Incidental Mutation 'R5586:Synj1'
| ID |
438770 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Synj1
|
| Ensembl Gene |
ENSMUSG00000022973 |
| Gene Name |
synaptojanin 1 |
| Synonyms |
A930006D20Rik |
| MMRRC Submission |
043140-MU
|
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
R5586 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
16 |
| Chromosomal Location |
90732980-90808196 bp(-) (GRCm39) |
| Type of Mutation |
intron |
| DNA Base Change (assembly) |
A to T
at 90806865 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000128997
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000118522]
[ENSMUST00000121759]
[ENSMUST00000130813]
[ENSMUST00000170853]
|
| AlphaFold |
no structure available at present |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000023698
|
| SMART Domains |
Protein: ENSMUSP00000023698
Gene: ENSMUSG00000022974
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
5 |
27 |
N/A |
INTRINSIC |
|
low complexity region
|
51 |
57 |
N/A |
INTRINSIC |
|
low complexity region
|
60 |
86 |
N/A |
INTRINSIC |
|
low complexity region
|
123 |
136 |
N/A |
INTRINSIC |
|
low complexity region
|
195 |
208 |
N/A |
INTRINSIC |
|
low complexity region
|
434 |
444 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000118246
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000118390
|
| SMART Domains |
Protein: ENSMUSP00000113518
Gene: ENSMUSG00000022973
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
1 |
15 |
N/A |
INTRINSIC |
|
Pfam:Syja_N
|
75 |
356 |
3.1e-71 |
PFAM |
|
IPPc
|
546 |
889 |
6.37e-177 |
SMART |
|
DUF1866
|
882 |
1024 |
1.24e-80 |
SMART |
|
low complexity region
|
1040 |
1069 |
N/A |
INTRINSIC |
|
low complexity region
|
1117 |
1151 |
N/A |
INTRINSIC |
|
low complexity region
|
1155 |
1166 |
N/A |
INTRINSIC |
|
low complexity region
|
1189 |
1208 |
N/A |
INTRINSIC |
|
low complexity region
|
1289 |
1322 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000118522
|
| SMART Domains |
Protein: ENSMUSP00000113835
Gene: ENSMUSG00000022974
| Domain | Start | End | E-Value | Type |
|---|
|
coiled coil region
|
3 |
28 |
N/A |
INTRINSIC |
|
low complexity region
|
114 |
120 |
N/A |
INTRINSIC |
|
low complexity region
|
123 |
149 |
N/A |
INTRINSIC |
|
low complexity region
|
186 |
199 |
N/A |
INTRINSIC |
|
low complexity region
|
258 |
271 |
N/A |
INTRINSIC |
|
low complexity region
|
525 |
546 |
N/A |
INTRINSIC |
|
Pfam:GCFC
|
597 |
812 |
5.1e-39 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000121759
|
| SMART Domains |
Protein: ENSMUSP00000113308
Gene: ENSMUSG00000022973
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
9 |
40 |
N/A |
INTRINSIC |
|
Pfam:Syja_N
|
100 |
381 |
4.2e-71 |
PFAM |
|
IPPc
|
571 |
914 |
6.37e-177 |
SMART |
|
DUF1866
|
907 |
1049 |
1.24e-80 |
SMART |
|
low complexity region
|
1065 |
1094 |
N/A |
INTRINSIC |
|
low complexity region
|
1142 |
1176 |
N/A |
INTRINSIC |
|
low complexity region
|
1180 |
1191 |
N/A |
INTRINSIC |
|
low complexity region
|
1214 |
1233 |
N/A |
INTRINSIC |
|
low complexity region
|
1314 |
1343 |
N/A |
INTRINSIC |
|
Blast:IPPc
|
1344 |
1428 |
1e-17 |
BLAST |
|
low complexity region
