Incidental Mutation 'R5640:Cyp3a16'
ID 440599
Institutional Source Beutler Lab
Gene Symbol Cyp3a16
Ensembl Gene ENSMUSG00000038656
Gene Name cytochrome P450, family 3, subfamily a, polypeptide 16
Synonyms
MMRRC Submission 043289-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.189) question?
Stock # R5640 (G1)
Quality Score 225
Status Not validated
Chromosome 5
Chromosomal Location 145373119-145406533 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 145389633 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Valine at position 244 (D244V)
Ref Sequence ENSEMBL: ENSMUSP00000031633 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000031633]
AlphaFold Q64481
Predicted Effect possibly damaging
Transcript: ENSMUST00000031633
AA Change: D244V

PolyPhen 2 Score 0.935 (Sensitivity: 0.80; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000031633
Gene: ENSMUSG00000038656
AA Change: D244V

DomainStartEndE-ValueType
low complexity region 3 22 N/A INTRINSIC
Pfam:p450 38 494 5.5e-132 PFAM
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.8%
  • 10x: 97.5%
  • 20x: 95.7%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 62 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Ace A G 11: 105,861,511 (GRCm39) Y220C probably damaging Het
Actl6a A G 3: 32,772,199 (GRCm39) T170A probably damaging Het
Adamts8 T C 9: 30,867,796 (GRCm39) V540A probably benign Het
Aga T C 8: 53,964,919 (GRCm39) L27P probably damaging Het
Agmat T A 4: 141,483,134 (GRCm39) H189Q probably damaging Het
Alx3 C A 3: 107,507,977 (GRCm39) T162K probably damaging Het
Armc2 T A 10: 41,887,894 (GRCm39) I30L possibly damaging Het
Atp10d T G 5: 72,404,552 (GRCm39) Y487D probably damaging Het
Atp13a4 C T 16: 29,234,649 (GRCm39) M908I probably damaging Het
B4galt2 T G 4: 117,731,195 (GRCm39) N322T probably benign Het
Bmal1 C T 7: 112,907,888 (GRCm39) P530L probably damaging Het
Brdt A T 5: 107,507,174 (GRCm39) K525* probably null Het
Ccdc168 T C 1: 44,101,087 (GRCm39) I4V probably benign Het
Ces3a T A 8: 105,778,377 (GRCm39) M246K probably benign Het
Chd9 T A 8: 91,763,190 (GRCm39) H2338Q probably damaging Het
Dhrs9 C A 2: 69,224,822 (GRCm39) A170E probably damaging Het
Dlg5 T C 14: 24,220,529 (GRCm39) N550D probably damaging Het
Dnah8 C T 17: 31,022,082 (GRCm39) T3894I probably damaging Het
Dpys T C 15: 39,705,462 (GRCm39) H217R probably damaging Het
Dpysl2 C T 14: 67,071,817 (GRCm39) V108I probably benign Het
Eprs1 A G 1: 185,106,381 (GRCm39) T199A probably benign Het
Fads1 A G 19: 10,163,767 (GRCm39) D183G probably damaging Het
Fam110b T G 4: 5,798,689 (GRCm39) Y36D probably damaging Het
Fbxl21 G A 13: 56,685,194 (GRCm39) D407N probably benign Het
Fuca2 G A 10: 13,383,174 (GRCm39) probably null Het
Gnas C A 2: 174,126,764 (GRCm39) R100S probably benign Het
Gse1 A G 8: 121,289,416 (GRCm39) H90R possibly damaging Het
Hoxc10 G T 15: 102,875,702 (GRCm39) C137F probably benign Het
