Incidental Mutation 'R5559:Or51f1'
| ID |
436459 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or51f1
|
| Ensembl Gene |
ENSMUSG00000060888 |
| Gene Name |
olfactory receptor family 51 subfamily F member 1 |
| Synonyms |
MOR14-7P, Olfr566, GA_x6K02T2PBJ9-5560696-5559746 |
| MMRRC Submission |
043116-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.063)
|
| Stock # |
R5559 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
102505528-102507972 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 102506414 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Glycine to Aspartic acid
at position 25
(G25D)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000148998
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000071393]
[ENSMUST00000209952]
[ENSMUST00000213481]
|
| AlphaFold |
A0A1B0GST0 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000071393
AA Change: G22D
PolyPhen 2
Score 0.899 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000071344
Gene: ENSMUSG00000060888
AA Change: G22D
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
37 |
316 |
1e-110 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
42 |
313 |
3.5e-6 |
PFAM |
|
Pfam:7tm_1
|
47 |
298 |
9.3e-22 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000209952
AA Change: G25D
PolyPhen 2
Score 0.941 (Sensitivity: 0.80; Specificity: 0.94)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000210522
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000213481
AA Change: G25D
PolyPhen 2
Score 0.941 (Sensitivity: 0.80; Specificity: 0.94)
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.3%
- 20x: 94.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2310034C09Rik |
G |
T |
16: 88,555,981 (GRCm39) |
R65L |
unknown |
Het |
| Abcc5 |
A |
T |
16: 20,157,636 (GRCm39) |
M1307K |
probably damaging |
Het |
| Anapc1 |
A |
T |
2: 128,522,354 (GRCm39) |
C129* |
probably null |
Het |
| Brd10 |
A |
C |
19: 29,694,363 (GRCm39) |
F1710C |
possibly damaging |
Het |
| Brox |
A |
T |
1: 183,073,552 (GRCm39) |
S39R |
possibly damaging |
Het |
| Ccdc168 |
C |
G |
1: 44,097,675 (GRCm39) |
R1141T |
possibly damaging |
Het |
| Cd109 |
T |
C |
9: 78,568,250 (GRCm39) |
V310A |
probably benign |
Het |
| Chd9 |
G |
A |
8: 91,742,553 (GRCm39) |
|
probably null |
Het |
| Chmp2b |
A |
T |
16: 65,337,316 (GRCm39) |
I170N |
probably damaging |
Het |
| Cnp |
G |
T |
11: 100,467,243 (GRCm39) |
G62V |
probably damaging |
Het |
| Dcp2 |
C |
A |
18: 44,538,554 (GRCm39) |
P206T |
probably damaging |
Het |
| Dhx57 |
A |
T |
17: 80,561,808 (GRCm39) |
V902E |
possibly damaging |
Het |
| Dmwd |
G |
A |
7: 18,814,363 (GRCm39) |
V338M |
probably damaging |
Het |
| Eva1c |
A |
G |
16: 90,701,139 (GRCm39) |
D258G |
probably benign |
Het |
| Flvcr2 |
T |
A |
12: 85,851,181 (GRCm39) |
F448L |
probably benign |
Het |
| Garin5b |
A |
G |
7: 4,761,449 (GRCm39) |
V421A |
probably damaging |
Het |
| Gchfr |
C |
T |
2: 119,000,187 (GRCm39) |
H23Y |
probably benign |
Het |
| Helz2 |
T |
A |
2: 180,871,919 (GRCm39) |
M2617L |
probably damaging |
Het |
| Ighv5-9-1 |
A |
T |
12: 113,699,745 (GRCm39) |
Y122* |
probably null |
Het |
| Lrrtm3 |
A |
G |
10: 63,766,045 (GRCm39) |
I514T |
probably benign |
Het |
| Nolc1 |
GAGCAGCAGCAGCAGCAGCAGCAGCAGC |
GAGCAGCAGCAGCAGCAGCAGCAGC |
19: 46,071,594 (GRCm39) |
|
probably benign |
Het |
| Obox5 |
A |
T |
7: 15,491,522 (GRCm39) |
I21F |
probably benign |
Het |
| P2rx2 |
T |
C |
5: 110,488,427 (GRCm39) |
I376V |
possibly damaging |
Het |
| Poli |
A |
G |
18: 70,642,356 (GRCm39) |
S529P |
probably benign |
Het |
| Ruvbl1 |
T |
C |
6: 88,450,078 (GRCm39) |
I83T |
possibly damaging |
Het |
| Rwdd2a |
T |
C |
