Incidental Mutation 'R0079:Tent4b'
ID 44193
Institutional Source Beutler Lab
Gene Symbol Tent4b
Ensembl Gene ENSMUSG00000036779
Gene Name terminal nucleotidyltransferase 4B
Synonyms 5730445M16Rik, Papd5
MMRRC Submission 038366-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.904) question?
Stock # R0079 (G1)
Quality Score 85
Status Not validated
Chromosome 8
Chromosomal Location 88925841-88986350 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 88926631 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Asparagine at position 14 (Y14N)
Ref Sequence ENSEMBL: ENSMUSP00000067971 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000066748] [ENSMUST00000118952] [ENSMUST00000119033]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000066748
AA Change: Y14N

PolyPhen 2 Score 0.861 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000067971
Gene: ENSMUSG00000036779
AA Change: Y14N

DomainStartEndE-ValueType
low complexity region 21 47 N/A INTRINSIC
low complexity region 83 117 N/A INTRINSIC
low complexity region 148 162 N/A INTRINSIC
Pfam:NTP_transf_2 206 315 1.6e-16 PFAM
Pfam:PAP_assoc 326 386 2.4e-18 PFAM
low complexity region 496 526 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000118952
AA Change: Y14N

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000112608
Gene: ENSMUSG00000036779
AA Change: Y14N

DomainStartEndE-ValueType
low complexity region 21 47 N/A INTRINSIC
low complexity region 83 117 N/A INTRINSIC
low complexity region 148 162 N/A INTRINSIC
Pfam:NTP_transf_2 206 317 1.1e-16 PFAM
Pfam:PAP_assoc 369 429 1.1e-17 PFAM
low complexity region 539 569 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000119033
AA Change: Y14N

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000112766
Gene: ENSMUSG00000036779
AA Change: Y14N

