Incidental Mutation 'R0555:Jmjd1c'
ID |
45495 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Jmjd1c
|
Ensembl Gene |
ENSMUSG00000037876 |
Gene Name |
jumonji domain containing 1C |
Synonyms |
D630035I23Rik, TRIP8, 5430433L24Rik |
MMRRC Submission |
038747-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.655)
|
Stock # |
R0555 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
10 |
Chromosomal Location |
66932189-67092105 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 67061568 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Alanine
at position 1307
(V1307A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000134551
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051446]
[ENSMUST00000173689]
[ENSMUST00000174317]
[ENSMUST00000174408]
|
AlphaFold |
Q69ZK6 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000051446
AA Change: V1307A
PolyPhen 2
Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
|
SMART Domains |
Protein: ENSMUSP00000056227 Gene: ENSMUSG00000037876 AA Change: V1307A
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2236 |
N/A |
BLAST |
JmjC
|
2264 |
2488 |
3.29e-53 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000173689
AA Change: V1126A
PolyPhen 2
Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
|
SMART Domains |
Protein: ENSMUSP00000133700 Gene: ENSMUSG00000037876 AA Change: V1126A
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
1 |
2056 |
N/A |
BLAST |
JmjC
|
2084 |
2308 |
3.29e-53 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000174317
|
SMART Domains |
Protein: ENSMUSP00000134246 Gene: ENSMUSG00000037876
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
1 |
744 |
N/A |
BLAST |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000174408
AA Change: V1307A
PolyPhen 2
Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)
|
SMART Domains |
Protein: ENSMUSP00000134551 Gene: ENSMUSG00000037876 AA Change: V1307A
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2237 |
N/A |
BLAST |
JmjC
|
2265 |
2489 |
3.29e-53 |
SMART |
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.6%
- 3x: 98.8%
- 10x: 96.9%
- 20x: 93.8%
|
Validation Efficiency |
100% (98/98) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene interacts with thyroid hormone receptors and contains a jumonji domain. It is a candidate histone demethylase and is thought to be a coactivator for key transcription factors. It plays a role in the DNA-damage response pathway by demethylating the mediator of DNA damage checkpoint 1 (MDC1) protein, and is required for the survival of acute myeloid leukemia. Mutations in this gene are associated with Rett syndrome and intellectual disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015] PHENOTYPE: Mice homozygous for a null allele exhibit an age-dependent male infertility phenotype, characterized by early loss of undifferentiated spermatogonia, and a progressive reduction in testis size/weight and male germ cells, partly due to increased male germ cell apoptosis. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 96 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam10 |
T |
A |
9: 70,661,516 (GRCm39) |
I363N |
probably damaging |
Het |
Ahcyl2 |
T |
C |
6: 29,890,670 (GRCm39) |
|
probably benign |
Het |
Asap1 |
A |
G |
15: 63,966,213 (GRCm39) |
L941P |
probably damaging |
Het |
Aurka |
G |
A |
2: 172,209,067 (GRCm39) |