Ipp T G 4: 116,377,886 (GRCm39) L252R possibly damaging Het
Jmjd1c T A 10: 67,061,857 (GRCm39) S1403R probably benign Het
Kif19a A G 11: 114,670,041 (GRCm39) M79V probably benign Het
Lipo4 T C 19: 33,478,986 (GRCm39) T285A possibly damaging Het
Lrrc66 A T 5: 73,765,977 (GRCm39) D355E probably benign Het
Lrsam1 T A 2: 32,835,864 (GRCm39) Q301L probably benign Het
Med6 C T 12: 81,628,628 (GRCm39) R138Q probably damaging Het
Nlrc5 A G 8: 95,202,421 (GRCm39) T174A probably benign Het
Nrbp1 C T 5: 31,406,929 (GRCm39) R322W possibly damaging Het
Or10ak14 T A 4: 118,610,986 (GRCm39) T250S probably benign Het
Or11g24 C A 14: 50,662,111 (GRCm39) A45D probably benign Het
Or4a47 T A 2: 89,666,282 (GRCm39) E2D probably benign Het
Pde3a A G 6: 141,429,641 (GRCm39) E734G probably damaging Het
Pgap6 C T 17: 26,337,846 (GRCm39) T410I possibly damaging Het
Pnpla7 C T 2: 24,893,013 (GRCm39) T167I possibly damaging Het
Pop7 T C 5: 137,500,321 (GRCm39) N4S possibly damaging Het
Ppm1h C A 10: 122,618,183 (GRCm39) P114Q probably benign Het
Prdm16 T C 4: 154,426,367 (GRCm39) T473A probably benign Het
Prdm6 T C 18: 53,669,813 (GRCm39) probably null Het
Prkdc T G 16: 15,647,633 (GRCm39) W3686G possibly damaging Het
Ptchd4 C A 17: 42,814,026 (GRCm39) H642Q possibly damaging Het
Rad1 A G 15: 10,496,009 (GRCm39) Y228C possibly damaging Het
Rgs22 G A 15: 36,107,101 (GRCm39) T56I probably benign Het
Rnf135 C A 11: 80,084,733 (GRCm39) H169N probably benign Het
Rnft1 C T 11: 86,377,319 (GRCm39) Q128* probably null Het
Sez6 T C 11: 77,864,585 (GRCm39) probably benign Het
Sh3rf3 A G 10: 58,649,769 (GRCm39) S125G probably benign Het
Sik2 T C 9: 50,826,806 (GRCm39) E295G possibly damaging Het
Themis A G 10: 28,739,372 (GRCm39) Q614R probably damaging Het
Thsd7b T A 1: 130,044,408 (GRCm39) C1129* probably null Het
Tmem68 A T 4: 3,569,512 (GRCm39) F59L probably benign Het
Vmn2r107 A G 17: 20,595,426 (GRCm39) T660A probably damaging Het
Vwa5b2 G T 16: 20,416,292 (GRCm39) C484F probably damaging Het
Zfp418 T A 7: 7,184,980 (GRCm39) C314* probably null Het
Other mutations in Cyp3a16
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01386:Cyp3a16 APN 5 145,377,244 (GRCm39) missense probably damaging 0.98
IGL01964:Cyp3a16 APN 5 145,392,372 (GRCm39) missense probably benign 0.41
IGL02007:Cyp3a16 APN 5 145,378,758 (GRCm39) splice site probably benign
IGL02139:Cyp3a16 APN 5 145,392,290 (GRCm39) missense probably benign 0.10
IGL02177:Cyp3a16 APN 5 145,386,964 (GRCm39) missense probably benign 0.43
IGL02407:Cyp3a16 APN 5 145,388,652 (GRCm39) missense probably damaging 0.99
IGL02473:Cyp3a16 APN 5 145,377,304 (GRCm39) missense possibly damaging 0.54
polywog UTSW 5 145,404,280 (GRCm39) nonsense probably null
R0363:Cyp3a16 UTSW 5 145,392,689 (GRCm39) splice site probably benign
R0556:Cyp3a16 UTSW 5 145,392,790 (GRCm39) missense probably benign 0.37
R0557:Cyp3a16 UTSW 5 145,406,398 (GRCm39) missense unknown
R0636:Cyp3a16 UTSW 5 145,399,895 (GRCm39) missense probably benign 0.03