|
1564 |
1596 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000125902
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000130813
|
| SMART Domains |
Protein: ENSMUSP00000119712
Gene: ENSMUSG00000022973
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Syja_N
|
59 |
346 |
1.4e-86 |
PFAM |
|
low complexity region
|
441 |
459 |
N/A |
INTRINSIC |
|
IPPc
|
526 |
693 |
1.8e-9 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000156140
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000154854
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000170853
|
| SMART Domains |
Protein: ENSMUSP00000128997
Gene: ENSMUSG00000022973
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Syja_N
|
59 |
346 |
1.7e-85 |
PFAM |
|
IPPc
|
531 |
874 |
6.37e-177 |
SMART |
|
DUF1866
|
867 |
1009 |
1.24e-80 |
SMART |
|
low complexity region
|
1025 |
1054 |
N/A |
INTRINSIC |
|
low complexity region
|
1102 |
1136 |
N/A |
INTRINSIC |
|
low complexity region
|
1140 |
1151 |
N/A |
INTRINSIC |
|
low complexity region
|
1174 |
1193 |
N/A |
INTRINSIC |
|
low complexity region
|
1274 |
1307 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.6%
- 20x: 96.0%
|
| Validation Efficiency |
98% (101/103) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a phosphoinositide phosphatase that regulates levels of membrane phosphatidylinositol-4,5-bisphosphate. As such, expression of this enzyme may affect synaptic transmission and membrane trafficking. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]
PHENOTYPE: Homozygotes for a targeted null mutation exhibit neurological defects associated with impaired phosphoinositide metabolism and accumulation of clathrin-coated vesicles at nerve endings. Mutants show impaired suckling and most die within 24 hours of birth. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 92 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4930432E11Rik |
A |
G |
7: 29,277,153 (GRCm39) |
|
noncoding transcript |
Het |
| Aaas |
A |
T |
15: 102,255,111 (GRCm39) |
|
probably null |
Het |
| Abcc3 |
G |
A |
11: 94,255,247 (GRCm39) |
R600W |
probably damaging |
Het |
| Abhd13 |
A |
T |
8: 10,038,318 (GRCm39) |
Q305L |
probably benign |
Het |
| Adcy5 |
A |
T |
16: 34,977,486 (GRCm39) |
I340F |
probably damaging |
Het |
| Adgrl3 |
T |
A |
5: 81,871,994 (GRCm39) |
I964N |
probably damaging |
Het |
| Anks1b |
T |
A |
10: 89,912,926 (GRCm39) |
H316Q |
probably damaging |
Het |
| Ap3d1 |
A |
T |
10: 80,554,964 (GRCm39) |
F454I |
possibly damaging |
Het |
| Apol7c |
T |
C |
15: 77,410,599 (GRCm39) |
R116G |
possibly damaging |
Het |
| Arhgap5 |
A |
G |
12: 52,566,695 (GRCm39) |
E1222G |
possibly damaging |
Het |
| AW551984 |
A |
G |
9: 39,502,559 (GRCm39) |
V673A |
probably benign |
Het |
| Baiap2l1 |
A |
G |
5: 144,218,949 (GRCm39) |
S220P |
probably damaging |
Het |
| Bcl6 |
A |
G |
16: 23,791,926 (GRCm39) |
F143L |
probably benign |
Het |
| Calb1 |
A |
T |
4: 15,900,811 (GRCm39) |
T165S |
probably benign |
Het |
| Ccdc66 |
C |
A |
14: 27,228,668 (GRCm39) |
G6C |
probably damaging |
Het |
| Ccdc88a |
A |
G |
11: 29,453,484 (GRCm39) |
I344V |
probably benign |
Het |
| Cdh19 |
T |
A |