R23C |
probably benign |
Het |
Cacna1c |
C |
T |
6: 118,589,586 (GRCm39) |
R1446H |
probably damaging |
Het |
Casp8ap2 |
T |
A |
4: 32,640,381 (GRCm39) |
H478Q |
probably damaging |
Het |
Clcn4 |
C |
T |
7: 7,293,503 (GRCm39) |
A418T |
possibly damaging |
Het |
Cplx3 |
T |
C |
9: 57,521,384 (GRCm39) |
T193A |
probably benign |
Het |
Cpxm2 |
A |
T |
7: 131,645,772 (GRCm39) |
Y715* |
probably null |
Het |
Csmd1 |
T |
C |
8: 16,235,287 (GRCm39) |
M1179V |
probably benign |
Het |
Ddx21 |
A |
T |
10: 62,423,307 (GRCm39) |
F632I |
probably damaging |
Het |
Dnai1 |
C |
A |
4: 41,625,335 (GRCm39) |
T433K |
possibly damaging |
Het |
Dpyd |
G |
A |
3: 119,225,191 (GRCm39) |
G988D |
probably damaging |
Het |
Dync1i2 |
AAAAGAAGAGGAAAGAAGAGGAAAG |
AAAAGAAGAGGAAAG |
2: 71,044,862 (GRCm39) |
|
probably null |
Het |
Dync1li2 |
A |
T |
8: 105,147,297 (GRCm39) |
S466T |
probably benign |
Het |
Ears2 |
T |
C |
7: 121,647,667 (GRCm39) |
T206A |
probably benign |
Het |
Elmod1 |
A |
T |
9: 53,838,876 (GRCm39) |
|
probably benign |
Het |
Eps8l3 |
C |
A |
3: 107,799,661 (GRCm39) |
D590E |
probably benign |
Het |
Etfdh |
A |
T |
3: 79,513,112 (GRCm39) |
H370Q |
probably benign |
Het |
Fam83g |
C |
A |
11: 61,598,489 (GRCm39) |
A792E |
probably benign |
Het |
Ffar3 |
G |
T |
7: 30,554,962 (GRCm39) |
Y119* |
probably null |
Het |
Fosb |
G |
T |
7: 19,041,138 (GRCm39) |
S118R |
possibly damaging |
Het |
Foxn4 |
G |
A |
5: 114,401,175 (GRCm39) |
L3F |
probably damaging |
Het |
Foxo4 |
A |
G |
X: 100,298,784 (GRCm39) |
K65E |
probably damaging |
Het |
Frem2 |
A |
G |
3: 53,424,281 (GRCm39) |
L3052P |
probably damaging |
Het |
Fubp3 |
G |
A |
2: 31,498,149 (GRCm39) |
R101H |
probably damaging |
Het |
Gba2 |
C |
A |
4: 43,569,927 (GRCm39) |
G429C |
probably damaging |
Het |
Gimap1 |
T |
C |
6: 48,718,363 (GRCm39) |
|
probably benign |
Het |
Gnas |
A |
G |
2: 174,140,304 (GRCm39) |
T158A |
possibly damaging |
Het |
Gpc5 |
T |
C |
14: 115,789,740 (GRCm39) |
V538A |
probably damaging |
Het |
Greb1l |
T |
C |
18: 10,458,781 (GRCm39) |
|
probably benign |
Het |
H2-M10.5 |
G |
A |
17: 37,085,620 (GRCm39) |
G260R |
probably damaging |
Het |
Hbs1l |
A |
C |
10: 21,225,222 (GRCm39) |
Q412H |
probably benign |
Het |
Hecw1 |
G |
T |
13: 14,411,526 (GRCm39) |
T1058N |
probably damaging |
Het |
Heph |
A |
T |
X: 95,601,690 (GRCm39) |
T1027S |
probably damaging |
Het |
Hoga1 |
A |
C |
19: 42,034,514 (GRCm39) |
E53A |
possibly damaging |
Het |
Insrr |
T |
G |
3: 87,721,744 (GRCm39) |
|
probably benign |
Het |
Ipo11 |
A |
T |
13: 107,028,969 (GRCm39) |
V328D |
probably damaging |
Het |
Jakmip1 |
T |
C |
5: 37,276,217 (GRCm39) |
V509A |
probably damaging |
Het |
Kmt2a |
T |
A |
9: 44,758,868 (GRCm39) |
S1027C |
probably damaging |
Het |
Kprp |
G |
C |
3: 92,731,664 (GRCm39) |
P462R |
unknown |
Het |
Lrit3 |
A |
T |
3: 129,584,945 (GRCm39) |
V271D |
probably damaging |
Het |
Map4 |
T |
A |
9: 109,808,171 (GRCm39) |
|
probably benign |
Het |
Mark4 |
A |
C |
7: 19,182,598 (GRCm39) |
|
probably benign |
Het |
Mfsd14b |
A |
G |
13: 65,226,259 (GRCm39) |
V142A |
probably benign |
Het |
Mis18bp1 |
A |
T |
12: 65,208,227 (GRCm39) |
I162N |
possibly damaging |
Het |
Mrpl43 |
A |
T |
19: 44,994,391 (GRCm39) |
|
probably benign |
Het |
Mrpl47 |
A |
G |
3: 32,790,842 (GRCm39) |
F16S |
probably benign |
Het |
Myh2 |
G |
T |
11: 67,069,793 (GRCm39) |
G380C |
probably damaging |
