Incidental Mutation 'R5793:Ly6g2'
ID 447095
Institutional Source Beutler Lab
Gene Symbol Ly6g2
Ensembl Gene ENSMUSG00000047728
Gene Name lymphocyte antigen 6 family member G2
Synonyms BC025446
MMRRC Submission 043208-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.057) question?
Stock # R5793 (G1)
Quality Score 225
Status Not validated
Chromosome 15
Chromosomal Location 75088227-75094510 bp(+) (GRCm39)
Type of Mutation utr 3 prime
DNA Base Change (assembly) T to C at 75093493 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000155184 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000055719] [ENSMUST00000185307] [ENSMUST00000229521]
AlphaFold A0A087WQT1
Predicted Effect unknown
Transcript: ENSMUST00000055719
AA Change: S122P
SMART Domains Protein: ENSMUSP00000053396
Gene: ENSMUSG00000047728
AA Change: S122P

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
LU 27 118 1.06e-27 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000185307
SMART Domains Protein: ENSMUSP00000140330
Gene: ENSMUSG00000047728

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
LU 27 118 5.3e-30 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000229521
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.4%
  • 20x: 95.7%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Alox12 C A 11: 70,133,879 (GRCm39) R522L probably benign Het
Arfgef1 A T 1: 10,279,753 (GRCm39) D271E probably benign Het
Arg1 C T 10: 24,796,540 (GRCm39) V96M probably benign Het
Axin1 T C 17: 26,362,282 (GRCm39) S209P probably damaging Het
B4galnt3 A G 6: 120,185,865 (GRCm39) probably null Het
Cdh23 T A 10: 60,141,907 (GRCm39) D3058V probably damaging Het
Chd9 A G 8: 91,728,384 (GRCm39) T794A probably damaging Het
Ckap5 C T 2: 91,450,180 (GRCm39) T1891I possibly damaging Het
Cspg4b G T 13: 113,457,556 (GRCm39) V1201L possibly damaging Het
Dzank1 T C 2: 144,348,144 (GRCm39) I207M probably benign Het
Fkbp9 G A 6: 56,850,498 (GRCm39) probably null Het
Gm4781 T A 10: 100,232,529 (GRCm39) noncoding transcript Het
Gprc5c G T 11: 114,755,093 (GRCm39) V257L possibly damaging Het
Gtpbp6 G A 5: 110,255,094 (GRCm39) L33F probably benign Het
Hsd11b1 A C 1: 192,924,492 (GRCm39) F27V probably damaging Het
Ift172 A T 5: 31,434,292 (GRCm39) I482N possibly damaging Het
Kcnma1 C T 14: 23,359,103 (GRCm39) probably null Het
Myh9 T C 15: 77,653,077 (GRCm39) Q1420R probably benign Het
Ncam2 G A 16: 81,372,991 (GRCm39) V569I possibly damaging Het
Nsd1 T C 13: 55,395,819 (GRCm39) V1140A probably benign Het
Ogdhl T A 14: 32,054,730 (GRCm39) L226Q probably damaging Het
Or51a24 T C 7: 103,734,237 (GRCm39) T17A probably benign Het
Orc2 T C 1: 58,536,547 (GRCm39) M1V probably null Het
Padi2 T C 4: 140,660,501 (GRCm39) L327P probably benign Het
Palb2 T C 7: 121,726,860 (GRCm39) N337D probably benign Het
Pard3b A T 1: 61,807,132 (GRCm39) H49L probably damaging Het
Pigz T C 16: 31,764,285 (GRCm39) S448P probably benign Het
Ppfia4 A G 1: 134,239,844 (GRCm39) V911A probably damaging Het
Prr5 T A 15: 84,656,223 (GRCm39) M408K probably benign Het
Qser1 T C 2: 104,593,205 (GRCm39) Y1604C probably damaging Het
Rpgrip1l A G 8: 91,987,400 (GRCm39) S886P probably benign Het
Sdk2 T C 11: 113,759,778 (GRCm39) I408V possibly damaging Het
Sema7a A T 9: 57,867,540 (GRCm39) R431W probably damaging Het
Slc22a30 T A 19: 8,314,183 (GRCm39) Y501F possibly damaging Het
Slitrk5 T A 14: 111,917,345 (GRCm39) V323D probably damaging Het
Snap47 C T 11: 59,329,018 (GRCm39) E95K probably damaging Het
Tbc1d9 A T 8: 83,998,069 (GRCm39) I1209F probably damaging Het
Tek T A 4: 94,708,333 (GRCm39) M297K probably benign Het
Tmem132e T A 11: 82,335,684 (GRCm39) I922N probably damaging Het
Tmx2 T C 2: 84,506,501 (GRCm39) R64G probably damaging Het
Trim68 A T 7: 102,333,560 (GRCm39) S41T possibly damaging Het
Tsga10 A T 1: 37,874,540 (GRCm39) M115K probably damaging Het
Ttc23l G T 15: 10,551,636 (GRCm39) T30K possibly damaging Het
Vmn2r84 C T 10: 130,221,754 (GRCm39) C822Y probably damaging Het
Wdr72 C T 9: 74,117,625 (GRCm39) A779V probably benign Het
Zfp580 A T 7: 5,055,891 (GRCm39) probably benign Het
Zfp772 G A 7: 7,207,283 (GRCm39) T136I probably benign Het
Other mutations in Ly6g2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02064:Ly6g2 APN 15 75,093,505 (GRCm39) utr 3 prime probably benign
R0084:Ly6g2 UTSW 15 75,089,624 (GRCm39) missense probably benign 0.01
R0764:Ly6g2 UTSW 15 75,092,572 (GRCm39) missense probably benign
R1736:Ly6g2 UTSW 15 75,089,569 (GRCm39) missense probably damaging 1.00
R1829:Ly6g2 UTSW 15 75,088,605 (GRCm39) critical splice donor site probably null
R5412:Ly6g2 UTSW 15 75,089,669 (GRCm39) missense probably damaging 0.98
R7434:Ly6g2 UTSW 15 75,088,567 (GRCm39) missense probably benign
R8007:Ly6g2 UTSW 15 75,088,552 (GRCm39) missense probably benign 0.00
R8479:Ly6g2 UTSW 15 75,089,626 (GRCm39) missense probably damaging 0.98
R9450:Ly6g2 UTSW 15 75,092,574 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CATTTCCTTCAGGAGCTCATGGC -3'
(R):5'- TTGGCCACATTCCTGGATCC -3'

Sequencing Primer
(F):5'- TGGCTTCACTCTGAGCAAAC -3'
(R):5'- GGATCCTATGCTTGTCCCAGAG -3'
Posted On 2016-12-15