1: 110,857,587 (GRCm39) |
D249V |
probably damaging |
Het |
| Ces1c |
T |
A |
8: 93,854,227 (GRCm39) |
T103S |
probably benign |
Het |
| Cfap54 |
T |
A |
10: 92,808,473 (GRCm39) |
K1401* |
probably null |
Het |
| Copa |
T |
A |
1: 171,932,789 (GRCm39) |
N371K |
probably damaging |
Het |
| Cyp2b10 |
A |
T |
7: 25,616,437 (GRCm39) |
Y348F |
probably damaging |
Het |
| Dennd5a |
T |
C |
7: 109,504,928 (GRCm39) |
R861G |
possibly damaging |
Het |
| Dhx8 |
T |
C |
11: 101,623,862 (GRCm39) |
|
probably benign |
Het |
| Dido1 |
C |
T |
2: 180,301,445 (GRCm39) |
W2153* |
probably null |
Het |
| Dlgap1 |
T |
A |
17: 71,125,156 (GRCm39) |
V969D |
probably damaging |
Het |
| Dvl3 |
A |
G |
16: 20,336,039 (GRCm39) |
D32G |
probably damaging |
Het |
| Epdr1 |
T |
C |
13: 19,778,718 (GRCm39) |
D24G |
probably benign |
Het |
| Etnk2 |
T |
A |
1: 133,307,043 (GRCm39) |
|
probably null |
Het |
| Fhad1 |
C |
T |
4: 141,632,442 (GRCm39) |
M1232I |
probably benign |
Het |
| Gcnt2 |
A |
C |
13: 41,014,429 (GRCm39) |
E200A |
probably damaging |
Het |
| Gm5174 |
A |
G |
10: 86,492,409 (GRCm39) |
|
noncoding transcript |
Het |
| Gm6408 |
T |
A |
5: 146,421,267 (GRCm39) |
F299I |
possibly damaging |
Het |
| Gpr85 |
G |
T |
6: 13,836,000 (GRCm39) |
Y301* |
probably null |
Het |
| Gucy2e |
G |
T |
11: 69,117,082 (GRCm39) |
P780T |
probably damaging |
Het |
| Icam5 |
A |
T |
9: 20,946,116 (GRCm39) |
N316I |
probably damaging |
Het |
| Ifit1bl1 |
C |
T |
19: 34,571,677 (GRCm39) |
R260Q |
probably damaging |
Het |
| Il1r1 |
A |
C |
1: 40,264,411 (GRCm39) |
|
probably benign |
Het |
| Kif3c |
A |
T |
12: 3,439,656 (GRCm39) |
I86F |
probably benign |
Het |
| Klhdc2 |
A |
G |
12: 69,354,467 (GRCm39) |
|
probably null |
Het |
| Mast2 |
A |
G |
4: 116,292,760 (GRCm39) |
L9P |
probably damaging |
Het |
| Mcoln1 |
G |
T |
8: 3,560,389 (GRCm39) |
C316F |
probably damaging |
Het |
| Mon1a |
A |
T |
9: 107,775,894 (GRCm39) |
D4V |
probably damaging |
Het |
| Ms4a18 |
T |
A |
19: 10,991,038 (GRCm39) |
M19L |
probably benign |
Het |
| Nbea |
T |
C |
3: 55,539,392 (GRCm39) |
K2790E |
probably benign |
Het |
| Niban1 |
C |
T |
1: 151,593,307 (GRCm39) |
T664I |
probably benign |
Het |
| Noc3l |
C |
T |
19: 38,803,139 (GRCm39) |
E167K |
possibly damaging |
Het |
| Nol10 |
G |
A |
12: 17,466,829 (GRCm39) |
E570K |
possibly damaging |
Het |
| Nr2e3 |
T |
C |
9: 59,856,484 (GRCm39) |
R69G |
probably damaging |
Het |
| Obscn |
G |
A |
11: 58,892,294 (GRCm39) |
R1358* |
probably null |
Het |
| Or14j4 |
A |
T |
17: 37,921,145 (GRCm39) |
F166I |
probably damaging |
Het |
| Or2b7 |
C |
A |
13: 21,739,266 (GRCm39) |
V309F |
probably damaging |
Het |
| Or52e8b |
A |
G |
7: 104,673,428 (GRCm39) |
I253T |
probably damaging |
Het |
| Or5b117 |
A |
T |
19: 13,431,746 (GRCm39) |
M45K |
probably benign |
Het |
| Pak2 |
A |
T |
16: 31,860,337 (GRCm39) |
D175E |
probably benign |
Het |
| Pccb |
C |
T |
9: 100,867,856 (GRCm39) |
V357I |
possibly damaging |
Het |
| Pcdhb4 |
C |
T |
18: 37,442,034 (GRCm39) |
P448L |
probably damaging |
Het |
| Pcdhb9 |
A |
G |
18: 37,534,167 (GRCm39) |
M54V |
probably benign |
Het |
| Ppp3cb |
A |
G |
14: 20,570,758 (GRCm39) |
