Incidental Mutation 'R5554:Gda'
ID 435318
Institutional Source Beutler Lab
Gene Symbol Gda
Ensembl Gene ENSMUSG00000058624
Gene Name guanine deaminase
Synonyms
MMRRC Submission 043111-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R5554 (G1)
Quality Score 225
Status Validated
Chromosome 19
Chromosomal Location 21368671-21450025 bp(-) (GRCm39)
Type of Mutation splice site (6 bp from exon)
DNA Base Change (assembly) A to G at 21405837 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000112758 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000087600] [ENSMUST00000121725]
AlphaFold Q9R111
Predicted Effect probably null
Transcript: ENSMUST00000087600
SMART Domains Protein: ENSMUSP00000084882
Gene: ENSMUSG00000058624

DomainStartEndE-ValueType
Pfam:Amidohydro_1 73 447 6.8e-78 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000121725
SMART Domains Protein: ENSMUSP00000112758
Gene: ENSMUSG00000058624

DomainStartEndE-ValueType
Pfam:Amidohydro_1 1 327 5.9e-46 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000136258
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.7%
  • 10x: 98.6%
  • 20x: 96.1%
Validation Efficiency 97% (73/75)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an enzyme responsible for the hydrolytic deamination of guanine. Studies in rat ortholog suggest this gene plays a role in microtubule assembly. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2011]
Allele List at MGI
Other mutations in this stock
Total: 68 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aarsd1 C A 11: 101,304,807 (GRCm39) R227L probably benign Het
Adamtsl1 A G 4: 86,195,182 (GRCm39) Q533R possibly damaging Het
Adgb C T 10: 10,216,217 (GRCm39) R1524H probably damaging Het
Ank2 A T 3: 126,792,622 (GRCm39) N739K possibly damaging Het
Ankrd39 C T 1: 36,581,062 (GRCm39) G96R probably damaging Het
Anxa10 G A 8: 62,514,080 (GRCm39) P249L possibly damaging Het
Banp G A 8: 122,718,334 (GRCm39) E183K probably damaging Het
BC051665 C G 13: 60,932,435 (GRCm39) L83F probably damaging Het
Btn1a1 A T 13: 23,643,295 (GRCm39) F385I possibly damaging Het
Chchd4 A T 6: 91,441,999 (GRCm39) *140R probably null Het
Dcpp2 T C 17: 24,119,545 (GRCm39) Y120H probably damaging Het
Dlx2 G A 2: 71,375,805 (GRCm39) R173C possibly damaging Het
Dmbt1 C A 7: 130,701,030 (GRCm39) Y1069* probably null Het
Dop1a T A 9: 86,403,710 (GRCm39) F1637I probably damaging Het
Dusp18 T C 11: 3,847,202 (GRCm39) I64T probably damaging Het
Evi5l A G 8: 4,256,491 (GRCm39) probably benign Het
Fiz1 T C 7: 5,015,849 (GRCm39) H47R probably damaging Het
Fndc3b G T 3: 27,697,162 (GRCm39) P17T possibly damaging Het
Foxa1 T A 12: 57,589,077 (GRCm39) Q381L probably benign Het
Gm10044 T C 14: 7,771,181 (GRCm38) noncoding transcript Het
Gm12258 T A 11: 58,749,294 (GRCm39) S156R possibly damaging Het
Gm973 A G 1: 59,566,131 (GRCm39) R117G probably benign Het
Grwd1 C T 7: 45,480,064 (GRCm39) V48I probably damaging Het
Ifi209 T A 1: 173,468,763 (GRCm39) S198T probably benign Het
Inka2 T A 3: 105,623,930 (GRCm39) S82R possibly damaging Het
Itga1 A T 13: 115,129,010 (GRCm39) C549* probably null Het
Kmt2c C A 5: 25,499,608 (GRCm39) G511C probably damaging Het
Knstrn T C 2: 118,664,444 (GRCm39) probably benign Het
Lrp2 T C 2: 69,382,768 (GRCm39) Y39C possibly damaging Het
Maco1 T C 4: 134,555,445 (GRCm39) I343V probably benign Het
Micos10 T C 4: 138,833,218 (GRCm39) probably benign Het
N4bp2 T C 5: 65,965,457 (GRCm39) Y1169H probably benign Het
Nbr1 C T 11: 101,455,633 (GRCm39) T129I probably benign Het
Or52e8 A C 7: 104,625,189 (GRCm39) M1R probably null Het
Or5k15 A T 16: 58,710,169 (GRCm39) M138K possibly damaging Het
Or7g25 T C 9: 19,160,039 (GRCm39) I219V probably benign Het
Oxct1 T A 15: 4,120,677 (GRCm39) F254I probably benign Het
Patj T A 4: 98,342,633 (GRCm39) S576T possibly damaging Het
Pdxdc1 A T 16: 13,690,363 (GRCm39) C202S probably benign Het
