC
AAA 442 578 2.62e-20 SMART
Pfam:Vps4_C 635 680 6.5e-9 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000109664
AA Change: V484E

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000105290
Gene: ENSMUSG00000035455
AA Change: V484E

DomainStartEndE-ValueType
low complexity region 1 15 N/A INTRINSIC
low complexity region 202 214 N/A INTRINSIC
AAA 442 578 2.62e-20 SMART
Pfam:Vps4_C 635 680 6.5e-9 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000123815
Predicted Effect probably benign
Transcript: ENSMUST00000150714
SMART Domains Protein: ENSMUSP00000119528
Gene: ENSMUSG00000035455

DomainStartEndE-ValueType
low complexity region 1 15 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000152345
Predicted Effect probably damaging
Transcript: ENSMUST00000171080
AA Change: V484E

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000127489
Gene: ENSMUSG00000035455
AA Change: V484E

DomainStartEndE-ValueType
low complexity region 1 15 N/A INTRINSIC
low complexity region 202 214 N/A INTRINSIC
AAA 442 578 2.62e-20 SMART
Pfam:Vps4_C 635 680 9.4e-10 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000171938
AA Change: V484E

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000126340
Gene: ENSMUSG00000035455
AA Change: V484E

DomainStartEndE-ValueType
low complexity region 1 15 N/A INTRINSIC
low complexity region 202 214 N/A INTRINSIC
AAA 442 578 2.62e-20 SMART
Pfam:Vps4_C 635 680 6.5e-9 PFAM
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.7%
  • 10x: 98.6%
  • 20x: 96.1%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the AAA ATPase family of proteins. The encoded protein is recruited to sites of DNA damage where it plays a role in DNA double-strand break repair via homologous recombination. This protein has also been shown to localize to the centrosome and inhibit ciliogenesis, and may regulate the proliferation and differentiation of osteoblasts. [provided by RefSeq, Oct 2016]
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
AB041806 G T 4: 138,123,312 (GRCm39) P3T probably damaging Het
Abl1 C T 2: 31,691,682 (GRCm39) A1048V probably benign Het
Acap2 A G 16: 30,923,726 (GRCm39) V659A probably damaging Het
Acox1 A G 11: 116,080,317 (GRCm39) S29P possibly damaging Het
Adamts1 A G 16: 85,594,634 (GRCm39) I405T probably benign Het
Afm A T 5: 90,679,511 (GRCm39) E335V probably null Het
Akap6 C T 12: 52,842,747 (GRCm39) P32S probably damaging Het
Alk T C 17: 72,182,028 (GRCm39) M1332V possibly damaging Het
Ankrd39 C T 1: 36,581,062 (GRCm39) G96R probably damaging Het
Atp2c1 C A 9: 105,336,936 (GRCm39) A16S probably damaging Het
Ccdc141 T C 2: 76,844,753 (GRCm39) E1438G probably damaging Het
Csmd2 T C 4: 128,404,741 (GRCm39) Y2376H possibly damaging Het
Csmd3 T C 15: 48,177,492 (GRCm39) T349A probably benign Het
Ctsr A T 13: 61,307,357 (GRCm39) M313K probably damaging Het
Dot1l CCAGCCCCACCCTCAGCC CCAGCC 10: 80,619,462 (GRCm39) probably benign Het
Dync2h1 A G 9: 7,031,718 (GRCm39) S3516P possibly damaging Het
Ehd4 A G 2: 119,958,100 (GRCm39) S162P possibly damaging Het
Ets2 T C 16: 95,513,165 (GRCm39) W114R probably damaging Het
Golph3 C A 15: 12,321,922 (GRCm39) S35R probably benign Het
Gzf1 T C 2: 148,526,248 (GRCm39) Y240H probably damaging Het
Hook3 A G 8: 26,558,639 (GRCm39) F75S possibly damaging Het
Ifi209 T A 1: 173,468,763 (GRCm39) S198T probably benign Het
Iqch A T 9: 63,403,535 (GRCm39) probably null Het
