Mutagenetix > Incidental Mutation

Incidental Mutation 'R5860:Fat1'

453848

Institutional Source

Beutler Lab

Gene Symbol

Fat1

Ensembl Gene

ENSMUSG00000070047

Gene Name

FAT atypical cadherin 1

Synonyms

2310038E12Rik, mFat1, Fath

MMRRC Submission

044072-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R5860 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

45388484-45505294 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 45504166 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Alanine to Valine at position 4553 (A4553V)

Ref Sequence

ENSEMBL: ENSMUSP00000149194 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000098796] [ENSMUST00000189017] [ENSMUST00000191428] [ENSMUST00000215588]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000098796
AA Change: A4498V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000096394
Gene: ENSMUSG00000070047
AA Change: A4498V

Domain	Start	End	E-Value	Type
signal peptide	1	21	N/A	INTRINSIC
CA	62	148	3.05e-6	SMART
CA	172	256	3.29e-20	SMART
Blast:CA	277	382	5e-47	BLAST
CA	387	462	2.13e-5	SMART
CA	486	568	8.35e-22	SMART
CA	592	670	2.11e-2	SMART
CA	740	821	5.09e-26	SMART
CA	845	926	6.27e-26	SMART
CA	950	1031	4.07e-25	SMART
CA	1057	1138	5.13e-31	SMART
CA	1162	1244	8.79e-30	SMART
CA	1276	1351	2.06e-3	SMART
CA	1379	1456	1.63e-15	SMART
CA	1480	1562	3.29e-20	SMART
CA	1586	1667	2.34e-16	SMART
CA	1691	1765	1.16e-20	SMART
CA	1796	1879	6.27e-26	SMART
CA	1903	1979	1.47e-8	SMART
CA	2003	2081	2.65e-15	SMART
CA	2105	2181	2.14e-10	SMART
CA	2203	2283	9.82e-19	SMART
CA	2307	2390	7.54e-29	SMART
CA	2414	2492	3.29e-11	SMART
CA	2516	2596	6.48e-19	SMART
CA	2620	2703	3.48e-10	SMART
CA	2719	2809	2.26e-9	SMART
CA	2833	2918	8.08e-29	SMART
CA	2942	3023	5.99e-23	SMART
CA	3047	3125	2.63e-28	SMART
CA	3149	3230	2.79e-32	SMART
CA	3254	3335	5.25e-28	SMART
CA	3359	3440	4.46e-31	SMART
CA	3464	3545	1.25e-11	SMART
CA	3569	3641	5.67e-2	SMART
LamG	3853	3987	6.51e-36	SMART
EGF	4018	4052	8.57e-5	SMART
EGF	4057	4090	3.94e-4	SMART
EGF	4094	4127	4.29e-5	SMART
EGF_CA	4129	4165	1.81e-12	SMART
transmembrane domain	4182	4204	N/A	INTRINSIC
low complexity region	4308	4324	N/A	INTRINSIC
low complexity region	4436	4457	N/A	INTRINSIC
low complexity region	4472	4483	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000186342

Predicted Effect

probably benign
Transcript: ENSMUST00000189017
AA Change: A4510V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000189367

Predicted Effect

probably benign
Transcript: ENSMUST00000191428
AA Change: A4498V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000140596
Gene: ENSMUSG00000070047
AA Change: A4498V

Domain	Start	End	E-Value	Type
signal peptide	1	21	N/A	INTRINSIC
CA	62	148	3.05e-6	SMART
CA	172	256	3.29e-20	SMART
Blast:CA	277	382	5e-47	BLAST
CA	387	462	2.13e-5	SMART
CA	486	568	8.35e-22	SMART
CA	592	670	2.11e-2	SMART
CA	740	821	5.09e-26	SMART
CA	845	926	6.27e-26	SMART
CA	950	1031	4.07e-25	SMART
CA	1057	1138	5.13e-31	SMART
CA	1162	1244	8.79e-30	SMART
CA	1276	1351	2.06e-3	SMART
CA	1379	1456	1.63e-15	SMART
CA	1480	1562	3.29e-20	SMART
CA	1586	1667	2.34e-16	SMART
CA	1691	1765	1.16e-20	SMART
CA	1796	1879	6.27e-26	SMART
CA	1903	1979	1.47e-8	SMART
CA	2003	2081	2.65e-15	SMART
CA	2105	2181	2.14e-10	SMART
CA	2203	2283	9.82e-19	SMART
CA	2307	2390	7.54e-29	SMART
CA	2414	2492	3.29e-11	SMART
CA	2516	2596	6.48e-19	SMART
CA	2620	2703	3.48e-10	SMART
CA	2719	2809	2.26e-9	SMART
CA	2833	2918	8.08e-29	SMART
CA	2942	3023	5.99e-23	SMART
CA	3047	3125	2.63e-28	SMART
CA	3149	3230	2.79e-32	SMART
CA	3254	3335	5.25e-28	SMART
CA	3359	3440	4.46e-31	SMART
CA	3464	3545	1.25e-11	SMART
CA	3569	3641	5.67e-2	SMART
LamG	3853	3987	6.51e-36	SMART
EGF	4018	4052	8.57e-5	SMART
EGF	4057	4090	3.94e-4	SMART
EGF	4094	4127	4.29e-5	SMART
EGF_CA	4129	4165	1.81e-12	SMART
transmembrane domain	4182	4204	N/A	INTRINSIC
low complexity region	4308	4324	N/A	INTRINSIC
low complexity region	4436	4457	N/A	INTRINSIC
low complexity region	4472	4483	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000215588
AA Change: A4553V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