Pet100 A T 8: 3,672,381 (GRCm39) I19F probably damaging Het
Pik3r5 T C 11: 68,385,059 (GRCm39) Y655H probably damaging Het
Pkhd1 A G 1: 20,151,476 (GRCm39) S3807P probably damaging Het
Ptma A G 1: 86,454,649 (GRCm39) T8A probably damaging Het
Ptpn3 G T 4: 57,240,843 (GRCm39) N257K probably damaging Het
R3hdm1 C A 1: 128,164,409 (GRCm39) Q1108K probably benign Het
Rimbp2 T C 5: 128,857,406 (GRCm39) D815G probably damaging Het
Scn10a A G 9: 119,523,196 (GRCm39) F66L probably benign Het
Selenot T C 3: 58,484,296 (GRCm39) probably null Het
Serpinb8 A G 1: 107,526,705 (GRCm39) T82A probably benign Het
Serpini2 G A 3: 75,175,295 (GRCm39) probably benign Het
Slc1a6 G T 10: 78,631,816 (GRCm39) G214V probably benign Het
Slc5a6 C A 5: 31,195,444 (GRCm39) A425S probably damaging Het
Smo C A 6: 29,736,123 (GRCm39) N38K possibly damaging Het
Smtn A T 11: 3,470,811 (GRCm39) C909* probably null Het
Sntg2 C T 12: 30,308,040 (GRCm39) R215H probably benign Het
Stk4 T A 2: 163,941,645 (GRCm39) V287E probably benign Het
Tdrd7 A G 4: 46,005,358 (GRCm39) D388G possibly damaging Het
Ttn A T 2: 76,642,652 (GRCm39) F13294L probably damaging Het
Ube2j1 T G 4: 33,040,745 (GRCm39) F84V probably damaging Het
Ugt3a1 A G 15: 9,370,287 (GRCm39) Q477R probably damaging Het
Utf1 T C 7: 139,523,859 (GRCm39) S25P probably benign Het
Vmn1r184 A T 7: 25,966,413 (GRCm39) H53L probably damaging Het
Vmn2r13 A T 5: 109,339,860 (GRCm39) N38K possibly damaging Het
Vps13a C T 19: 16,699,775 (GRCm39) D756N probably damaging Het
Vwa1 G T 4: 155,857,695 (GRCm39) D34E probably damaging Het
Zfhx2 A C 14: 55,301,774 (GRCm39) L2070R probably damaging Het
Zfp984 A G 4: 147,840,362 (GRCm39) V163A probably benign Het
Zp3r A T 1: 130,511,208 (GRCm39) M325K probably benign Het
Other mutations in Gda
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01134:Gda APN 19 21,394,429 (GRCm39) missense probably damaging 1.00
IGL01324:Gda APN 19 21,387,250 (GRCm39) missense probably damaging 0.98
IGL02814:Gda APN 19 21,405,839 (GRCm39) splice site probably null
IGL03037:Gda APN 19 21,411,673 (GRCm39) missense possibly damaging 0.89
IGL03274:Gda APN 19 21,394,371 (GRCm39) missense possibly damaging 0.88
R0106:Gda UTSW 19 21,374,920 (GRCm39) missense probably benign 0.02
R0106:Gda UTSW 19 21,374,920 (GRCm39) missense probably benign 0.02
R0312:Gda UTSW 19 21,394,369 (GRCm39) missense probably damaging 1.00
R0432:Gda UTSW 19 21,394,471 (GRCm39) missense probably damaging 0.98
R0529:Gda UTSW 19 21,402,901 (GRCm39) missense probably damaging 1.00
R0600:Gda UTSW 19 21,411,667 (GRCm39) missense possibly damaging 0.70
R0690:Gda UTSW 19 21,387,251 (GRCm39) missense probably benign
R1522:Gda UTSW 19 21,389,903 (GRCm39) missense probably benign
R1652:Gda UTSW 19 21,378,042 (GRCm39) missense probably damaging 0.99
R1917:Gda UTSW 19 21,375,004 (GRCm39) splice site probably benign
R2078:Gda UTSW 19 21,378,036 (GRCm39) missense probably damaging 1.00
R2153:Gda UTSW 19 21,374,869 (GRCm39) critical splice donor site probably null
R3951:Gda UTSW 19 21,449,809 (GRCm39) missense probably benign 0.27
R4707:Gda UTSW 19 21,405,992 (GRCm39) missense probably benign 0.00
R5620:Gda UTSW 19 21,374,908 (GRCm39) missense probably damaging 1.00
R7186:Gda UTSW 19 21,372,569 (GRCm39) missense probably benign 0.12
R7386:Gda UTSW 19 21,387,250 (GRCm39) missense probably benign 0.04
R7408:Gda UTSW 19 21,405,988 (GRCm39) missense probably damaging 1.00
R8315:Gda UTSW 19 21,394,435 (GRCm39) missense probably benign 0.00
R8743:Gda UTSW 19 21,377,952 (GRCm39) missense probably damaging 1.00
R8846:Gda UTSW 19 21,389,889 (GRCm39) missense probably damaging 1.00
R9711:Gda UTSW 19 21,400,449 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CTGCAGTGAGAGAAAGTGCC -3'
(R):5'- ATGCCAGGCCTTGTTGATAC -3'

Sequencing Primer
(F):5'- TGCTATAGAATCCACCAGGCTGAG -3'
(R):5'- AGGCCTTGTTGATACCCACATC -3'
Posted On 2016-10-24