Incidental Mutation 'R5827:Tmem200c'
ID450237
Institutional Source Beutler Lab
Gene Symbol Tmem200c
Ensembl Gene ENSMUSG00000095407
Gene Nametransmembrane protein 200C
SynonymsGm6338
MMRRC Submission 043218-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.104) question?
Stock #R5827 (G1)
Quality Score194
Status Not validated
Chromosome17
Chromosomal Location68837136-68843138 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 68842009 bp
ZygosityHeterozygous
Amino Acid Change Glutamic Acid to Glycine at position 529 (E529G)
Ref Sequence ENSEMBL: ENSMUSP00000137246 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000178545]
Predicted Effect probably benign
Transcript: ENSMUST00000178545
AA Change: E529G

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
SMART Domains Protein: ENSMUSP00000137246
Gene: ENSMUSG00000095407
AA Change: E529G

DomainStartEndE-ValueType
Pfam:DUF2371 14 209 4.1e-65 PFAM
SCOP:d1gkub1 227 258 2e-3 SMART
low complexity region 272 291 N/A INTRINSIC
low complexity region 347 377 N/A INTRINSIC
low complexity region 382 398 N/A INTRINSIC
low complexity region 473 486 N/A INTRINSIC
low complexity region 496 509 N/A INTRINSIC
low complexity region 538 550 N/A INTRINSIC
low complexity region 584 599 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.3%
  • 20x: 95.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca8b C A 11: 109,977,813 G175V probably damaging Het
Agl T C 3: 116,781,054 I34V probably damaging Het
Cavin4 A T 4: 48,672,074 D173V probably damaging Het
Chd9 A G 8: 90,989,450 D884G probably damaging Het
Col6a5 G A 9: 105,928,120 R1196* probably null Het
Disc1 T C 8: 125,135,365 L492P probably damaging Het
Dscam A G 16: 96,649,991 probably null Het
Fbxw4 T C 19: 45,579,657 T26A probably benign Het
Hist1h1t A G 13: 23,696,202 K113E possibly damaging Het
Klhl24 T A 16: 20,120,121 Y475* probably null Het
Map4k3 C T 17: 80,593,283 probably null Het
Mfsd6 T C 1: 52,662,392 E633G probably damaging Het
Mycn G A 12: 12,939,793 R201* probably null Het
Nek11 T C 9: 105,314,745 I155M probably damaging Het
Notch2 G A 3: 98,072,862 V231I possibly damaging Het
Npnt A C 3: 132,906,775 V187G possibly damaging Het
Nr1d2 C A 14: 18,222,248 V8L possibly damaging Het
Nup188 C T 2: 30,339,847 T1359I probably damaging Het
Olfr1029 C A 2: 85,975,306 P21Q probably benign Het
Olfr1277 A T 2: 111,269,921 W149R probably damaging Het
Olfr164 T A 16: 19,286,432 I104L probably benign Het
Olfr957 T A 9: 39,511,058 I221F probably damaging Het
P2rx2 C T 5: 110,340,329 R453Q probably benign Het
Pcdhb7 A G 18: 37,342,024 E71G probably benign Het
Pcdhb9 A T 18: 37,401,958 D335V possibly damaging Het
Pcsk9 C T 4: 106,448,947 G368R probably damaging Het
Ptgr2 G A 12: 84,295,336 probably null Het
Rhebl1 T A 15: 98,878,270 I168F probably damaging Het
Serpina3b A G 12: 104,130,777 T106A probably benign Het
Sh3pxd2b A G 11: 32,422,422 I530V probably benign Het
Skint10 T C 4: 112,746,775 T72A probably benign Het
Slx4 G T 16: 4,001,284 F8L possibly damaging Het
Tdp2 T C 13: 24,831,853 L41P probably damaging Het
Tiam2 A G 17: 3,448,489 I847V probably benign Het
Tnpo1 T C 13: 98,856,908 D590G probably damaging Het
Ube2cbp T C 9: 86,372,436 T331A possibly damaging Het
Ugt1a2 T A 1: 88,201,065 S143R probably damaging Het
Zfp58 A T 13: 67,491,293 C360S probably damaging Het
Other mutations in Tmem200c
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0360:Tmem200c UTSW 17 68840548 missense probably damaging 1.00
R0364:Tmem200c UTSW 17 68840548 missense probably damaging 1.00
R0599:Tmem200c UTSW 17 68840511 missense probably damaging 1.00
R0711:Tmem200c UTSW 17 68842254 missense probably damaging 1.00
R1311:Tmem200c UTSW 17 68840763 missense probably damaging 0.98
R1852:Tmem200c UTSW 17 68840617 missense probably damaging 1.00
R1951:Tmem200c UTSW 17 68840988 missense probably damaging 1.00
R1954:Tmem200c UTSW 17 68840961 missense probably damaging 1.00
R1955:Tmem200c UTSW 17 68840961 missense probably damaging 1.00
R2144:Tmem200c UTSW 17 68842249 missense possibly damaging 0.49
R2189:Tmem200c UTSW 17 68840686 missense probably damaging 0.98
R2397:Tmem200c UTSW 17 68840947 missense probably damaging 1.00
R4546:Tmem200c UTSW 17 68842171 missense probably benign
R4715:Tmem200c UTSW 17 68840470 missense probably damaging 1.00
R4752:Tmem200c UTSW 17 68842240 missense probably benign 0.05
R5214:Tmem200c UTSW 17 68841127 missense probably damaging 1.00
R5751:Tmem200c UTSW 17 68840552 missense probably damaging 1.00
R5989:Tmem200c UTSW 17 68837436 start gained probably benign
R6024:Tmem200c UTSW 17 68841727 missense possibly damaging 0.49
R6634:Tmem200c UTSW 17 68842106 missense probably benign 0.26
Predicted Primers PCR Primer
(F):5'- TGTACAGCATCTACCGCGAG -3'
(R):5'- CAGTACTGGGATCTGTAACATCC -3'

Sequencing Primer
(F):5'- AGAACTGGACCTGAGCCTGAC -3'
(R):5'- TGGGATCTGTAACATCCTCACAG -3'
Posted On2016-12-20