R0749:Cyp3a16 UTSW 5 145,392,987 (GRCm39) critical splice acceptor site probably null
R0788:Cyp3a16 UTSW 5 145,401,886 (GRCm39) missense probably benign 0.00
R1552:Cyp3a16 UTSW 5 145,373,346 (GRCm39) missense probably benign 0.01
R1575:Cyp3a16 UTSW 5 145,373,267 (GRCm39) missense probably benign 0.01
R1580:Cyp3a16 UTSW 5 145,378,885 (GRCm39) missense probably damaging 1.00
R1580:Cyp3a16 UTSW 5 145,378,884 (GRCm39) missense possibly damaging 0.94
R1642:Cyp3a16 UTSW 5 145,406,399 (GRCm39) missense unknown
R1763:Cyp3a16 UTSW 5 145,401,841 (GRCm39) critical splice donor site probably null
R2029:Cyp3a16 UTSW 5 145,388,667 (GRCm39) missense probably damaging 0.96
R2144:Cyp3a16 UTSW 5 145,392,894 (GRCm39) missense probably damaging 1.00
R2409:Cyp3a16 UTSW 5 145,377,177 (GRCm39) missense probably benign 0.01
R2473:Cyp3a16 UTSW 5 145,392,404 (GRCm39) missense possibly damaging 0.79
R2860:Cyp3a16 UTSW 5 145,392,309 (GRCm39) nonsense probably null
R2861:Cyp3a16 UTSW 5 145,392,309 (GRCm39) nonsense probably null
R3747:Cyp3a16 UTSW 5 145,378,881 (GRCm39) missense probably damaging 1.00
R4654:Cyp3a16 UTSW 5 145,373,267 (GRCm39) missense probably benign 0.01
R4781:Cyp3a16 UTSW 5 145,392,922 (GRCm39) missense possibly damaging 0.85
R4873:Cyp3a16 UTSW 5 145,389,659 (GRCm39) missense probably benign 0.01
R4875:Cyp3a16 UTSW 5 145,389,659 (GRCm39) missense probably benign 0.01
R4925:Cyp3a16 UTSW 5 145,389,644 (GRCm39) missense probably benign 0.00
R5365:Cyp3a16 UTSW 5 145,389,597 (GRCm39) missense probably damaging 1.00
R5496:Cyp3a16 UTSW 5 145,404,341 (GRCm39) missense probably damaging 1.00
R5761:Cyp3a16 UTSW 5 145,378,843 (GRCm39) missense possibly damaging 0.79
R6401:Cyp3a16 UTSW 5 145,377,174 (GRCm39) missense probably damaging 1.00
R6526:Cyp3a16 UTSW 5 145,392,705 (GRCm39) missense probably benign 0.01
R6528:Cyp3a16 UTSW 5 145,377,241 (GRCm39) missense probably damaging 1.00
R7000:Cyp3a16 UTSW 5 145,399,980 (GRCm39) critical splice acceptor site probably null
R7268:Cyp3a16 UTSW 5 145,404,280 (GRCm39) nonsense probably null
R7630:Cyp3a16 UTSW 5 145,373,120 (GRCm39) splice site probably null
R7938:Cyp3a16 UTSW 5 145,389,666 (GRCm39) missense probably benign 0.00
R8827:Cyp3a16 UTSW 5 145,387,008 (GRCm39) missense probably benign 0.38
R9040:Cyp3a16 UTSW 5 145,392,922 (GRCm39) missense possibly damaging 0.85
R9137:Cyp3a16 UTSW 5 145,406,413 (GRCm39) missense unknown
R9139:Cyp3a16 UTSW 5 145,406,434 (GRCm39) missense unknown
R9140:Cyp3a16 UTSW 5 145,406,434 (GRCm39) missense unknown
R9284:Cyp3a16 UTSW 5 145,377,304 (GRCm39) missense probably damaging 1.00
R9657:Cyp3a16 UTSW 5 145,386,979 (GRCm39) missense probably null 1.00
R9680:Cyp3a16 UTSW 5 145,389,690 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TTAAAACTCCAACTTCTCCTCCATGAG -3'
(R):5'- TATGGTGCTGACCCAGTGTG -3'

Sequencing Primer
(F):5'- CACACAGCCTACATGTTC -3'
(R):5'- TGACCCAGTGTGAGCAAGTTC -3'
Posted On 2016-11-08