Het |
Myo15a |
T |
C |
11: 60,412,464 (GRCm39) |
Y3284H |
probably damaging |
Het |
Nectin2 |
A |
G |
7: 19,467,148 (GRCm39) |
|
probably benign |
Het |
Neu3 |
A |
G |
7: 99,463,390 (GRCm39) |
V111A |
probably damaging |
Het |
Nol4l |
T |
C |
2: 153,259,604 (GRCm39) |
|
probably null |
Het |
Nphp3 |
C |
A |
9: 103,900,633 (GRCm39) |
H510Q |
probably damaging |
Het |
Nprl3 |
T |
A |
11: 32,183,118 (GRCm39) |
|
probably null |
Het |
Or14c39 |
A |
G |
7: 86,344,516 (GRCm39) |
N284S |
probably damaging |
Het |
Or4c58 |
T |
C |
2: 89,674,787 (GRCm39) |
T177A |
probably benign |
Het |
Or52ab7 |
T |
C |
7: 102,978,170 (GRCm39) |
V159A |
probably benign |
Het |
Or6c2 |
T |
C |
10: 129,362,765 (GRCm39) |
I223T |
possibly damaging |
Het |
Pex1 |
A |
G |
5: 3,656,130 (GRCm39) |
E319G |
possibly damaging |
Het |
Pgap6 |
T |
C |
17: 26,336,088 (GRCm39) |
L130S |
probably benign |
Het |
Phtf1 |
C |
A |
3: 103,911,785 (GRCm39) |
T709K |
probably damaging |
Het |
Plek2 |
A |
T |
12: 78,938,946 (GRCm39) |
L271Q |
probably damaging |
Het |
Plekhg5 |
T |
A |
4: 152,191,926 (GRCm39) |
C421* |
probably null |
Het |
Polk |
A |
C |
13: 96,620,687 (GRCm39) |
C525W |
probably damaging |
Het |
Ppfibp2 |
T |
C |
7: 107,328,381 (GRCm39) |
S471P |
probably damaging |
Het |
Prickle2 |
A |
T |
6: 92,435,546 (GRCm39) |
F74L |
probably benign |
Het |
Prl7d1 |
A |
T |
13: 27,896,038 (GRCm39) |
V113D |
probably benign |
Het |
Prr14 |
C |
T |
7: 127,071,267 (GRCm39) |
|
probably benign |
Het |
Ptpro |
T |
A |
6: 137,420,592 (GRCm39) |
V1007D |
probably damaging |
Het |
Ret |
A |
G |
6: 118,155,571 (GRCm39) |
V375A |
probably damaging |
Het |
Rora |
T |
C |
9: 69,269,028 (GRCm39) |
F41S |
probably damaging |
Het |
Sall1 |
T |
C |
8: 89,758,386 (GRCm39) |
T573A |
probably benign |
Het |
Shb |
A |
G |
4: 45,458,321 (GRCm39) |
V281A |
possibly damaging |
Het |
Slc25a26 |
A |
T |
6: 94,569,391 (GRCm39) |
|
probably null |
Het |
Sltm |
T |
C |
9: 70,493,363 (GRCm39) |
F769L |
probably damaging |
Het |
Snx9 |
T |
A |
17: 5,968,688 (GRCm39) |
M328K |
probably damaging |
Het |
Stk25 |
G |
T |
1: 93,552,313 (GRCm39) |
Q356K |
probably benign |
Het |
Svep1 |
T |
A |
4: 58,128,858 (GRCm39) |
Y613F |
possibly damaging |
Het |
Syne4 |
G |
A |
7: 30,016,169 (GRCm39) |
A195T |
probably damaging |
Het |
Tmem217b |
A |
T |
17: 29,738,545 (GRCm39) |
F74I |
probably benign |
Het |
Trcg1 |
C |
T |
9: 57,149,616 (GRCm39) |
T396M |
probably damaging |
Het |
Trim30b |
A |
G |
7: 104,006,505 (GRCm39) |
V117A |
possibly damaging |
Het |
Trpc4 |
T |
C |
3: 54,209,511 (GRCm39) |
|
probably benign |
Het |
Ttll4 |
A |
G |
1: 74,727,439 (GRCm39) |
H827R |
probably damaging |
Het |
Tut7 |
A |
G |
13: 59,948,131 (GRCm39) |
V328A |
probably benign |
Het |
Urgcp |
T |
C |
11: 5,667,477 (GRCm39) |
E287G |
probably damaging |
Het |
Usp2 |
G |
T |
9: 44,004,081 (GRCm39) |
L319F |
probably damaging |
Het |
Vmn1r167 |
A |
T |
7: 23,204,512 (GRCm39) |
V168D |
probably damaging |
Het |
Vmn2r100 |
C |
A |
17: 19,742,382 (GRCm39) |
P252Q |
possibly damaging |
Het |
Vmn2r61 |
A |
T |
7: 41,915,442 (GRCm39) |
I130F |
probably benign |
Het |
Vmn2r63 |
A |
T |
7: 42,577,952 (GRCm39) |
Y195* |
probably null |
Het |
Vmn2r81 |
T |
C |
10: 79,129,283 (GRCm39) |
S725P |
probably damaging |
Het |
Wnt10b |
A |
G |
15: 98,670,818 (GRCm39) |
|
probably benign |
Het |
Zfp292 |
T |
C |