DomainStartEndE-ValueType
low complexity region 21 47 N/A INTRINSIC
low complexity region 83 117 N/A INTRINSIC
low complexity region 148 162 N/A INTRINSIC
Pfam:NTP_transf_2 206 318 4.6e-18 PFAM
Pfam:PAP_assoc 369 429 4.8e-17 PFAM
low complexity region 539 569 N/A INTRINSIC
Coding Region Coverage
  • 1x: 98.8%
  • 3x: 97.8%
  • 10x: 95.4%
  • 20x: 90.7%
Validation Efficiency 78% (155/199)
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2410004P03Rik T A 12: 17,057,183 (GRCm39) T105S possibly damaging Het
Abca13 G A 11: 9,243,493 (GRCm39) M1785I probably benign Het
Adamts3 G C 5: 89,840,912 (GRCm39) P804A probably benign Het
Ahrr G A 13: 74,431,143 (GRCm39) probably benign Het
Ank2 G T 3: 126,728,264 (GRCm39) D776E probably benign Het
Cep152 T A 2: 125,460,373 (GRCm39) K193M possibly damaging Het
Cep55 C T 19: 38,048,769 (GRCm39) L142F probably benign Het
Chd5 A G 4: 152,470,206 (GRCm39) Y1884C probably damaging Het
Clasp1 T C 1: 118,471,034 (GRCm39) L890P probably damaging Het
Cul9 C A 17: 46,848,589 (GRCm39) E716* probably null Het
Cytip T A 2: 58,050,006 (GRCm39) D21V probably benign Het
Denr T G 5: 124,062,908 (GRCm39) F137C probably damaging Het
Dhrs3 A T 4: 144,646,618 (GRCm39) S197C probably damaging Het
Egr4 A T 6: 85,489,751 (GRCm39) M103K probably damaging Het
Eif4enif1 C T 11: 3,192,676 (GRCm39) Q835* probably null Het
Gckr A G 5: 31,463,883 (GRCm39) I268V probably benign Het
Glt6d1 C A 2: 25,684,739 (GRCm39) probably null Het
Hpd T C 5: 123,319,544 (GRCm39) Y8C probably damaging Het
Il12rb2 A T 6: 67,338,889 (GRCm39) F16I probably benign Het
Ildr2 A T 1: 166,135,289 (GRCm39) Y347F probably damaging Het
Kcnv1 T C 15: 44,976,729 (GRCm39) D186G probably damaging Het
Khdrbs2 A G 1: 32,558,996 (GRCm39) probably null Het
L1cam G T X: 72,913,364 (GRCm39) P16H probably damaging Het
Lyn A G 4: 3,746,768 (GRCm39) H161R probably damaging Het
Mctp2 T A 7: 71,863,864 (GRCm39) probably benign Het
Miox C T 15: 89,220,477 (GRCm39) L189F possibly damaging Het
Mitf A C 6: 97,973,401 (GRCm39) M220L probably benign Het
Mrpl21 T C 19: 3,334,807 (GRCm39) Y50H possibly damaging Het
Myh1 T A 11: 67,104,237 (GRCm39) L968Q probably damaging Het
Myo3b A G 2: 69,925,502 (GRCm39) K18E possibly damaging Het
Ncoa6 TGC TGCGC 2: 155,250,211 (GRCm39) probably null Het
Nlrp2 T A 7: 5,330,729 (GRCm39) T556S possibly damaging Het
Nsmf T C 2: 24,949,096 (GRCm39) probably benign Het
Nsun7 C T 5: 66,452,856 (GRCm39) P558S probably benign Het
Or10h5 G A 17: 33,435,079 (GRCm39) R80C probably benign Het
Or1e34 T G 11: 73,778,563 (GRCm39) I212L probably benign Het
Or56a3 T C 7: 104,735,135 (GRCm39) S71P probably damaging Het
Or5d40 A T 2: 88,015,698 (GRCm39) Y159F possibly damaging Het
Phf19 T C 2: 34,785,966 (GRCm39) N501S probably benign Het
Ranbp17 A C 11: 33,450,682 (GRCm39) I85S probably damaging Het
Robo1 A G 16: 72,730,230 (GRCm39) probably benign Het
Sntg1 A G 1: 8,749,286 (GRCm39) probably benign Het
Snx15 A G 19: 6,173,943 (GRCm39) L58P probably damaging Het
Spink5 G T 18: 44,110,831 (GRCm39) C134F probably damaging Het
Strip2 T C 6: 29,920,532 (GRCm39) probably null Het
Taf1d C T 9: 15,221,240 (GRCm39) A182V probably benign Het
Tenm3 A G 8: 48,796,380 (GRCm39) V475A possibly damaging Het
Tgds A T 14: 118,353,647 (GRCm39) H223Q possibly damaging Het
Thoc2 G T X: 40,952,985 (GRCm39) S230Y probably benign Het
Tm9sf4 T A 2: 153,033,065 (GRCm39) V290E probably damaging Het
Trak2 A T 1: 58,965,883 (GRCm39) L97Q probably damaging Het
Trnau1ap A G 4: 132,041,656 (GRCm39) Y145H probably damaging Het
Vars2 A T 17: 35,970,048 (GRCm39) D780E probably damaging Het
Vmn1r170 T A 7: 23,305,735 (GRCm39) S46T possibly damaging Het
Vmn1r20 A T 6: 57,408,777 (GRCm39) R34S possibly damaging Het
Vmn1r28 G A 6: 58,242,702 (GRCm39) A182T probably benign Het
Wdr64 T C 1: 175,622,668 (GRCm39) M805T probably benign Het
Xdh G A 17: 74,198,213 (GRCm39) R1225C probably damaging Het
Zfp341 T A 2: 154,466,914 (GRCm39) Y94* probably null Het
Zfp641 T C 15: 98,186,970 (GRCm39) N218D probably benign Het
Zscan22 T C 7: 12,638,014 (GRCm39) probably null Het
Other mutations in Tent4b
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00502:Tent4b APN 8 88,978,886 (GRCm39) nonsense probably null
R0158:Tent4b UTSW 8 88,977,371 (GRCm39) missense probably damaging 1.00
R1175:Tent4b UTSW 8 88,978,635 (GRCm39) missense probably damaging 1.00
R1351:Tent4b UTSW 8 88,927,002 (GRCm39) nonsense probably null
R1381:Tent4b UTSW 8 88,969,937 (GRCm39) missense possibly damaging 0.95
R1541:Tent4b UTSW 8 88,972,227 (GRCm39) missense probably damaging 1.00
R1801:Tent4b UTSW 8 88,977,416 (GRCm39) missense probably benign 0.25
R1994:Tent4b UTSW 8 88,973,112 (GRCm39) missense probably damaging 1.00
R2013:Tent4b UTSW 8 88,972,223 (GRCm39) splice site probably null
R2290:Tent4b UTSW 8 88,978,603 (GRCm39) missense probably damaging 1.00
R3791:Tent4b UTSW 8 88,969,957 (GRCm39) missense probably damaging 1.00
R3845:Tent4b UTSW 8 88,977,292 (GRCm39) missense possibly damaging 0.60
R3886:Tent4b UTSW 8 88,927,043 (GRCm39) missense probably benign 0.03
R5041:Tent4b UTSW 8 88,981,878 (GRCm39) small deletion probably benign
R5253:Tent4b UTSW 8 88,926,651 (GRCm39) missense possibly damaging 0.63
R6881:Tent4b UTSW 8 88,977,416 (GRCm39) missense possibly damaging 0.91
R7792:Tent4b UTSW 8 88,979,182 (GRCm39) missense probably benign
R7936:Tent4b UTSW 8 88,978,913 (GRCm39) missense probably null 0.05
R8054:Tent4b UTSW 8 88,974,186 (GRCm39) missense probably damaging 1.00
R8997:Tent4b UTSW 8 88,979,023 (GRCm39) missense probably benign 0.12
R8998:Tent4b UTSW 8 88,977,350 (GRCm39) missense probably benign 0.09
X0024:Tent4b UTSW 8 88,973,103 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CATTTGCACGGGAACCCCGGTG -3'
(R):5'- TTGGTCGTCTCCAGGGGCAGGAAG -3'

Sequencing Primer
(F):5'- CAGGCTCCCTGCGCTAC -3'
(R):5'- AGGAAGTCCCGCTGCTC -3'
Posted On 2013-06-11