Coding Region Coverage

1x: 99.9%
3x: 99.4%
10x: 97.1%
20x: 90.8%

Validation Efficiency

97% (75/77)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is an ortholog of the Drosophila fat gene, which encodes a tumor suppressor essential for controlling cell proliferation during Drosophila development. The gene product is a member of the cadherin superfamily, a group of integral membrane proteins characterized by the presence of cadherin-type repeats. In addition to containing 34 tandem cadherin-type repeats, the gene product has five epidermal growth factor (EGF)-like repeats and one laminin A-G domain. This gene is expressed at high levels in a number of fetal epithelia. Its product probably functions as an adhesion molecule and/or signaling receptor, and is likely to be important in developmental processes and cell communication. Transcript variants derived from alternative splicing and/or alternative promoter usage exist, but they have not been fully described. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for a targeted null mutation exhibit holoprosencephaly, anophthalmia, kidney defects and perinatal lethality. Mice homozygous for a hypomorphic allele exhibit altered shoulder girdle and facial musculature, retinal defects, abnormal inner earpatterning and kidney defects. [provided by MGI curators]

Allele List at MGI

All alleles(56) : Targeted, other(1) Gene trapped(55)

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930568A12Rik	A	G	1: 34,524,661 (GRCm39)		noncoding transcript	Het
A2ml1	T	C	6: 128,518,024 (GRCm39)	T1421A	probably benign	Het
Actr8	T	A	14: 29,708,242 (GRCm39)	Y150*	probably null	Het
Adamts1	A	G	16: 85,595,432 (GRCm39)	C249R	probably damaging	Het
Adgre1	T	A	17: 57,752,034 (GRCm39)	I594N	probably damaging	Het
Atf6	A	T	1: 170,669,344 (GRCm39)	L119H	probably damaging	Het
Atf6	G	A	1: 170,669,345 (GRCm39)	L119F	possibly damaging	Het
B3gat2	G	A	1: 23,854,400 (GRCm39)	W33*	probably null	Het
Bach2	A	G	4: 32,580,268 (GRCm39)	D831G	probably damaging	Het
Ccnk	A	T	12: 108,153,466 (GRCm39)	I76F	probably damaging	Het
Cdyl	A	C	13: 36,042,066 (GRCm39)	K368T	possibly damaging	Het
Chi3l1	A	G	1: 134,112,909 (GRCm39)	T114A	probably benign	Het
Cnppd1	A	G	1: 75,113,131 (GRCm39)	V379A	probably benign	Het
Col11a2	C	A	17: 34,283,159 (GRCm39)		probably benign	Het
Creb3l1	T	C	2: 91,854,399 (GRCm39)	S18G	probably benign	Het
Crybg3	A	C	16: 59,385,632 (GRCm39)	D197E	probably damaging	Het
Cryga	T	C	1: 65,142,527 (GRCm39)		probably benign	Het
Cthrc1	T	C	15: 38,950,080 (GRCm39)	C146R	probably damaging	Het
Cyp2c39	A	T	19: 39,525,270 (GRCm39)	D191V	probably damaging	Het
Dchs1	C	T	7: 105,421,242 (GRCm39)	A393T	probably damaging	Het
Dhx30	G	A	9: 109,913,645 (GRCm39)	T1126I	probably damaging	Het
Dock2	C	T	11: 34,206,562 (GRCm39)	G1345R	probably damaging	Het