9: 86,456,483 (GRCm39) |
S220P |
probably damaging |
Het |
| Serpinb9h |
T |
A |
13: 33,588,301 (GRCm39) |
D295E |
probably benign |
Het |
| Sf3b3 |
A |
T |
8: 111,564,847 (GRCm39) |
D320E |
probably benign |
Het |
| Slc6a21 |
C |
A |
7: 44,937,853 (GRCm39) |
L390I |
possibly damaging |
Het |
| Smarcd1 |
T |
G |
15: 99,601,176 (GRCm39) |
|
probably null |
Het |
| Sp1 |
T |
A |
15: 102,317,365 (GRCm39) |
S295T |
probably benign |
Het |
| Tas2r104 |
T |
A |
6: 131,662,094 (GRCm39) |
H205L |
probably damaging |
Het |
| Tmem69 |
C |
G |
4: 116,410,388 (GRCm39) |
G194A |
probably damaging |
Het |
| Unc5c |
G |
T |
3: 141,509,548 (GRCm39) |
C676F |
probably damaging |
Het |
| Unkl |
A |
G |
17: 25,424,687 (GRCm39) |
N52S |
probably benign |
Het |
| Vmn1r233 |
T |
C |
17: 21,214,839 (GRCm39) |
Y37C |
possibly damaging |
Het |
| Vmn1r57 |
A |
G |
7: 5,223,898 (GRCm39) |
N141S |
probably damaging |
Het |
| Vmn2r50 |
T |
C |
7: 9,771,253 (GRCm39) |
Y816C |
probably damaging |
Het |
| Vmn2r51 |
T |
A |
7: 9,826,128 (GRCm39) |
S540C |
probably damaging |
Het |
|
| Other mutations in Or51f1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02295:Or51f1
|
APN |
7 |
102,506,031 (GRCm39) |
missense |
probably benign |
|
|
IGL03336:Or51f1
|
APN |
7 |
102,505,823 (GRCm39) |
missense |
probably benign |
0.38 |
|
PIT4382001:Or51f1
|
UTSW |
7 |
102,505,809 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1337:Or51f1
|
UTSW |
7 |
102,506,078 (GRCm39) |
missense |
probably benign |
0.03 |
|
R1791:Or51f1
|
UTSW |
7 |
102,505,569 (GRCm39) |
nonsense |
probably null |
|
|
R3953:Or51f1
|
UTSW |
7 |
102,505,824 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R3954:Or51f1
|
UTSW |
7 |
102,505,824 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R3955:Or51f1
|
UTSW |
7 |
102,505,824 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R3957:Or51f1
|
UTSW |
7 |
102,505,824 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4734:Or51f1
|
UTSW |
7 |
102,506,186 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5182:Or51f1
|
UTSW |
7 |
102,506,176 (GRCm39) |
missense |
probably benign |
0.07 |
|
R5394:Or51f1
|
UTSW |
7 |
102,505,686 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6023:Or51f1
|
UTSW |
7 |
102,506,169 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6310:Or51f1
|
UTSW |
7 |
102,506,412 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7312:Or51f1
|
UTSW |
7 |
102,505,706 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7493:Or51f1
|
UTSW |
7 |
102,506,278 (GRCm39) |
nonsense |
probably null |
|
|
R8409:Or51f1
|
UTSW |
7 |
102,506,477 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8476:Or51f1
|
UTSW |
7 |
102,506,152 (GRCm39) |
missense |
probably benign |
0.22 |
|
R8747:Or51f1
|
UTSW |
7 |
102,506,139 (GRCm39) |
missense |
probably benign |
0.05 |
|
R8946:Or51f1
|
UTSW |
7 |
102,505,725 (GRCm39) |
nonsense |
probably null |
|
|
R9382:Or51f1
|
UTSW |
7 |
102,506,014 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9610:Or51f1
|
UTSW |
7 |
102,506,147 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9611:Or51f1
|
UTSW |
7 |
102,506,147 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9625:Or51f1
|
UTSW |
7 |
102,505,636 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9800:Or51f1
|
UTSW |
7 |
102,506,093 (GRCm39) |
missense |
probably benign |
0.14 |
|
Z1177:Or51f1
|
UTSW |
7 |
102,505,581 (GRCm39) |
missense |
probably benign |
0.03 |
|
| Predicted Primers |
PCR Primer
(F):5'- AGTCAAACCCAGGTCAGTGG -3'
(R):5'- GCCTGGACATCTTTAAGTAGGC -3'
Sequencing Primer
(F):5'- ACCCAGGTCAGTGGCAGAG -3'
(R):5'- GGCTTCTATTGATCACTTTAAACCTG -3'
|
| Posted On |
2016-10-24 |
Incidental Mutation