4: 34,807,194 (GRCm39) |
E1950G |
probably damaging |
Het |
Zfyve16 |
A |
G |
13: 92,653,028 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Jmjd1c |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01062:Jmjd1c
|
APN |
10 |
67,062,494 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01604:Jmjd1c
|
APN |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01753:Jmjd1c
|
APN |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02081:Jmjd1c
|
APN |
10 |
67,055,305 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02128:Jmjd1c
|
APN |
10 |
67,079,648 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02134:Jmjd1c
|
APN |
10 |
67,056,171 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL02215:Jmjd1c
|
APN |
10 |
67,056,101 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02408:Jmjd1c
|
APN |
10 |
67,062,161 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02502:Jmjd1c
|
APN |
10 |
67,061,640 (GRCm39) |
missense |
probably benign |
0.13 |
IGL02546:Jmjd1c
|
APN |
10 |
67,061,115 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02943:Jmjd1c
|
APN |
10 |
67,055,433 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03171:Jmjd1c
|
APN |
10 |
67,061,277 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL03261:Jmjd1c
|
APN |
10 |
67,067,849 (GRCm39) |
missense |
probably damaging |
0.99 |
Accordion
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
PIT4378001:Jmjd1c
|
UTSW |
10 |
67,065,692 (GRCm39) |
missense |
probably damaging |
1.00 |
R0126:Jmjd1c
|
UTSW |
10 |
67,055,105 (GRCm39) |
missense |
probably damaging |
0.98 |
R0133:Jmjd1c
|
UTSW |
10 |
67,076,587 (GRCm39) |
missense |
probably benign |
0.22 |
R0201:Jmjd1c
|
UTSW |
10 |
67,054,888 (GRCm39) |
missense |
unknown |
|
R0396:Jmjd1c
|
UTSW |
10 |
67,055,302 (GRCm39) |
missense |
possibly damaging |
0.82 |
R0401:Jmjd1c
|
UTSW |
10 |
67,056,161 (GRCm39) |
missense |
probably damaging |
1.00 |
R0452:Jmjd1c
|
UTSW |
10 |
67,091,261 (GRCm39) |
missense |
probably benign |
0.28 |
R0488:Jmjd1c
|
UTSW |
10 |
67,076,506 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Jmjd1c
|
UTSW |
10 |
67,061,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R0673:Jmjd1c
|
UTSW |
10 |
67,062,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R0718:Jmjd1c
|
UTSW |
10 |
67,054,725 (GRCm39) |
splice site |
probably null |
|
R0755:Jmjd1c
|
UTSW |
10 |
66,932,378 (GRCm39) |
intron |
probably benign |
|
R1142:Jmjd1c
|
UTSW |
10 |
67,061,124 (GRCm39) |
missense |
probably damaging |
1.00 |
R1196:Jmjd1c
|
UTSW |
10 |
67,075,015 (GRCm39) |
splice site |
probably benign |
|
R1413:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R1619:Jmjd1c
|
UTSW |
10 |
67,055,654 (GRCm39) |
missense |
probably benign |
0.25 |
R1676:Jmjd1c
|
UTSW |
10 |
67,060,588 (GRCm39) |
missense |
probably benign |
0.02 |
R1751:Jmjd1c
|
UTSW |
10 |
67,061,469 (GRCm39) |
missense |
probably benign |
|
R1950:Jmjd1c
|
UTSW |
10 |
67,075,701 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1968:Jmjd1c
|
UTSW |
10 |
67,061,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R2049:Jmjd1c
|
UTSW |
10 |
66,993,777 (GRCm39) |
nonsense |
probably null |
|
R2061:Jmjd1c
|
UTSW |
10 |
67,054,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R2202:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2203:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2256:Jmjd1c
|
UTSW |
10 |