|
probably benign |
Het |
| Ppp4r1 |
A |
G |
17: 66,131,563 (GRCm39) |
D452G |
probably benign |
Het |
| Pramel18 |
T |
A |
4: 101,767,317 (GRCm39) |
F189I |
probably benign |
Het |
| Prmt3 |
T |
A |
7: 49,476,499 (GRCm39) |
D369E |
probably damaging |
Het |
| Psmd12 |
T |
A |
11: 107,377,301 (GRCm39) |
V120D |
probably benign |
Het |
| Ptprb |
T |
C |
10: 116,189,732 (GRCm39) |
L1797P |
probably damaging |
Het |
| Ptprm |
A |
G |
17: 67,227,191 (GRCm39) |
S653P |
probably damaging |
Het |
| Pxdn |
T |
A |
12: 30,053,141 (GRCm39) |
V926D |
probably damaging |
Het |
| Retreg3 |
T |
G |
11: 100,997,165 (GRCm39) |
Q105P |
probably damaging |
Het |
| Sacs |
A |
T |
14: 61,443,890 (GRCm39) |
R1979* |
probably null |
Het |
| Scn2a |
T |
A |
2: 65,537,639 (GRCm39) |
L696* |
probably null |
Het |
| Sema3c |
A |
T |
5: 17,916,422 (GRCm39) |
N465Y |
probably damaging |
Het |
| Slc25a32 |
A |
T |
15: 38,963,308 (GRCm39) |
V171E |
possibly damaging |
Het |
| Slc30a7 |
C |
T |
3: 115,783,700 (GRCm39) |
V158I |
probably benign |
Het |
| Slc44a5 |
G |
A |
3: 153,975,802 (GRCm39) |
|
probably benign |
Het |
| Slc4a8 |
A |
G |
15: 100,685,045 (GRCm39) |
D140G |
probably damaging |
Het |
| Slc7a11 |
G |
A |
3: 50,397,532 (GRCm39) |
S60L |
possibly damaging |
Het |
| Spryd3 |
A |
T |
15: 102,040,372 (GRCm39) |
H59Q |
probably benign |
Het |
| Sqstm1 |
T |
C |
11: 50,093,849 (GRCm39) |
D256G |
probably damaging |
Het |
| Sst |
A |
T |
16: 23,708,487 (GRCm39) |
S115T |
probably damaging |
Het |
| Stimate |
A |
G |
14: 30,592,776 (GRCm39) |
K166E |
probably damaging |
Het |
| Surf1 |
T |
C |
2: 26,805,963 (GRCm39) |
|
probably benign |
Het |
| Tet1 |
C |
A |
10: 62,714,073 (GRCm39) |
C574F |
probably damaging |
Het |
| Thnsl1 |
T |
A |
2: 21,217,201 (GRCm39) |
Y318* |
probably null |
Het |
| Tomm70a |
A |
G |
16: 56,942,493 (GRCm39) |
E90G |
probably damaging |
Het |
| Treml4 |
A |
G |
17: 48,571,927 (GRCm39) |
D110G |
probably damaging |
Het |
| Ttn |
A |
T |
2: 76,641,587 (GRCm39) |
L5176Q |
possibly damaging |
Het |
| Txnl1 |
C |
T |
18: 63,797,396 (GRCm39) |
G283D |
probably damaging |
Het |
| Uba6 |
T |
C |
5: 86,282,906 (GRCm39) |
D559G |
probably damaging |
Het |
| Usp4 |
T |
C |
9: 108,233,661 (GRCm39) |
V94A |
possibly damaging |
Het |
| Vmn2r25 |
A |
C |
6: 123,802,255 (GRCm39) |
C549W |
probably damaging |
Het |
| Vmn2r59 |
G |
T |
7: 41,695,105 (GRCm39) |
Q436K |
probably benign |
Het |
| Wdr70 |
A |
T |
15: 7,913,769 (GRCm39) |
Y627N |
possibly damaging |
Het |
| Xpr1 |
T |
C |
1: 155,188,609 (GRCm39) |
I344V |
probably benign |
Het |
| Zfp423 |
T |
A |
8: 88,585,968 (GRCm39) |
Q61L |
possibly damaging |
Het |
|
| Other mutations in Synj1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01143:Synj1
|
APN |
16 |
90,748,864 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01468:Synj1
|
APN |
16 |
90,807,060 (GRCm39) |
splice site |
probably benign |
|
|
IGL02209:Synj1
|
APN |
16 |
90,784,307 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL02452:Synj1
|
APN |
16 |
90,758,253 (GRCm39) |
splice site |
probably benign |
|
|
IGL02619:Synj1
|
APN |
16 |
