Mutagenetix > Incidental Mutation

Incidental Mutation 'R5651:9930111J21Rik2'

441431

Institutional Source

Beutler Lab

Gene Symbol

9930111J21Rik2

Ensembl Gene

ENSMUSG00000069892

Gene Name

RIKEN cDNA 9930111J21 gene 2

Synonyms

MMRRC Submission

043297-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.215) question?

Stock #

R5651 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

48928487-48942069 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 48910700 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Tyrosine at position 578 (H578Y)

Ref Sequence

ENSEMBL: ENSMUSP00000098853 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000056759] [ENSMUST00000101295] [ENSMUST00000179282]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000056759

SMART Domains

Protein: ENSMUSP00000058544
Gene: ENSMUSG00000040328

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	4	227	5.7e-7	PFAM
Pfam:7tm_1	10	259	1.5e-33	PFAM
Pfam:7tm_4	108	252	1.7e-46	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000101295
AA Change: H578Y

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000098853
Gene: ENSMUSG00000069892
AA Change: H578Y

Domain	Start	End	E-Value	Type
Pfam:IIGP	36	398	2e-125	PFAM
Pfam:DLIC	52	107	3.2e-5	PFAM
Pfam:MMR_HSR1	72	235	2e-11	PFAM
low complexity region	430	444	N/A	INTRINSIC
Pfam:IIGP	447	820	2.3e-151	PFAM
Pfam:MMR_HSR1	483	607	5.2e-7	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000179282

SMART Domains

Protein: ENSMUSP00000136647
Gene: ENSMUSG00000040328

Domain	Start	End	E-Value	Type
Pfam:7tm_4	1	276	3.6e-51	PFAM
Pfam:7TM_GPCR_Srsx	4	227	5.7e-7	PFAM
Pfam:7tm_1	10	259	3.8e-26	PFAM

Coding Region Coverage

1x: 99.4%
3x: 98.8%
10x: 97.6%
20x: 96.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Atp11b	A	G	3: 35,909,289 (GRCm39)	D1161G	probably damaging	Het
Atp8b1	G	C	18: 64,664,453 (GRCm39)	I1238M	probably benign	Het
AY358078	T	A	14: 52,059,617 (GRCm39)	V318D	unknown	Het
B020004C17Rik	C	T	14: 57,252,689 (GRCm39)		probably benign	Het
Boc	T	A	16: 44,341,558 (GRCm39)	I16F	probably benign	Het
Brinp3	A	T	1: 146,577,537 (GRCm39)	T191S	probably benign	Het
Cald1	T	A	6: 34,739,255 (GRCm39)	N419K	probably damaging	Het
Cecr2	G	A	6: 120,732,521 (GRCm39)	G471D	probably damaging	Het
Cftr	T	A	6: 18,255,364 (GRCm39)		probably null	Het
Cyp2c38	T	A	19: 39,449,156 (GRCm39)	T66S	probably damaging	Het
Fbxo11	A	T	17: 88,323,136 (GRCm39)	D83E	probably benign	Het
Fshr	T	A	17: 89,293,257 (GRCm39)	M474L	possibly damaging	Het
Hhla1	T	A	15: 65,813,663 (GRCm39)	E223V	probably damaging	Het
Hnrnpa1	G	C	15: 103,148,955 (GRCm39)	E5D	possibly damaging	Het
Htr2a	T	A	14: 74,943,143 (GRCm39)	V241E	probably damaging	Het
Ier5	T	C	1: 154,974,491 (GRCm39)	E229G	possibly damaging	Het
Inka2	C	A	3: 105,623,748 (GRCm39)	Q22K	probably damaging	Het
Krt87	A	T	15: 101,331,910 (GRCm39)	M276K	possibly damaging	Het
Mast1	G	C	8: 85,655,597 (GRCm39)	Y182*	probably null	Het
Mia3	T	A	1: 183,139,998 (GRCm39)	D239V	probably damaging	Het
Mmut	T	A	17: 41,258,002 (GRCm39)	D389E	probably damaging	Het
Mpp7	A	G	18: 7,355,016 (GRCm39)		probably null	Het
Mycbp2	A	G	14: 103,520,101 (GRCm39)	C739R	probably null	Het
Or13e8	C	G	4: 43,696,636 (GRCm39)	C179S	probably damaging	Het
Or5k14	A	G	16: 58,692,847 (GRCm39)	L222P	probably damaging	Het
Or8k21	A	G	2: 86,144,784 (GRCm39)	I282T	probably benign	Het
Or9e1	A	T	11: 58,732,317 (GRCm39)	R126*	probably null	Het
Palld	A	T	8: 61,991,822 (GRCm39)	I510N	probably damaging	Het
Pappa	A	G	4: 65,074,589 (GRCm39)	E381G	probably damaging	Het
Phldb1	G	A	9: 44,623,200 (GRCm39)	T618I	probably damaging	Het
Pkd1	A	G	17: 24,810,361 (GRCm39)	E3631G	possibly damaging	Het
Pkhd1	C	T	1: 20,188,031 (GRCm39)	V3426I	probably benign	Het
Plk4	A	G	3: 40,767,940 (GRCm39)	T828A	probably benign	Het
Psmb5	C	T	14: 54,854,221 (GRCm39)	A86T	possibly damaging	Het
Rasal2	A	G	1: 156,984,951 (GRCm39)	V907A	probably damaging	Het
Rxra	C	T	2: 27,627,353 (GRCm39)	T24M	probably benign	Het
Senp1	A	G	15: 97,974,498 (GRCm39)	S105P	probably benign	Het
Sh3rf1	A	G	8: 61,816,201 (GRCm39)	D486G	probably damaging	Het
Slc49a4	G	A	16: 35,555,986 (GRCm39)	A158V	probably benign	Het
Slfn5	A	C	11: 82,851,490 (GRCm39)	N596H	probably benign	Het
Tanc2	T	A	11: 105,689,526 (GRCm39)	D229E	probably benign	Het
Taok2	T	C	7: 126,479,455 (GRCm39)	K57E	probably damaging	Het
Thsd7a	C	T	6: 12,343,212 (GRCm39)	C1135Y	probably damaging	Het
V1ra8	T	C	6: 90,180,508 (GRCm39)	L237P	probably benign	Het
Vcpip1	G	A	1: 9,818,065 (GRCm39)	T106M	probably damaging	Het
Vmn1r215	T	G	13: 23,259,981 (GRCm39)	I7S	possibly damaging	Het
Vmn1r233	T	A	17: 21,214,279 (GRCm39)	M224L	probably benign	Het
Xpot	A	T	10: 121,440,454 (GRCm39)	D592E	probably damaging	Het

