Incidental Mutation 'H8786:Cd200r4'
ID 44478
Institutional Source Beutler Lab
Gene Symbol Cd200r4
Ensembl Gene ENSMUSG00000062082
Gene Name CD200 receptor 4
Synonyms F630107N04Rik, MCD200RLa
Accession Numbers
Essential gene? Probably non essential (E-score: 0.048) question?
Stock # H8786 (G3) of strain 617
Quality Score 225
Status Not validated
Chromosome 16
Chromosomal Location 44632096-44659513 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 44653736 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 132 (T132A)
Ref Sequence ENSEMBL: ENSMUSP00000135162 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000114626] [ENSMUST00000176321] [ENSMUST00000176819]
AlphaFold Q6XJV4
Predicted Effect probably benign
Transcript: ENSMUST00000114626
AA Change: T178A

PolyPhen 2 Score 0.196 (Sensitivity: 0.92; Specificity: 0.87)
SMART Domains Protein: ENSMUSP00000110273
Gene: ENSMUSG00000062082
AA Change: T178A

DomainStartEndE-ValueType
signal peptide 1 25 N/A INTRINSIC
IG 44 147 1.23e-3 SMART
Blast:IG_like 149 270 2e-68 BLAST
Predicted Effect possibly damaging
Transcript: ENSMUST00000176321
AA Change: T132A

PolyPhen 2 Score 0.620 (Sensitivity: 0.87; Specificity: 0.91)
SMART Domains Protein: ENSMUSP00000135162
Gene: ENSMUSG00000062082
AA Change: T132A

DomainStartEndE-ValueType
IG 1 101 1.97e0 SMART
Blast:IG_like 103 224 6e-69 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000176819
AA Change: T178A

PolyPhen 2 Score 0.196 (Sensitivity: 0.92; Specificity: 0.87)
SMART Domains Protein: ENSMUSP00000135299
Gene: ENSMUSG00000062082
AA Change: T178A