Katnip T C 7: 125,419,249 (GRCm39) F472S probably damaging Het
Lrrk2 C T 15: 91,696,553 (GRCm39) T2447I probably benign Het
Mesp2 T C 7: 79,461,367 (GRCm39) S231P probably benign Het
Muc5b T C 7: 141,422,240 (GRCm39) C4459R possibly damaging Het
Myh10 A G 11: 68,659,113 (GRCm39) E497G possibly damaging Het
Nalcn A T 14: 123,515,698 (GRCm39) V1701E possibly damaging Het
Nat8f1 T C 6: 85,887,891 (GRCm39) D23G probably damaging Het
Nfia G A 4: 97,902,497 (GRCm39) E250K probably damaging Het
Nup155 A G 15: 8,177,817 (GRCm39) M1067V probably benign Het
Or4k36 T C 2: 111,145,916 (GRCm39) F31L possibly damaging Het
Pde4d T A 13: 110,084,930 (GRCm39) probably null Het
Rtn4 G A 11: 29,691,011 (GRCm39) V1101I probably damaging Het
Sema4c A G 1: 36,591,398 (GRCm39) Y348H probably damaging Het
Sema6a A G 18: 47,381,595 (GRCm39) V958A possibly damaging Het
Sez6l2 A G 7: 126,566,002 (GRCm39) Y677C probably damaging Het
Smad5 T C 13: 56,883,654 (GRCm39) C347R probably damaging Het
Smim19 A G 8: 22,953,383 (GRCm39) Y95H probably benign Het
Srrm2 C A 17: 24,037,450 (GRCm39) probably benign Het
Ssb A G 2: 69,701,474 (GRCm39) K390E probably damaging Het
Tars1 G A 15: 11,392,068 (GRCm39) T248M probably damaging Het
Tcirg1 A T 19: 3,948,858 (GRCm39) F442L probably damaging Het
Tex55 A G 16: 38,648,336 (GRCm39) Y258H probably benign Het
Tlk2 A G 11: 105,112,133 (GRCm39) E162G probably benign Het
Tmc6 A G 11: 117,660,271 (GRCm39) C656R probably damaging Het
Ttn G T 2: 76,719,406 (GRCm39) probably benign Het
Uqcrc2 C T 7: 120,244,461 (GRCm39) T201I probably damaging Het
Zfp282 G T 6: 47,867,579 (GRCm39) A252S possibly damaging Het
Zfp473 G C 7: 44,383,575 (GRCm39) P253A probably benign Het
Zfp541 A G 7: 15,824,786 (GRCm39) N1068D probably damaging Het
Zfp946 A G 17: 22,674,365 (GRCm39) Q373R probably damaging Het
Zmat2 G A 18: 36,927,010 (GRCm39) G6R probably benign Het
Other mutations in Fignl1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02377:Fignl1 APN 11 11,752,845 (GRCm39) missense possibly damaging 0.56
IGL02634:Fignl1 APN 11 11,752,756 (GRCm39) nonsense probably null
IGL03161:Fignl1 APN 11 11,752,680 (GRCm39) missense probably benign 0.13
R0226:Fignl1 UTSW 11 11,751,061 (GRCm39) missense probably benign 0.14
R2019:Fignl1 UTSW 11 11,752,054 (GRCm39) missense probably damaging 0.99
R4611:Fignl1 UTSW 11 11,751,268 (GRCm39) missense probably benign
R4744:Fignl1 UTSW 11 11,751,585 (GRCm39) missense probably damaging 0.98
R5182:Fignl1 UTSW 11 11,751,717 (GRCm39) missense probably damaging 1.00
R5322:Fignl1 UTSW 11 11,751,571 (GRCm39) missense probably damaging 1.00
R5470:Fignl1 UTSW 11 11,752,640 (GRCm39) missense probably benign 0.00
R5765:Fignl1 UTSW 11 11,752,011 (GRCm39) splice site probably null
R6135:Fignl1 UTSW 11 11,752,557 (GRCm39) missense probably benign
R7714:Fignl1 UTSW 11 11,752,842 (GRCm39) missense probably damaging 1.00
R8996:Fignl1 UTSW 11 11,752,953 (GRCm39) missense probably damaging 1.00
R9065:Fignl1 UTSW 11 11,752,692 (GRCm39) missense possibly damaging 0.60
R9467:Fignl1 UTSW 11 11,751,483 (GRCm39) missense probably damaging 1.00
R9558:Fignl1 UTSW 11 11,751,778 (GRCm39) missense possibly damaging 0.92
R9729:Fignl1 UTSW 11 11,752,219 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GATTTGTAGCTCCCACCACAAG -3'
(R):5'- AAAGGAAATCGTTGTGTGGC -3'

Sequencing Primer
(F):5'- AATCCGGTCTTCAGAAGATGTG -3'
(R):5'- CCCATGATGAGGCCAGATATCTTTAC -3'
Posted On 2016-10-24