Incidental Mutation 'R5691:Riox1'
ID 443700
Institutional Source Beutler Lab
Gene Symbol Riox1
Ensembl Gene ENSMUSG00000046791
Gene Name ribosomal oxygenase 1
Synonyms NO66, 2410016O06Rik
MMRRC Submission 043324-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.140) question?
Stock # R5691 (G1)
Quality Score 225
Status Validated
Chromosome 12
Chromosomal Location 83997382-83999725 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 83998466 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Isoleucine at position 334 (T334I)
Ref Sequence ENSEMBL: ENSMUSP00000057984 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000053744] [ENSMUST00000164935]
AlphaFold Q9JJF3
Predicted Effect possibly damaging
Transcript: ENSMUST00000053744
AA Change: T334I

PolyPhen 2 Score 0.537 (Sensitivity: 0.88; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000057984
Gene: ENSMUSG00000046791
AA Change: T334I

DomainStartEndE-ValueType
low complexity region 15 22 N/A INTRINSIC
low complexity region 44 65 N/A INTRINSIC
JmjC 266 394 5.07e-3 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000164935
SMART Domains Protein: ENSMUSP00000129832
Gene: ENSMUSG00000090843

DomainStartEndE-ValueType
low complexity region 153 166 N/A INTRINSIC
low complexity region 261 272 N/A INTRINSIC
low complexity region 289 303 N/A INTRINSIC
low complexity region 533 548 N/A INTRINSIC
internal_repeat_1 577 711 2.78e-6 PROSPERO
Pfam:HEAT_2 776 890 1.8e-8 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000181399
SMART Domains Protein: ENSMUSP00000137697
Gene: ENSMUSG00000096953

