Incidental Mutation 'R5717:Frmd8'
ID451246
Institutional Source Beutler Lab
Gene Symbol Frmd8
Ensembl Gene ENSMUSG00000024816
Gene NameFERM domain containing 8
Synonyms
MMRRC Submission 043337-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.175) question?
Stock #R5717 (G1)
Quality Score225
Status Validated
Chromosome19
Chromosomal Location5849702-5875274 bp(-) (GRCm38)
Type of Mutationunclassified
DNA Base Change (assembly) G to T at 5873368 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000121596 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000025728] [ENSMUST00000025732] [ENSMUST00000125114] [ENSMUST00000145200] [ENSMUST00000155227] [ENSMUST00000155697]
Predicted Effect probably benign
Transcript: ENSMUST00000025728
SMART Domains Protein: ENSMUSP00000025728
Gene: ENSMUSG00000024816

DomainStartEndE-ValueType
B41 26 273 9.58e-4 SMART
low complexity region 383 398 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000025732
SMART Domains Protein: ENSMUSP00000025732
Gene: ENSMUSG00000024818

DomainStartEndE-ValueType
Pfam:Mito_carr 1 87 1.2e-20 PFAM
Pfam:Mito_carr 95 195 6.9e-22 PFAM
Pfam:Mito_carr 197 288 7e-23 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000125114
SMART Domains Protein: ENSMUSP00000122076
Gene: ENSMUSG00000024818

DomainStartEndE-ValueType
Pfam:Mito_carr 1 87 4.7e-22 PFAM
Pfam:Mito_carr 95 195 3.4e-23 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000145026
Predicted Effect probably benign
Transcript: ENSMUST00000145200
SMART Domains Protein: ENSMUSP00000117220
Gene: ENSMUSG00000024818

DomainStartEndE-ValueType
transmembrane domain 5 27 N/A INTRINSIC
Pfam:Mito_carr 37 137 5.1e-23 PFAM
Pfam:Mito_carr 139 195 4.1e-12 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000155227
SMART Domains Protein: ENSMUSP00000116453
Gene: ENSMUSG00000024816

DomainStartEndE-ValueType
low complexity region 16 32 N/A INTRINSIC
Pfam:FERM_M 136 202 9.6e-10 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000155697
SMART Domains Protein: ENSMUSP00000121596
Gene: ENSMUSG00000024818

DomainStartEndE-ValueType
Pfam:Mito_carr 1 87 8.9e-22 PFAM
Pfam:Mito_carr 95 195 6.8e-23 PFAM
Pfam:Mito_carr 197 288 2.4e-23 PFAM
Meta Mutation Damage Score 0.0616 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.1%
Validation Efficiency 98% (48/49)
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933411K16Rik A T 19: 42,053,045 H205L probably benign Het
Acss2 T C 2: 155,561,153 L617S probably damaging Het
Adgrl4 T C 3: 151,492,334 V77A probably benign Het
Adnp2 A G 18: 80,128,264 S977P probably benign Het
Ankrd11 T C 8: 122,892,638 K1492E possibly damaging Het
B4galt5 G A 2: 167,306,629 R190C probably damaging Het
Bbs1 A G 19: 4,897,326 V355A possibly damaging Het
Cenpj GTTTT GTTTTT 14: 56,553,521 probably null Het
Ckap2 T C 8: 22,175,047 E467G probably damaging Het
Cry1 A T 10: 85,146,416 H355Q probably damaging Het
Cspg4 G T 9: 56,885,798 M272I probably benign Het
Dicer1 T A 12: 104,705,128 Y961F probably damaging Het
Dirc2 A G 16: 35,719,429 F341L probably benign Het
Epha2 A T 4: 141,322,071 M689L probably benign Het
Foxc1 C T 13: 31,807,488 A94V probably benign Het
Fras1 T C 5: 96,781,737 V4000A possibly damaging Het
Gm5218 A G 15: 81,499,277 noncoding transcript Het
Gm7735 T C 16: 89,169,542 L18P unknown Het
Hr C T 14: 70,566,176 T808I probably benign Het
Hyal6 T C 6: 24,743,691 M462T probably benign Het
Igkv6-20 T A 6: 70,336,428 probably benign Het
Igkv8-27 T A 6: 70,171,934 T59S probably benign Het
Itga11 A G 9: 62,752,249 T428A probably benign Het
Klk1b16 A G 7: 44,139,489 I49V probably benign Het
Matn2 G T 15: 34,399,091 E375* probably null Het
Msgn1 T C 12: 11,208,518 Y144C probably damaging Het
Myh1 A G 11: 67,208,956 N564S probably benign Het
Mypn A G 10: 63,127,776 V972A probably damaging Het
Olfr1209 T C 2: 88,910,022 I124V possibly damaging Het
Olfr235 A G 19: 12,269,156 K309E probably benign Het
Olfr284 G A 15: 98,340,365 A208V probably benign Het
Ppp2r5d A G 17: 46,687,894 S81P probably damaging Het
Ptgis C T 2: 167,208,364 probably benign Het
Ptprr A G 10: 116,048,113 N25S probably benign Het
Rnf123 G A 9: 108,067,424 T456I probably damaging Het
Rpl6l T C 10: 111,126,023 noncoding transcript Het
Rps25 A G 9: 44,408,750 Y23C probably benign Het
Sec24a A G 11: 51,707,210 V879A probably benign Het
Sema6a G A 18: 47,249,263 A739V probably benign Het
Senp6 A T 9: 80,092,312 I4F probably damaging Het
Stoml3 A T 3: 53,505,516 Q197L probably damaging Het
Ttn T A 2: 76,747,747 K24267N probably damaging Het
Vmn1r43 T C 6: 89,869,923 S194G probably damaging Het
Vmn2r17 C T 5: 109,427,274 T149I possibly damaging Het
Wdr72 T A 9: 74,148,205 Y239N probably damaging Het
Zfp423 A T 8: 87,686,559 probably null Het
Zfp759 T A 13: 67,138,708 C114S probably damaging Het
Other mutations in Frmd8
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01771:Frmd8 APN 19 5869575 missense probably damaging 1.00
R0815:Frmd8 UTSW 19 5865056 unclassified probably benign
R1704:Frmd8 UTSW 19 5869482 missense probably benign 0.38
R2570:Frmd8 UTSW 19 5874712 missense probably damaging 1.00
R5489:Frmd8 UTSW 19 5852652 missense probably damaging 1.00
R5771:Frmd8 UTSW 19 5869450 missense probably benign 0.05
R6819:Frmd8 UTSW 19 5865180 missense probably benign 0.01
R6994:Frmd8 UTSW 19 5873181 missense probably damaging 1.00
R7018:Frmd8 UTSW 19 5869518 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CAGAGTGCAAAGGCCTCCAAAG -3'
(R):5'- TTTGAGGTCCTTGAAGGCAG -3'

Sequencing Primer
(F):5'- TCCAAAGCCACGTCTGGGAG -3'
(R):5'- GACTGCAGATGTATGTCAC -3'
Posted On2017-01-03