Dsc1	T	C	18: 20,228,081 (GRCm39)	E425G	probably damaging	Het
Dynlt2b	A	G	16: 32,247,614 (GRCm39)	Y143C	probably damaging	Het
Exosc8	C	T	3: 54,642,463 (GRCm39)		probably benign	Het
Flnb	T	A	14: 7,931,135 (GRCm38)	L2119Q	probably damaging	Het
Fnbp4	T	A	2: 90,587,826 (GRCm39)	D401E	probably benign	Het
Glyctk	T	C	9: 106,032,906 (GRCm39)	E369G	possibly damaging	Het
Gm14149	C	A	2: 151,066,225 (GRCm39)		noncoding transcript	Het
Golga4	T	C	9: 118,387,174 (GRCm39)	L1432P	probably damaging	Het
Gtpbp4	A	T	13: 9,023,196 (GRCm39)	S623T	probably benign	Het
Insc	A	C	7: 114,390,383 (GRCm39)	S85R	probably damaging	Het
Lgr4	G	A	2: 109,821,496 (GRCm39)	R126H	probably damaging	Het
M1ap	T	A	6: 82,980,795 (GRCm39)	L227Q	probably damaging	Het
Marchf7	T	C	2: 60,067,187 (GRCm39)	I569T	probably damaging	Het
Mbd1	C	A	18: 74,409,768 (GRCm39)	C339*	probably null	Het
Moxd2	T	A	6: 40,857,341 (GRCm39)	Y473F	probably damaging	Het
Mrgpra6	T	C	7: 46,839,099 (GRCm39)	H2R	probably benign	Het
Mtus1	T	G	8: 41,529,303 (GRCm39)	L742F	probably damaging	Het
Nek11	A	G	9: 105,270,160 (GRCm39)	Y21H	probably benign	Het
Notch4	G	T	17: 34,801,392 (GRCm39)	C1080F	probably damaging	Het
Nsd3	C	A	8: 26,156,107 (GRCm39)	P558Q	probably damaging	Het
Oas1e	A	T	5: 120,930,015 (GRCm39)	S168T	probably benign	Het
Ogfr	T	C	2: 180,234,285 (GRCm39)	S119P	probably damaging	Het
Or2y15	A	G	11: 49,350,563 (GRCm39)	D19G	probably damaging	Het
Or8g20	T	A	9: 39,395,767 (GRCm39)	M261L	probably benign	Het
Pde4dip	A	G	3: 97,631,504 (GRCm39)	I1135T	possibly damaging	Het
Prex1	G	A	2: 166,486,604 (GRCm39)		probably benign	Het
Ptprf	T	C	4: 118,068,486 (GRCm39)		probably benign	Het
Rapsn	T	C	2: 90,875,859 (GRCm39)	V359A	probably damaging	Het
Ric1	A	G	19: 29,577,245 (GRCm39)	S1050G	possibly damaging	Het
Rnft2	A	G	5: 118,366,868 (GRCm39)	I290T	possibly damaging	Het
Senp7	C	A	16: 55,975,722 (GRCm39)	A476E	possibly damaging	Het
Serpinh1	G	A	7: 98,995,571 (GRCm39)	S337L	probably damaging	Het
Slc5a12	C	A	2: 110,427,969 (GRCm39)	A8D	probably benign	Het
Smg5	T	A	3: 88,250,214 (GRCm39)	C109S	probably damaging	Het
Speer4b	T	C	5: 27,705,226 (GRCm39)	H49R	possibly damaging	Het
Tas2r109	T	C	6: 132,957,664 (GRCm39)	I89V	probably benign	Het
Tet1	A	G	10: 62,648,399 (GRCm39)		probably null	Het
Tmed6	G	T	8: 107,790,786 (GRCm39)	T87K	probably damaging	Het
Tpgs1	G	A	10: 79,505,545 (GRCm39)	G101D	probably damaging	Het
Trim13	T	G	14: 61,842,188 (GRCm39)	S68R	probably damaging	Het
Vwf	A	G	6: 125,620,053 (GRCm39)	N1577S		Het
Vwf	G	T	6: 125,656,228 (GRCm39)		probably benign	Het
Xpr1	T	C	1: 155,207,868 (GRCm39)		probably benign	Het
Ylpm1	C	T	12: 85,087,660 (GRCm39)	P1148L	probably damaging	Het
Zftraf1	A	T	15: 76,532,391 (GRCm39)	I239N	probably damaging	Het
Zftraf1	T	C	15: 76,540,615 (GRCm39)	Y101C	probably damaging	Het
Zscan29	G	T	2: 120,994,518 (GRCm39)	T489N	probably damaging	Het

