Incidental Mutation 'R5648:Gm10392'
ID 441281
Institutional Source Beutler Lab
Gene Symbol Gm10392
Ensembl Gene ENSMUSG00000072673
Gene Name predicted gene 10392
Synonyms
MMRRC Submission 043169-MU
Accession Numbers
Essential gene? Not available question?
Stock # R5648 (G1)
Quality Score 225
Status Not validated
Chromosome 11
Chromosomal Location 77407486-77410024 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 77408306 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 104 (D104E)
Ref Sequence ENSEMBL: ENSMUSP00000098370 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000060417] [ENSMUST00000094004] [ENSMUST00000100807]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000060417
SMART Domains Protein: ENSMUSP00000057592
Gene: ENSMUSG00000044328

DomainStartEndE-ValueType
signal peptide 1 27 N/A INTRINSIC
low complexity region 77 90 N/A INTRINSIC
low complexity region 130 139 N/A INTRINSIC
low complexity region 188 205 N/A INTRINSIC
low complexity region 222 236 N/A INTRINSIC
low complexity region 281 299 N/A INTRINSIC
transmembrane domain 303 325 N/A INTRINSIC
low complexity region 350 375 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000094004
SMART Domains Protein: ENSMUSP00000091541
Gene: ENSMUSG00000000686

DomainStartEndE-ValueType
signal peptide 1 28 N/A INTRINSIC
low complexity region 69 84 N/A INTRINSIC
low complexity region 226 239 N/A INTRINSIC
SCOP:d1din__ 319 411 8e-7 SMART
low complexity region 418 432 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000100807
AA Change: D104E

PolyPhen 2 Score 0.074 (Sensitivity: 0.93; Specificity: 0.85)
SMART Domains Protein: ENSMUSP00000098370
Gene: ENSMUSG00000072673
AA Change: D104E

DomainStartEndE-ValueType
low complexity region 4 19 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000124690
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126857
Predicted Effect probably benign
Transcript: ENSMUST00000136101
SMART Domains Protein: ENSMUSP00000122898
Gene: ENSMUSG00000044328

DomainStartEndE-ValueType
low complexity region 114 127 N/A INTRINSIC
low complexity region 167 176 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000139195
Predicted Effect probably benign
Transcript: ENSMUST00000145676
Predicted Effect probably benign
Transcript: ENSMUST00000147386
SMART Domains Protein: ENSMUSP00000116682
Gene: ENSMUSG00000000686

DomainStartEndE-ValueType
low complexity region 33 47 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.4%
  • 3x: 98.8%
  • 10x: 97.5%
  • 20x: 95.9%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca2 T C 2: 25,326,510 (GRCm39) probably null Het
Alpk2 A G 18: 65,482,988 (GRCm39) V340A probably damaging Het
Cald1 G T 6: 34,739,267 (GRCm39) probably null Het
Col24a1 C T 3: 145,064,321 (GRCm39) T702I probably benign Het
Ddx50 T C 10: 62,452,049 (GRCm39) R725G unknown Het
Dnah9 A T 11: 65,818,581 (GRCm39) F68L probably benign Het
Dnmt3b G A 2: 153,519,118 (GRCm39) V651M probably damaging Het
Dock1 G A 7: 134,348,683 (GRCm39) C299Y probably damaging Het
Epha4 T C 1: 77,375,162 (GRCm39) I562V probably benign Het
Esco2 A T 14: 66,068,641 (GRCm39) V223D probably damaging Het
Ggt6 T C 11: 72,326,542 (GRCm39) I33T possibly damaging Het
Gm9847 A G 12: 14,545,130 (GRCm39) noncoding transcript Het
Gnao1 A T 8: 94,676,070 (GRCm39) Y116F probably damaging Het
Gvin1 A T 7: 105,762,606 (GRCm39) I621K possibly damaging Het
Hyal6 T C 6: 24,734,235 (GRCm39) M56T possibly damaging Het
Hyou1 T A 9: 44,296,546 (GRCm39) D490E probably damaging Het
Igsf10 G C 3: 59,235,574 (GRCm39) Q1536E probably benign Het
Klk1b8 T C 7: 43,448,068 (GRCm39) S31P possibly damaging Het
Map3k6 A C 4: 132,970,646 (GRCm39) I178L probably benign Het
Mycbp2 T A 14: 103,528,778 (GRCm39) N427Y probably damaging Het
Ncr1 T A 7: 4,347,519 (GRCm39) I228N probably damaging Het
Nefh A T 11: 4,895,233 (GRCm39) Y319N probably damaging Het
Or4a80 A C 2: 89,582,417 (GRCm39) C252G probably damaging Het
Pakap T C 4: 57,854,848 (GRCm39) V120A probably damaging Het
Pcdhb18 G A 18: 37,623,537 (GRCm39) R289Q probably benign Het
Pkhd1 T A 1: 20,628,850 (GRCm39) Y699F probably benign Het
Plekhd1 T C 12: 80,767,362 (GRCm39) L250P probably damaging Het
Reln A G 5: 22,203,570 (GRCm39) V1228A probably benign Het
Rhobtb2 G T 14: 70,034,593 (GRCm39) R211S probably damaging Het
Rps6kb1 T C 11: 86,403,697 (GRCm39) I305V possibly damaging Het
Slc12a2 G A 18: 58,029,382 (GRCm39) G256E possibly damaging Het
Slc4a1ap A G 5: 31,708,129 (GRCm39) probably null Het
Thoc1 A G 18: 9,962,390 (GRCm39) T92A possibly damaging Het
Ticam1 TCACACA TCACA 17: 56,577,629 (GRCm39) probably null Het
Tmem117 T G 15: 94,992,653 (GRCm39) S438A possibly damaging Het
Ttll7 A G 3: 146,667,465 (GRCm39) N777S probably damaging Het
Ubd T A 17: 37,506,345 (GRCm39) V77E probably damaging Het
Ubqln3 A G 7: 103,790,117 (GRCm39) S658P probably damaging Het
Vmn1r78 G A 7: 11,886,693 (GRCm39) M101I possibly damaging Het
Wdr93 T C 7: 79,426,974 (GRCm39) C638R probably benign Het
Zfp983 T A 17: 21,877,947 (GRCm39) V50D probably damaging Het
Zhx3 A T 2: 160,623,881 (GRCm39) H95Q probably damaging Het
Other mutations in Gm10392
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01947:Gm10392 APN 11 77,408,306 (GRCm39) missense probably benign 0.07
IGL02454:Gm10392 APN 11 77,409,216 (GRCm39) missense probably damaging 1.00
IGL02710:Gm10392 APN 11 77,409,294 (GRCm39) missense possibly damaging 0.66
R1583:Gm10392 UTSW 11 77,408,307 (GRCm39) missense probably benign 0.07
R8772:Gm10392 UTSW 11 77,409,280 (GRCm39) missense possibly damaging 0.46
Predicted Primers PCR Primer
(F):5'- AATCTGGGGCTGGAAACTCAC -3'
(R):5'- ACCCTTTGCAATGAACTCATG -3'

Sequencing Primer
(F):5'- CACAATTCTAAGGTCAACTGTCAGGG -3'
(R):5'- TGCAATGAACTCATGACCTGTC -3'
Posted On 2016-11-08