DomainStartEndE-ValueType
low complexity region 1 19 N/A INTRINSIC
low complexity region 27 40 N/A INTRINSIC
low complexity region 47 60 N/A INTRINSIC
low complexity region 68 98 N/A INTRINSIC
low complexity region 117 161 N/A INTRINSIC
low complexity region 171 212 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000220615
Predicted Effect noncoding transcript
Transcript: ENSMUST00000221865
Predicted Effect noncoding transcript
Transcript: ENSMUST00000222424
Predicted Effect noncoding transcript
Transcript: ENSMUST00000223215
Meta Mutation Damage Score 0.1199 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.3%
Validation Efficiency 98% (60/61)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele activated in mesenchyme exhibit increased body length and weight, increased ossification with increased bone mass, bone mineral density, and volume, increased osteoblasts; and decrease osteoclasts. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 55 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2410022M11Rik A G 14: 57,049,830 (GRCm39) probably benign Het
Abcb5 A T 12: 118,890,970 (GRCm39) M509K probably damaging Het
Ap4m1 A G 5: 138,170,653 (GRCm39) Y34C probably damaging Het
Aqp7 G A 4: 41,035,510 (GRCm39) T115I probably benign Het
Bcl10 C T 3: 145,638,904 (GRCm39) T182I probably benign Het
Cdc123 T A 2: 5,827,986 (GRCm39) N87I probably benign Het
Cfap46 T C 7: 139,186,616 (GRCm39) E2431G possibly damaging Het
Dcc T C 18: 71,708,154 (GRCm39) T521A probably damaging Het
Defb46 T A 8: 19,292,149 (GRCm39) I55K probably benign Het
Dlgap4 A G 2: 156,546,390 (GRCm39) T353A probably benign Het
Eqtn C A 4: 94,811,965 (GRCm39) probably null Het
Ermn A T 2: 57,937,776 (GRCm39) M279K probably damaging Het
Fan1 C A 7: 64,004,118 (GRCm39) probably null Het
Fbxo17 G A 7: 28,436,897 (GRCm39) R284H probably damaging Het
Hectd4 A G 5: 121,486,878 (GRCm39) D3291G possibly damaging Het
Hid1 A G 11: 115,239,645 (GRCm39) W762R probably damaging Het
Idi2l A T 13: 8,992,693 (GRCm39) Y91* probably null Het
Ifi207 A G 1: 173,559,992 (GRCm39) I160T unknown Het
Inpp4b T A 8: 82,617,323 (GRCm39) probably benign Het
Iqcd C T 5: 120,740,571 (GRCm39) Q301* probably null Het
Jph1 T G 1: 17,074,587 (GRCm39) Q477P probably benign Het
Kdm4c A T 4: 74,252,965 (GRCm39) I511L probably benign Het
Lrp2 T C 2: 69,332,897 (GRCm39) D1540G probably damaging Het
Lrrc69 T A 4: 14,769,648 (GRCm39) I168F probably damaging Het
Mgat4e A T 1: 134,468,729 (GRCm39) probably benign Het
Mroh7 C A 4: 106,559,815 (GRCm39) G704V probably damaging Het
Nadsyn1 C T 7: 143,366,316 (GRCm39) probably null Het
Ncoa2 A T 1: 13,250,774 (GRCm39) C303S probably damaging Het
Nova1 T C 12: 46,863,738 (GRCm39) T71A unknown Het
Nrcam T C 12: 44,611,039 (GRCm39) Y554H probably damaging Het
Nubpl G A 12: 52,152,059 (GRCm39) probably benign Het
Oasl2 C A 5: 115,037,828 (GRCm39) T75K possibly damaging Het
Or8h9 A T 2: 86,789,616 (GRCm39) F62Y probably damaging Het
P3h3 C T 6: 124,832,116 (GRCm39) G257R probably damaging Het
Parp14 A G 16: 35,683,909 (GRCm39) V139A probably benign Het
Pgam5 G A 5: 110,414,959 (GRCm39) P85S probably damaging Het
Phpt1 T C 2: 25,463,707 (GRCm39) Y96C probably damaging Het
Plekhm2 A C 4: 141,355,600 (GRCm39) S867A possibly damaging Het
Pramel26 A T 4: 143,538,579 (GRCm39) W131R probably benign Het
Prss21 A G 17: 24,087,759 (GRCm39) probably null Het
Rabgap1l A T 1: 160,563,254 (GRCm39) Y108N probably damaging Het
Rps3a2 G T 14: 88,360,483 (GRCm39) noncoding transcript Het
Selenot C T 3: 58,493,447 (GRCm39) A108V probably benign Het
Setd3 A T 12: 108,126,544 (GRCm39) M98K probably benign Het
Slc22a27 T C 19: 7,904,035 (GRCm39) H34R possibly damaging Het
Slco1a8 A T 6: 141,940,581 (GRCm39) Y93* probably null Het
Sp3 A G 2: 72,801,803 (GRCm39) L70S probably damaging Het
Syne2 TCCAGGTAGGGCACACC TCC 12: 76,074,630 (GRCm39) probably null Het
Tcl1b4 C A 12: 105,168,806 (GRCm39) D23E possibly damaging Het
Tespa1 T A 10: 130,190,638 (GRCm39) probably null Het
Tmc7 T C 7: 118,141,116 (GRCm39) I672V probably benign Het
Trps1 T A 15: 50,690,700 (GRCm39) Q14L probably benign Het
Vmn2r73 A G 7: 85,507,299 (GRCm39) V671A probably damaging Het
Zfp106 G A 2: 120,354,952 (GRCm39) S1273F probably damaging Het
Zfp90 C A 8: 107,151,710 (GRCm39) Y474* probably null Het
Other mutations in Riox1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01141:Riox1 APN 12 83,998,568 (GRCm39) missense probably damaging 1.00
R1968:Riox1 UTSW 12 83,998,156 (GRCm39) missense probably damaging 1.00
R2158:Riox1 UTSW 12 83,997,709 (GRCm39) missense probably benign 0.00
R2395:Riox1 UTSW 12 83,997,418 (GRCm39) start gained probably null
R6396:Riox1 UTSW 12 83,998,087 (GRCm39) missense possibly damaging 0.88
R6968:Riox1 UTSW 12 83,998,147 (GRCm39) missense probably damaging 0.98
R7322:Riox1 UTSW 12 83,997,442 (GRCm39) unclassified probably benign
R7520:Riox1 UTSW 12 83,998,545 (GRCm39) nonsense probably null
R9133:Riox1 UTSW 12 83,998,221 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- AGGAGCAGTTTGGCAGCATG -3'
(R):5'- TTAGAGTCGGAATGCTGGGC -3'

Sequencing Primer
(F):5'- ATGGCGGGCTCCAACGTC -3'
(R):5'- TAATCCATGAAGTCTCGGGGC -3'
Posted On 2016-11-09