Other mutations in Fat1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00088:Fat1	APN	8	45,477,639 (GRCm39)	missense	possibly damaging	0.93
IGL00157:Fat1	APN	8	45,404,707 (GRCm39)	missense	possibly damaging	0.96
IGL00481:Fat1	APN	8	45,503,977 (GRCm39)	missense	probably benign	0.18
IGL00983:Fat1	APN	8	45,486,427 (GRCm39)	missense	probably damaging	1.00
IGL01089:Fat1	APN	8	45,470,894 (GRCm39)	missense	probably damaging	1.00
IGL01135:Fat1	APN	8	45,477,877 (GRCm39)	missense	probably damaging	1.00
IGL01143:Fat1	APN	8	45,488,569 (GRCm39)	missense	possibly damaging	0.72
IGL01155:Fat1	APN	8	45,476,986 (GRCm39)	missense	probably damaging	1.00
IGL01376:Fat1	APN	8	45,479,878 (GRCm39)	missense	probably benign	0.00
IGL01411:Fat1	APN	8	45,479,837 (GRCm39)	missense	probably damaging	1.00
IGL01443:Fat1	APN	8	45,493,613 (GRCm39)	missense	probably damaging	1.00
IGL01453:Fat1	APN	8	45,504,307 (GRCm39)	missense	probably damaging	1.00
IGL01606:Fat1	APN	8	45,476,086 (GRCm39)	missense	probably benign	0.26
IGL01622:Fat1	APN	8	45,482,592 (GRCm39)	missense	possibly damaging	0.64
IGL01623:Fat1	APN	8	45,482,592 (GRCm39)	missense	possibly damaging	0.64
IGL01672:Fat1	APN	8	45,493,737 (GRCm39)	missense	probably benign	0.05
IGL01735:Fat1	APN	8	45,489,276 (GRCm39)	missense	probably benign	0.07
IGL01793:Fat1	APN	8	45,442,149 (GRCm39)	missense	probably benign
IGL01820:Fat1	APN	8	45,463,539 (GRCm39)	missense	probably damaging	1.00
IGL01969:Fat1	APN	8	45,405,636 (GRCm39)	missense	probably damaging	0.98
IGL02012:Fat1	APN	8	45,480,577 (GRCm39)	missense	possibly damaging	0.95
IGL02227:Fat1	APN	8	45,476,696 (GRCm39)	missense	probably damaging	1.00
IGL02256:Fat1	APN	8	45,403,369 (GRCm39)	missense	probably damaging	1.00
IGL02273:Fat1	APN	8	45,403,368 (GRCm39)	missense	probably damaging	1.00
IGL02317:Fat1	APN	8	45,478,855 (GRCm39)	missense	probably benign	0.33
IGL02324:Fat1	APN	8	45,493,593 (GRCm39)	missense	probably damaging	1.00
IGL02336:Fat1	APN	8	45,404,620 (GRCm39)	missense	probably benign	0.16
IGL02442:Fat1	APN	8	45,403,360 (GRCm39)	missense	probably benign	0.02
IGL02486:Fat1	APN	8	45,478,109 (GRCm39)	missense	probably benign	0.16
IGL02551:Fat1	APN	8	45,504,435 (GRCm39)	missense	probably damaging	1.00
IGL02617:Fat1	APN	8	45,488,628 (GRCm39)	missense	probably benign	0.31
IGL02698:Fat1	APN	8	45,476,201 (GRCm39)	missense	probably benign
IGL02885:Fat1	APN	8	45,442,204 (GRCm39)	missense	probably benign	0.01
IGL02904:Fat1	APN	8	45,493,719 (GRCm39)	missense	probably damaging	1.00
IGL02953:Fat1	APN	8	45,477,351 (GRCm39)	missense	probably damaging	1.00
IGL03108:Fat1	APN	8	45,476,651 (GRCm39)	missense	probably damaging	1.00
IGL03153:Fat1	APN	8	45,483,160 (GRCm39)	missense	possibly damaging	0.83
IGL03183:Fat1	APN	8	45,403,623 (GRCm39)	missense	probably damaging	0.99
IGL03327:Fat1	APN	8	45,403,505 (GRCm39)	missense	probably damaging	1.00
IGL03405:Fat1	APN	8	45,478,278 (GRCm39)	missense	probably damaging	1.00
Laggardly	UTSW	8	45,497,501 (GRCm39)	missense	probably damaging	1.00
R2257_fat1_465	UTSW	8	45,403,408 (GRCm39)	missense	probably damaging	1.00
Shrinkage	UTSW	8	45,471,074 (GRCm39)	missense	probably damaging	1.00
F5493:Fat1	UTSW	8	45,478,517 (GRCm39)	missense	probably damaging	0.99
G1citation:Fat1	UTSW	8	45,479,441 (GRCm39)	missense	probably damaging	1.00
I2289:Fat1	UTSW	8	45,478,033 (GRCm39)	missense	probably benign	0.01
IGL02837:Fat1	UTSW	8	45,470,471 (GRCm39)	missense	probably benign	0.00
PIT4283001:Fat1	UTSW	8	45,490,244 (GRCm39)	missense	probably damaging	1.00
PIT4283001:Fat1	UTSW	8	45,482,577 (GRCm39)	missense	probably damaging	1.00
PIT4576001:Fat1	UTSW	8	45,477,682 (GRCm39)	missense	probably damaging	1.00