90,770,933 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02650:Synj1
|
APN |
16 |
90,773,584 (GRCm39) |
missense |
probably benign |
0.03 |
|
IGL02708:Synj1
|
APN |
16 |
90,788,350 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02863:Synj1
|
APN |
16 |
90,758,322 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL03131:Synj1
|
APN |
16 |
90,785,056 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL03295:Synj1
|
APN |
16 |
90,735,318 (GRCm39) |
missense |
probably benign |
0.14 |
|
IGL03356:Synj1
|
APN |
16 |
90,784,280 (GRCm39) |
missense |
probably damaging |
1.00 |
|
PIT1430001:Synj1
|
UTSW |
16 |
90,761,396 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0179:Synj1
|
UTSW |
16 |
90,761,519 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R0396:Synj1
|
UTSW |
16 |
90,735,528 (GRCm39) |
missense |
probably benign |
|
|
R0426:Synj1
|
UTSW |
16 |
90,764,242 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0486:Synj1
|
UTSW |
16 |
90,735,151 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R0515:Synj1
|
UTSW |
16 |
90,790,910 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R0535:Synj1
|
UTSW |
16 |
90,744,975 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R0697:Synj1
|
UTSW |
16 |
90,757,503 (GRCm39) |
missense |
probably benign |
0.44 |
|
R0698:Synj1
|
UTSW |
16 |
90,757,503 (GRCm39) |
missense |
probably benign |
0.44 |
|
R0945:Synj1
|
UTSW |
16 |
90,757,333 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1327:Synj1
|
UTSW |
16 |
90,743,743 (GRCm39) |
missense |
probably benign |
0.05 |
|
R1562:Synj1
|
UTSW |
16 |
90,784,290 (GRCm39) |
missense |
probably benign |
0.09 |
|
R1732:Synj1
|
UTSW |
16 |
90,761,118 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1752:Synj1
|
UTSW |
16 |
90,735,361 (GRCm39) |
missense |
probably benign |
|
|
R1785:Synj1
|
UTSW |
16 |
90,761,405 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1786:Synj1
|
UTSW |
16 |
90,761,405 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2011:Synj1
|
UTSW |
16 |
90,735,584 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2012:Synj1
|
UTSW |
16 |
90,735,584 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2065:Synj1
|
UTSW |
16 |
90,788,537 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R2862:Synj1
|
UTSW |
16 |
90,766,217 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3026:Synj1
|
UTSW |
16 |
90,775,622 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3151:Synj1
|
UTSW |
16 |
90,757,514 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R3946:Synj1
|
UTSW |
16 |
90,806,984 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R3971:Synj1
|
UTSW |
16 |
90,788,491 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4472:Synj1
|
UTSW |
16 |
90,766,069 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4547:Synj1
|
UTSW |
16 |
90,785,170 (GRCm39) |
missense |
possibly damaging |
0.51 |
|
R4647:Synj1
|
UTSW |
16 |
90,770,877 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4739:Synj1
|
UTSW |
16 |
90,752,307 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5027:Synj1
|
UTSW |
16 |
90,737,407 (GRCm39) |
splice site |
probably null |
|
|
R5428:Synj1
|
UTSW |
16 |