DomainStartEndE-ValueType
signal peptide 1 25 N/A INTRINSIC
IG 44 147 1.23e-3 SMART
Blast:IG_like 149 270 2e-68 BLAST
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.7%
  • 3x: 99.0%
  • 10x: 97.4%
  • 20x: 95.3%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921504E06Rik A G 2: 19,498,905 (GRCm39) Y363H probably benign Het
4933402N03Rik T A 7: 130,740,906 (GRCm39) R103S probably damaging Het
Aars1 A G 8: 111,772,187 (GRCm39) D459G probably benign Het
Adam25 A T 8: 41,207,261 (GRCm39) M176L probably benign Het
Adcy5 A G 16: 35,087,551 (GRCm39) I471V probably damaging Het
Ano8 A T 8: 71,931,388 (GRCm39) probably benign Het
Arhgef28 T A 13: 98,083,461 (GRCm39) Q1136L probably damaging Het
Atp13a3 A T 16: 30,178,543 (GRCm39) C164* probably null Het
Avl9 G A 6: 56,734,295 (GRCm39) A625T probably damaging Het
Avpr1a A T 10: 122,285,373 (GRCm39) M222L probably benign Het
B4galnt4 A T 7: 140,651,235 (GRCm39) M939L probably damaging Het
B4galt6 A G 18: 20,822,001 (GRCm39) F331S probably benign Het
C2cd2 G T 16: 97,680,840 (GRCm39) Q325K possibly damaging Het
Caml T G 13: 55,776,409 (GRCm39) L216R probably damaging Het
Ces1h A C 8: 94,089,550 (GRCm39) V283G probably damaging Het
Clptm1 A T 7: 19,369,629 (GRCm39) V427D possibly damaging Het
Drd1 T A 13: 54,207,122 (GRCm39) N357I possibly damaging Het
Foxq1 C G 13: 31,743,441 (GRCm39) S181W probably damaging Het
Gfra2 C T 14: 71,215,818 (GRCm39) T169M possibly damaging Het
Gm42542 T C 6: 68,872,634 (GRCm39) probably null Het
Hoxa13 CGG CGNGG 6: 52,260,636 (GRCm38) probably null Het
Hsd11b1 C A 1: 192,922,560 (GRCm39) A166S probably benign Het
Kcnab3 T A 11: 69,219,093 (GRCm39) F101L probably damaging Het
Klf6 C A 13: 5,911,790 (GRCm39) H51Q probably damaging Het
Krtap4-8 G A 11: 99,670,898 (GRCm39) P191L unknown Het
Lrrk2 T A 15: 91,557,561 (GRCm39) N26K probably benign Het
Mrgprd T C 7: 144,876,004 (GRCm39) S292P probably benign Het
Ms4a8a A G 19: 11,053,725 (GRCm39) I127T possibly damaging Het
Myo7a T G 7: 97,744,985 (GRCm39) N280T possibly damaging Het
Nipal4 A G 11: 46,041,304 (GRCm39) F297S probably damaging Het
Npas1 A G 7: 16,195,275 (GRCm39) I351T possibly damaging Het
Or12k7 A G 2: 36,958,341 (GRCm39) E8G probably benign Het
Or4a72 C A 2: 89,405,623 (GRCm39) G149V probably damaging Het
Or9e1 A T 11: 58,732,146 (GRCm39) I69F probably benign Het
Parp11 A G 6: 127,448,598 (GRCm39) T72A probably damaging Het
Pik3c3 T C 18: 30,427,396 (GRCm39) V300A probably damaging Het
Pik3cb T C 9: 98,928,612 (GRCm39) E881G possibly damaging Het
Polr2h T A 16: 20,539,281 (GRCm39) L57* probably null Het
Rela T A 19: 5,697,046 (GRCm39) S418T probably benign Het
Rptn A G 3: 93,305,180 (GRCm39) T838A possibly damaging Het
Sez6l2 T A 7: 126,560,955 (GRCm39) N413K possibly damaging Het
Slc6a2 A G 8: 93,721,268 (GRCm39) I466V probably benign Het
Slco4c1 A T 1: 96,768,876 (GRCm39) C329S probably damaging Het
Sppl2c A G 11: 104,077,691 (GRCm39) M164V probably benign Het
Spta1 G A 1: 174,007,405 (GRCm39) V212M probably damaging Het
Sqor A C 2: 122,634,288 (GRCm39) I142L probably benign Het
Suco T C 1: 161,680,420 (GRCm39) E317G probably damaging Het
Tlk2 T A 11: 105,145,805 (GRCm39) I337N possibly damaging Het
Tln1 A T 4: 43,544,589 (GRCm39) N1113K probably damaging Het
Tmc2 A G 2: 130,068,182 (GRCm39) Y234C probably damaging Het
Tmem167 A C 13: 90,246,585 (GRCm39) K36N probably damaging Het
Trim72 T C 7: 127,603,963 (GRCm39) L103P probably damaging Het
Tut4 T C 4: 108,408,012 (GRCm39) probably null Het
Urb1 T A 16: 90,566,357 (GRCm39) M1477L probably benign Het
Vwa2 T A 19: 56,898,164 (GRCm39) M721K possibly damaging Het
Zfp143 T G 7: 109,693,575 (GRCm39) D636E probably damaging Het
Other mutations in Cd200r4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02996:Cd200r4 APN 16 44,653,396 (GRCm39) missense probably benign 0.08
IGL03328:Cd200r4 APN 16 44,653,882 (GRCm39) missense possibly damaging 0.91
H8562:Cd200r4 UTSW 16 44,653,736 (GRCm39) missense possibly damaging 0.62
R1163:Cd200r4 UTSW 16 44,658,383 (GRCm39) missense probably benign 0.03
R1168:Cd200r4 UTSW 16 44,653,307 (GRCm39) missense probably damaging 1.00
R1502:Cd200r4 UTSW 16 44,653,803 (GRCm39) missense probably damaging 1.00
R1536:Cd200r4 UTSW 16 44,653,412 (GRCm39) missense possibly damaging 0.95
R2237:Cd200r4 UTSW 16 44,641,260 (GRCm39) start codon destroyed probably null 1.00
R2239:Cd200r4 UTSW 16 44,641,260 (GRCm39) start codon destroyed probably null 1.00
R2899:Cd200r4 UTSW 16 44,653,728 (GRCm39) missense probably damaging 1.00
R3824:Cd200r4 UTSW 16 44,641,313 (GRCm39) missense probably benign 0.00
R3825:Cd200r4 UTSW 16 44,641,313 (GRCm39) missense probably benign 0.00
R4295:Cd200r4 UTSW 16 44,653,239 (GRCm39) missense probably damaging 0.99
R5254:Cd200r4 UTSW 16 44,652,453 (GRCm39) missense possibly damaging 0.86
R5683:Cd200r4 UTSW 16 44,653,311 (GRCm39) missense probably benign 0.01
R5979:Cd200r4 UTSW 16 44,653,295 (GRCm39) missense probably benign 0.14
R6531:Cd200r4 UTSW 16 44,653,868 (GRCm39) nonsense probably null
R7205:Cd200r4 UTSW 16 44,653,529 (GRCm39) missense probably damaging 1.00
R7583:Cd200r4 UTSW 16 44,653,784 (GRCm39) missense probably damaging 1.00
R8157:Cd200r4 UTSW 16 44,653,504 (GRCm39) missense probably damaging 1.00
R9576:Cd200r4 UTSW 16 44,658,338 (GRCm39) missense
R9739:Cd200r4 UTSW 16 44,641,142 (GRCm39) start gained probably benign
X0063:Cd200r4 UTSW 16 44,641,269 (GRCm39) missense possibly damaging 0.95
Predicted Primers PCR Primer
(F):5'- TCCAAGTGCTGGGTAAGTGACAATG -3'
(R):5'- GCAGGAGTCTGCTGAGCTAGAAAAC -3'

Sequencing Primer
(F):5'- CACATATTGTGCTATTTCACATTACC -3'
(R):5'- TGCTGAGCTAGAAAACAGCTTC -3'
Posted On 2013-06-11