R0040:Fat1	UTSW	8	45,479,441 (GRCm39)	missense	probably damaging	1.00
R0040:Fat1	UTSW	8	45,479,441 (GRCm39)	missense	probably damaging	1.00
R0078:Fat1	UTSW	8	45,406,336 (GRCm39)	missense	probably damaging	1.00
R0197:Fat1	UTSW	8	45,479,590 (GRCm39)	missense	probably benign	0.00
R0328:Fat1	UTSW	8	45,476,827 (GRCm39)	missense	probably benign	0.35
R0367:Fat1	UTSW	8	45,477,350 (GRCm39)	missense	probably damaging	1.00
R0371:Fat1	UTSW	8	45,404,929 (GRCm39)	missense	probably damaging	1.00
R0380:Fat1	UTSW	8	45,463,160 (GRCm39)	missense	probably damaging	0.97
R0389:Fat1	UTSW	8	45,403,385 (GRCm39)	missense	probably benign	0.00
R0433:Fat1	UTSW	8	45,477,686 (GRCm39)	missense	possibly damaging	0.51
R0456:Fat1	UTSW	8	45,482,571 (GRCm39)	missense	probably damaging	1.00
R0494:Fat1	UTSW	8	45,403,579 (GRCm39)	missense	probably damaging	1.00
R0506:Fat1	UTSW	8	45,475,988 (GRCm39)	missense	probably damaging	0.99
R0512:Fat1	UTSW	8	45,404,369 (GRCm39)	nonsense	probably null
R0624:Fat1	UTSW	8	45,504,205 (GRCm39)	missense	possibly damaging	0.46
R0701:Fat1	UTSW	8	45,479,590 (GRCm39)	missense	probably benign	0.00
R0723:Fat1	UTSW	8	45,479,786 (GRCm39)	missense	probably damaging	1.00
R0787:Fat1	UTSW	8	45,493,592 (GRCm39)	missense	probably damaging	1.00
R0788:Fat1	UTSW	8	45,477,020 (GRCm39)	missense	probably benign	0.27
R0862:Fat1	UTSW	8	45,471,074 (GRCm39)	missense	probably damaging	1.00
R0864:Fat1	UTSW	8	45,471,074 (GRCm39)	missense	probably damaging	1.00
R0907:Fat1	UTSW	8	45,479,635 (GRCm39)	missense	probably benign	0.08
R0962:Fat1	UTSW	8	45,486,363 (GRCm39)	splice site	probably benign
R1051:Fat1	UTSW	8	45,497,543 (GRCm39)	missense	probably damaging	1.00
R1156:Fat1	UTSW	8	45,492,927 (GRCm39)	missense	possibly damaging	0.94
R1237:Fat1	UTSW	8	45,497,316 (GRCm39)	missense	probably damaging	1.00
R1468:Fat1	UTSW	8	45,463,582 (GRCm39)	missense	probably damaging	1.00
R1468:Fat1	UTSW	8	45,463,582 (GRCm39)	missense	probably damaging	1.00
R1478:Fat1	UTSW	8	45,478,659 (GRCm39)	missense	probably damaging	0.99
R1482:Fat1	UTSW	8	45,406,281 (GRCm39)	missense	probably benign	0.04
R1496:Fat1	UTSW	8	45,486,427 (GRCm39)	missense	probably damaging	1.00
R1498:Fat1	UTSW	8	45,478,521 (GRCm39)	nonsense	probably null
R1508:Fat1	UTSW	8	45,479,899 (GRCm39)	missense	probably benign	0.01
R1577:Fat1	UTSW	8	45,476,420 (GRCm39)	missense	probably benign	0.30
R1646:Fat1	UTSW	8	45,471,079 (GRCm39)	missense	probably damaging	1.00
R1652:Fat1	UTSW	8	45,478,215 (GRCm39)	nonsense	probably null
R1656:Fat1	UTSW	8	45,478,567 (GRCm39)	nonsense	probably null
R1662:Fat1	UTSW	8	45,406,201 (GRCm39)	missense	probably benign	0.20
R1672:Fat1	UTSW	8	45,489,872 (GRCm39)	missense	probably damaging	1.00
R1704:Fat1	UTSW	8	45,478,613 (GRCm39)	missense	probably damaging	1.00
R1708:Fat1	UTSW	8	45,477,829 (GRCm39)	missense	probably damaging	1.00
R1710:Fat1	UTSW	8	45,463,519 (GRCm39)	missense	probably benign	0.00
R1812:Fat1	UTSW	8	45,489,840 (GRCm39)	missense	probably damaging	1.00
R1872:Fat1	UTSW	8	45,491,386 (GRCm39)	missense	probably damaging	1.00
R1872:Fat1	UTSW	8	45,406,341 (GRCm39)	missense	probably benign	0.01
R1883:Fat1	UTSW	8	45,504,184 (GRCm39)	missense	probably benign	0.17
R1893:Fat1	UTSW	8	45,476,893 (GRCm39)	missense	probably damaging	1.00
R1930:Fat1	UTSW	8	45,497,265 (GRCm39)	missense	possibly damaging	0.91
R1931:Fat1	UTSW	8	45,497,265 (GRCm39)	missense	possibly damaging	0.91
R1952:Fat1	UTSW	8	45,486,963 (GRCm39)	missense	probably benign	0.00
R1957:Fat1	UTSW	8	45,493,719 (GRCm39)	missense	probably damaging	1.00
R1999:Fat1	UTSW	8	45,405,430 (GRCm39)	missense	probably damaging	0.96