Other mutations in 9930111J21Rik2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R1986:9930111J21Rik2	UTSW	11	48,910,119 (GRCm39)	missense	possibly damaging	0.83
R2023:9930111J21Rik2	UTSW	11	48,911,144 (GRCm39)	missense	probably benign	0.01
R2202:9930111J21Rik2	UTSW	11	48,910,149 (GRCm39)	missense	probably damaging	1.00
R2205:9930111J21Rik2	UTSW	11	48,910,149 (GRCm39)	missense	probably damaging	1.00
R2337:9930111J21Rik2	UTSW	11	48,911,131 (GRCm39)	missense	probably benign	0.01
R3709:9930111J21Rik2	UTSW	11	48,910,480 (GRCm39)	missense	probably damaging	1.00
R3716:9930111J21Rik2	UTSW	11	48,910,363 (GRCm39)	missense	probably damaging	0.96
R3738:9930111J21Rik2	UTSW	11	48,910,108 (GRCm39)	nonsense	probably null
R3739:9930111J21Rik2	UTSW	11	48,910,108 (GRCm39)	nonsense	probably null
R4034:9930111J21Rik2	UTSW	11	48,910,108 (GRCm39)	nonsense	probably null
R5413:9930111J21Rik2	UTSW	11	48,911,204 (GRCm39)	missense	possibly damaging	0.91
R5595:9930111J21Rik2	UTSW	11	48,910,538 (GRCm39)	missense	possibly damaging	0.95
R5611:9930111J21Rik2	UTSW	11	48,910,828 (GRCm39)	missense	possibly damaging	0.91
R5715:9930111J21Rik2	UTSW	11	48,910,777 (GRCm39)	missense	probably damaging	1.00
R6169:9930111J21Rik2	UTSW	11	48,910,088 (GRCm39)	splice site	probably null
R6218:9930111J21Rik2	UTSW	11	48,910,134 (GRCm39)	missense	probably benign	0.06
R6536:9930111J21Rik2	UTSW	11	48,910,550 (GRCm39)	missense	probably benign	0.03
R7186:9930111J21Rik2	UTSW	11	48,910,100 (GRCm39)	missense	possibly damaging	0.96
R7891:9930111J21Rik2	UTSW	11	48,910,543 (GRCm39)	missense	probably benign	0.11
R8056:9930111J21Rik2	UTSW	11	48,910,909 (GRCm39)	missense	probably benign	0.40
R8419:9930111J21Rik2	UTSW	11	48,910,312 (GRCm39)	missense	probably damaging	1.00
R8726:9930111J21Rik2	UTSW	11	48,910,507 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGAGCCTTCTGGAGATGACC -3'
(R):5'- TTTATCAATGCCTTGAGGGGAG -3'

Sequencing Primer
(F):5'- GATGACCTGAGCAGTCATCTC -3'
(R):5'- GTAGAGACAACCATGAAGAGAACTCC -3'

Posted On

2016-11-08