90,788,406 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R5769:Synj1
|
UTSW |
16 |
90,735,141 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R6005:Synj1
|
UTSW |
16 |
90,766,174 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6119:Synj1
|
UTSW |
16 |
90,735,877 (GRCm39) |
missense |
probably benign |
0.30 |
|
R6313:Synj1
|
UTSW |
16 |
90,743,703 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6324:Synj1
|
UTSW |
16 |
90,735,518 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6549:Synj1
|
UTSW |
16 |
90,735,565 (GRCm39) |
missense |
probably benign |
|
|
R6696:Synj1
|
UTSW |
16 |
90,757,340 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6698:Synj1
|
UTSW |
16 |
90,757,340 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6861:Synj1
|
UTSW |
16 |
90,760,768 (GRCm39) |
nonsense |
probably null |
|
|
R7008:Synj1
|
UTSW |
16 |
90,790,833 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7153:Synj1
|
UTSW |
16 |
90,744,978 (GRCm39) |
missense |
probably benign |
0.04 |
|
R7393:Synj1
|
UTSW |
16 |
90,748,887 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7510:Synj1
|
UTSW |
16 |
90,735,565 (GRCm39) |
missense |
probably benign |
|
|
R7560:Synj1
|
UTSW |
16 |
90,737,371 (GRCm39) |
missense |
probably benign |
|
|
R7724:Synj1
|
UTSW |
16 |
90,758,387 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7913:Synj1
|
UTSW |
16 |
90,788,315 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R8326:Synj1
|
UTSW |
16 |
90,785,084 (GRCm39) |
missense |
probably benign |
0.12 |
|
R8707:Synj1
|
UTSW |
16 |
90,752,319 (GRCm39) |
missense |
probably benign |
0.02 |
|
R8711:Synj1
|
UTSW |
16 |
90,806,971 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R8767:Synj1
|
UTSW |
16 |
90,758,406 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8911:Synj1
|
UTSW |
16 |
90,775,622 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9052:Synj1
|
UTSW |
16 |
90,735,728 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9124:Synj1
|
UTSW |
16 |
90,735,513 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9307:Synj1
|
UTSW |
16 |
90,785,095 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9408:Synj1
|
UTSW |
16 |
90,741,740 (GRCm39) |
missense |
probably benign |
0.27 |
|
R9458:Synj1
|
UTSW |
16 |
90,766,200 (GRCm39) |
missense |
probably benign |
0.05 |
|
R9567:Synj1
|
UTSW |
16 |
90,790,912 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
R9651:Synj1
|
UTSW |
16 |
90,757,343 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R9651:Synj1
|
UTSW |
16 |
90,735,412 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9707:Synj1
|
UTSW |
16 |
90,758,300 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R9730:Synj1
|
UTSW |
16 |
90,757,552 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9732:Synj1
|
UTSW |
16 |
90,761,414 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Synj1
|
UTSW |
16 |
90,784,228 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- AACAGGAGATGCAAGCTGTC -3'
(R):5'- ACTTGGTTTCCACAGGGCTG -3'
Sequencing Primer
(F):5'- ACAGGAGATGCAAGCTGTCTTATTG -3'
(R):5'- ACAGGGCTGCCTCTGAAG -3'
|
| Posted On |
2016-10-26 |
Incidental Mutation