R2019:Fat1	UTSW	8	45,476,783 (GRCm39)	missense	probably damaging	1.00
R2062:Fat1	UTSW	8	45,479,741 (GRCm39)	missense	probably damaging	1.00
R2062:Fat1	UTSW	8	45,477,369 (GRCm39)	missense	probably damaging	1.00
R2117:Fat1	UTSW	8	45,490,500 (GRCm39)	missense	probably benign	0.33
R2196:Fat1	UTSW	8	45,477,683 (GRCm39)	missense	probably damaging	1.00
R2204:Fat1	UTSW	8	45,476,737 (GRCm39)	missense	probably damaging	1.00
R2256:Fat1	UTSW	8	45,403,408 (GRCm39)	missense	probably damaging	1.00
R2257:Fat1	UTSW	8	45,403,408 (GRCm39)	missense	probably damaging	1.00
R2409:Fat1	UTSW	8	45,493,567 (GRCm39)	splice site	probably benign
R2416:Fat1	UTSW	8	45,479,420 (GRCm39)	missense	probably damaging	1.00
R3021:Fat1	UTSW	8	45,497,048 (GRCm39)	missense	probably damaging	1.00
R3108:Fat1	UTSW	8	45,498,210 (GRCm39)	splice site	probably null
R3109:Fat1	UTSW	8	45,498,210 (GRCm39)	splice site	probably null
R3196:Fat1	UTSW	8	45,404,905 (GRCm39)	missense	probably benign	0.00
R3683:Fat1	UTSW	8	45,470,975 (GRCm39)	missense	probably benign
R3732:Fat1	UTSW	8	45,406,306 (GRCm39)	missense	possibly damaging	0.85
R3732:Fat1	UTSW	8	45,406,306 (GRCm39)	missense	possibly damaging	0.85
R3733:Fat1	UTSW	8	45,406,306 (GRCm39)	missense	possibly damaging	0.85
R3753:Fat1	UTSW	8	45,478,516 (GRCm39)	missense	probably damaging	0.97
R3905:Fat1	UTSW	8	45,476,072 (GRCm39)	missense	probably benign	0.00
R3907:Fat1	UTSW	8	45,476,072 (GRCm39)	missense	probably benign	0.00
R3908:Fat1	UTSW	8	45,476,072 (GRCm39)	missense	probably benign	0.00
R4060:Fat1	UTSW	8	45,478,518 (GRCm39)	missense	probably benign	0.09
R4061:Fat1	UTSW	8	45,478,518 (GRCm39)	missense	probably benign	0.09
R4062:Fat1	UTSW	8	45,478,518 (GRCm39)	missense	probably benign	0.09
R4063:Fat1	UTSW	8	45,478,518 (GRCm39)	missense	probably benign	0.09
R4078:Fat1	UTSW	8	45,442,159 (GRCm39)	missense	probably damaging	0.99
R4105:Fat1	UTSW	8	45,489,888 (GRCm39)	missense	probably damaging	1.00
R4118:Fat1	UTSW	8	45,503,981 (GRCm39)	missense	probably damaging	1.00
R4118:Fat1	UTSW	8	45,463,474 (GRCm39)	missense	probably damaging	1.00
R4161:Fat1	UTSW	8	45,489,824 (GRCm39)	missense	probably benign	0.00
R4364:Fat1	UTSW	8	45,405,999 (GRCm39)	missense	probably benign	0.01
R4394:Fat1	UTSW	8	45,405,383 (GRCm39)	missense	probably damaging	0.98
R4395:Fat1	UTSW	8	45,405,383 (GRCm39)	missense	probably damaging	0.98
R4396:Fat1	UTSW	8	45,405,383 (GRCm39)	missense	probably damaging	0.98
R4412:Fat1	UTSW	8	45,476,636 (GRCm39)	missense	probably damaging	0.99
R4542:Fat1	UTSW	8	45,494,931 (GRCm39)	missense	probably damaging	1.00
R4591:Fat1	UTSW	8	45,479,279 (GRCm39)	missense	probably benign
R4606:Fat1	UTSW	8	45,403,720 (GRCm39)	missense	possibly damaging	0.47
R4612:Fat1	UTSW	8	45,478,184 (GRCm39)	missense	probably damaging	1.00
R4730:Fat1	UTSW	8	45,486,514 (GRCm39)	missense	probably damaging	1.00
R4778:Fat1	UTSW	8	45,491,363 (GRCm39)	missense	probably benign	0.04
R4824:Fat1	UTSW	8	45,442,151 (GRCm39)	missense	probably damaging	1.00
R4829:Fat1	UTSW	8	45,489,199 (GRCm39)	missense	probably damaging	1.00
R4832:Fat1	UTSW	8	45,466,102 (GRCm39)	missense	possibly damaging	0.95
R4849:Fat1	UTSW	8	45,466,007 (GRCm39)	missense	probably benign	0.15
R4896:Fat1	UTSW	8	45,404,317 (GRCm39)	missense	possibly damaging	0.68
R4927:Fat1	UTSW	8	45,476,000 (GRCm39)	missense	probably damaging	0.96
R4941:Fat1	UTSW	8	45,489,312 (GRCm39)	missense	probably benign	0.00
R5011:Fat1	UTSW	8	45,484,300 (GRCm39)	critical splice acceptor site	probably null
R5040:Fat1	UTSW	8	45,476,417 (GRCm39)	missense	probably damaging	1.00
R5112:Fat1	UTSW	8	45,477,319 (GRCm39)	missense	probably damaging	1.00
R5151:Fat1	UTSW	8	45,404,851 (GRCm39)	missense	possibly damaging	0.74
R5161:Fat1	UTSW	8	45,405,549 (GRCm39)	missense	probably benign	0.00
R5162:Fat1	UTSW	8	45,478,846 (GRCm39)	missense	probably benign	0.02
R5353:Fat1	UTSW	8	45,489,168 (GRCm39)	missense	probably benign	0.13
R5425:Fat1	UTSW	8	45,478,922 (GRCm39)	missense	possibly damaging	0.64
R5458:Fat1	UTSW	8	45,466,090 (GRCm39)	missense	probably damaging	1.00
R5479:Fat1	UTSW	8	45,489,912 (GRCm39)	missense	possibly damaging	0.88
R5543:Fat1	UTSW	8	45,476,516 (GRCm39)	missense	probably damaging	0.99
R5569:Fat1	UTSW	8	45,492,873 (GRCm39)	missense	probably damaging	0.98
R5610:Fat1	UTSW	8	45,406,109 (GRCm39)	nonsense	probably null
R5734:Fat1	UTSW	8	45,504,246 (GRCm39)	missense	probably damaging	0.99
R5832:Fat1	UTSW	8	45,470,460 (GRCm39)	missense	possibly damaging	0.65
R5886:Fat1	UTSW	8	45,486,432 (GRCm39)	missense	probably damaging	1.00
R5886:Fat1	UTSW	8	45,480,718 (GRCm39)	critical splice donor site	probably null
R5919:Fat1	UTSW	8	45,479,910 (GRCm39)	critical splice donor site	probably null
R5930:Fat1	UTSW	8	45,497,073 (GRCm39)	missense	probably benign	0.10
R5960:Fat1	UTSW	8	45,486,405 (GRCm39)	missense	probably damaging	1.00
R5988:Fat1	UTSW	8	45,482,493 (GRCm39)	missense	probably benign	0.00
R6166:Fat1	UTSW	8	45,405,522 (GRCm39)	missense	probably damaging	1.00
R6184:Fat1	UTSW	8	45,406,429 (GRCm39)	missense	probably benign	0.00
R6208:Fat1	UTSW	8	45,480,650 (GRCm39)	missense	probably damaging	0.99
R6351:Fat1	UTSW	8	45,486,532 (GRCm39)	missense	probably damaging	1.00
R6391:Fat1	UTSW	8	45,405,379 (GRCm39)	missense	possibly damaging	0.69
R6701:Fat1	UTSW	8	45,403,718 (GRCm39)	missense	probably damaging	1.00
R6702:Fat1	UTSW	8	45,406,083 (GRCm39)	missense	probably benign	0.28
R6703:Fat1	UTSW	8	45,406,083 (GRCm39)	missense	probably benign	0.28
R6704:Fat1	UTSW	8	45,477,410 (GRCm39)	missense	probably damaging	1.00
R6822:Fat1	UTSW	8	45,479,441 (GRCm39)	missense	probably damaging	1.00
R6852:Fat1	UTSW	8	45,488,635 (GRCm39)	missense	possibly damaging	0.46
R6863:Fat1	UTSW	8	45,497,501 (GRCm39)	missense	probably damaging	1.00
R6885:Fat1	UTSW	8	45,405,489 (GRCm39)	missense	possibly damaging	0.94
R6912:Fat1	UTSW	8	45,504,060 (GRCm39)	missense	probably benign	0.00
R6927:Fat1	UTSW	8	45,477,532 (GRCm39)	missense	probably benign	0.41
R6964:Fat1	UTSW	8	45,496,982 (GRCm39)	missense	probably damaging	1.00
R7010:Fat1	UTSW	8	45,406,386 (GRCm39)	nonsense	probably null
R7062:Fat1	UTSW	8	45,403,253 (GRCm39)	start codon destroyed	probably null	0.99
R7063:Fat1	UTSW	8	45,493,812 (GRCm39)	missense	probably benign	0.09
R7071:Fat1	UTSW	8	45,442,145 (GRCm39)	missense	possibly damaging	0.67
R7117:Fat1	UTSW	8	45,484,505 (GRCm39)	missense	probably damaging	0.98
R7146:Fat1	UTSW	8	45,403,962 (GRCm39)	missense	probably benign
R7210:Fat1	UTSW	8	45,476,540 (GRCm39)	missense	probably damaging	1.00
R7227:Fat1	UTSW	8	45,463,646 (GRCm39)	missense	probably benign	0.08
R7270:Fat1	UTSW	8	45,490,475 (GRCm39)	missense	probably damaging	1.00
R7373:Fat1	UTSW	8	45,479,702 (GRCm39)	missense	probably damaging	1.00
R7390:Fat1	UTSW	8	45,405,511 (GRCm39)	missense	possibly damaging	0.81
R7465:Fat1	UTSW	8	45,497,189 (GRCm39)	missense	probably benign	0.35
R7476:Fat1	UTSW	8	45,484,311 (GRCm39)	missense	probably benign	0.01
R7483:Fat1	UTSW	8	45,476,197 (GRCm39)	missense	probably benign	0.13
R7484:Fat1	UTSW	8	45,489,221 (GRCm39)	missense	probably damaging	1.00
R7526:Fat1	UTSW	8	45,476,464 (GRCm39)	missense	probably damaging	1.00
R7549:Fat1	UTSW	8	45,442,031 (GRCm39)	missense	probably benign	0.01
R7554:Fat1	UTSW	8	45,490,202 (GRCm39)	missense	possibly damaging	0.88
R7620:Fat1	UTSW	8	45,462,887 (GRCm39)	missense	possibly damaging	0.95
R7652:Fat1	UTSW	8	45,406,336 (GRCm39)	missense	probably damaging	1.00
R7694:Fat1	UTSW	8	45,441,967 (GRCm39)	critical splice acceptor site	probably null
R7746:Fat1	UTSW	8	45,404,670 (GRCm39)	missense	probably damaging	0.96
R7762:Fat1	UTSW	8	45,490,374 (GRCm39)	missense	probably damaging	0.99
R7762:Fat1	UTSW	8	45,476,359 (GRCm39)	missense	probably damaging	1.00
R7782:Fat1	UTSW	8	45,403,948 (GRCm39)	missense	probably damaging	1.00
R7801:Fat1	UTSW	8	45,495,260 (GRCm39)	missense	probably damaging	1.00
R7807:Fat1	UTSW	8	45,495,010 (GRCm39)	missense	probably damaging	1.00
R7821:Fat1	UTSW	8	45,403,261 (GRCm39)	missense	probably benign
R7869:Fat1	UTSW	8	45,504,259 (GRCm39)	missense	probably benign	0.02
R8034:Fat1	UTSW	8	45,404,728 (GRCm39)	missense	probably benign	0.28
R8094:Fat1	UTSW	8	45,405,739 (GRCm39)	missense	probably damaging	0.98
R8111:Fat1	UTSW	8	45,479,095 (GRCm39)	missense	possibly damaging	0.94
R8220:Fat1	UTSW	8	45,492,993 (GRCm39)	missense	probably null
R8221:Fat1	UTSW	8	45,406,390 (GRCm39)	missense
R8233:Fat1	UTSW	8	45,405,055 (GRCm39)	missense
R8250:Fat1	UTSW	8	45,406,336 (GRCm39)	missense	probably damaging	1.00
R8279:Fat1	UTSW	8	45,483,384 (GRCm39)	critical splice donor site	probably null
R8726:Fat1	UTSW	8	45,477,206 (GRCm39)	missense	probably benign	0.23
R8875:Fat1	UTSW	8	45,493,600 (GRCm39)	missense	probably damaging	1.00
R8937:Fat1	UTSW	8	45,483,350 (GRCm39)	missense	probably damaging	1.00
R8950:Fat1	UTSW	8	45,476,158 (GRCm39)	missense	probably damaging	1.00
R8971:Fat1	UTSW	8	45,495,331 (GRCm39)	missense	probably damaging	1.00
R8976:Fat1	UTSW	8	45,484,332 (GRCm39)	missense	probably benign	0.02
R9000:Fat1	UTSW	8	45,497,587 (GRCm39)	nonsense	probably null
R9032:Fat1	UTSW	8	45,492,894 (GRCm39)	missense	probably benign	0.01
R9076:Fat1	UTSW	8	45,492,938 (GRCm39)	missense	probably damaging	1.00
R9083:Fat1	UTSW	8	45,491,336 (GRCm39)	missense	probably benign	0.00
R9083:Fat1	UTSW	8	45,466,127 (GRCm39)	missense	possibly damaging	0.76
R9103:Fat1	UTSW	8	45,404,850 (GRCm39)	missense	probably benign	0.38
R9124:Fat1	UTSW	8	45,478,064 (GRCm39)	missense	possibly damaging	0.48
R9124:Fat1	UTSW	8	45,403,363 (GRCm39)	missense	probably benign
R9128:Fat1	UTSW	8	45,462,878 (GRCm39)	missense	probably benign	0.14
R9148:Fat1	UTSW	8	45,405,682 (GRCm39)	missense	possibly damaging	0.81
R9162:Fat1	UTSW	8	45,404,352 (GRCm39)	missense	probably damaging	1.00
R9209:Fat1	UTSW	8	45,404,791 (GRCm39)	missense	possibly damaging	0.80
R9276:Fat1	UTSW	8	45,488,514 (GRCm39)	missense	probably damaging	0.99
R9303:Fat1	UTSW	8	45,463,498 (GRCm39)	missense	probably damaging	1.00
R9319:Fat1	UTSW	8	45,406,060 (GRCm39)	missense	probably damaging	1.00
R9392:Fat1	UTSW	8	45,476,228 (GRCm39)	missense	probably damaging	1.00
R9616:Fat1	UTSW	8	45,406,075 (GRCm39)	missense	probably damaging	0.99
R9712:Fat1	UTSW	8	45,470,417 (GRCm39)	missense	probably benign	0.05
R9756:Fat1	UTSW	8	45,496,974 (GRCm39)	missense	probably damaging	0.96
RF001:Fat1	UTSW	8	45,442,003 (GRCm39)	missense	probably benign	0.00
X0064:Fat1	UTSW	8	45,478,771 (GRCm39)	missense	possibly damaging	0.58
Z1088:Fat1	UTSW	8	45,476,844 (GRCm39)	missense	possibly damaging	0.88
Z1176:Fat1	UTSW	8	45,489,875 (GRCm39)	missense	probably damaging	1.00
Z1176:Fat1	UTSW	8	45,476,633 (GRCm39)	missense	possibly damaging	0.65
Z1176:Fat1	UTSW	8	45,403,635 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- ACATTGAAAGTGACTTTCCACCC -3'
(R):5'- TCGCTCATCATGACCTCAGAC -3'

Sequencing Primer
(F):5'- GTGACTTTCCACCCCCACCAG -3'
(R):5'- ATCATGACCTCAGACTCCACTTC -3'

Posted On

2017-02-10