67,061,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R2312:Jmjd1c
|
UTSW |
10 |
67,074,629 (GRCm39) |
missense |
probably damaging |
0.98 |
R2349:Jmjd1c
|
UTSW |
10 |
67,091,279 (GRCm39) |
missense |
probably benign |
|
R2392:Jmjd1c
|
UTSW |
10 |
67,065,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R3015:Jmjd1c
|
UTSW |
10 |
66,993,711 (GRCm39) |
missense |
probably damaging |
1.00 |
R3110:Jmjd1c
|
UTSW |
10 |
67,075,863 (GRCm39) |
splice site |
probably benign |
|
R4043:Jmjd1c
|
UTSW |
10 |
67,055,245 (GRCm39) |
missense |
possibly damaging |
0.55 |
R4097:Jmjd1c
|
UTSW |
10 |
67,054,787 (GRCm39) |
missense |
probably benign |
0.09 |
R4118:Jmjd1c
|
UTSW |
10 |
67,055,532 (GRCm39) |
missense |
probably damaging |
0.96 |
R4193:Jmjd1c
|
UTSW |
10 |
66,932,460 (GRCm39) |
intron |
probably benign |
|
R4352:Jmjd1c
|
UTSW |
10 |
67,080,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R4577:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R4630:Jmjd1c
|
UTSW |
10 |
66,993,753 (GRCm39) |
nonsense |
probably null |
|
R4717:Jmjd1c
|
UTSW |
10 |
66,993,830 (GRCm39) |
nonsense |
probably null |
|
R4741:Jmjd1c
|
UTSW |
10 |
67,060,718 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4774:Jmjd1c
|
UTSW |
10 |
67,060,571 (GRCm39) |
missense |
possibly damaging |
0.45 |
R4836:Jmjd1c
|
UTSW |
10 |
67,069,225 (GRCm39) |
missense |
probably benign |
0.21 |
R4914:Jmjd1c
|
UTSW |
10 |
67,054,750 (GRCm39) |
missense |
probably damaging |
1.00 |
R4939:Jmjd1c
|
UTSW |
10 |
67,081,916 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5211:Jmjd1c
|
UTSW |
10 |
67,067,795 (GRCm39) |
missense |
probably damaging |
1.00 |
R5215:Jmjd1c
|
UTSW |
10 |
67,076,480 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5514:Jmjd1c
|
UTSW |
10 |
67,053,928 (GRCm39) |
missense |
probably damaging |
1.00 |
R5530:Jmjd1c
|
UTSW |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
R5624:Jmjd1c
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
R5640:Jmjd1c
|
UTSW |
10 |
67,061,857 (GRCm39) |
missense |
probably benign |
0.10 |
R5654:Jmjd1c
|
UTSW |
10 |
67,065,785 (GRCm39) |
missense |
probably benign |
0.10 |
R5742:Jmjd1c
|
UTSW |
10 |
67,056,112 (GRCm39) |
missense |
probably benign |
0.02 |
R5764:Jmjd1c
|
UTSW |
10 |
67,062,291 (GRCm39) |
missense |
probably damaging |
1.00 |
R6118:Jmjd1c
|
UTSW |
10 |
67,075,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R6163:Jmjd1c
|
UTSW |
10 |
67,083,827 (GRCm39) |
missense |
possibly damaging |
0.46 |
R6256:Jmjd1c
|
UTSW |
10 |
67,056,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R6266:Jmjd1c
|
UTSW |
10 |
67,085,439 (GRCm39) |
missense |
probably damaging |
0.96 |
R6358:Jmjd1c
|
UTSW |
10 |
67,061,718 (GRCm39) |
missense |
probably benign |
|
R6430:Jmjd1c
|
UTSW |
10 |
67,059,939 (GRCm39) |
missense |
possibly damaging |
0.87 |
R6455:Jmjd1c
|
UTSW |
10 |
67,061,795 (GRCm39) |
missense |
probably benign |
0.10 |
R6887:Jmjd1c
|
UTSW |
10 |
67,025,599 (GRCm39) |
missense |
possibly damaging |
0.74 |
R6895:Jmjd1c
|
UTSW |
10 |
67,052,869 (GRCm39) |
missense |
probably benign |
0.00 |
R7041:Jmjd1c
|
UTSW |
10 |
67,056,388 (GRCm39) |
missense |
possibly damaging |
0.90 |
R7095:Jmjd1c
|
UTSW |
10 |
67,055,411 (GRCm39) |
missense |
probably benign |
0.39 |
R7113:Jmjd1c
|
UTSW |
10 |
66,993,780 (GRCm39) |
missense |
probably damaging |
0.98 |
R7225:Jmjd1c
|
UTSW |
10 |
67,061,844 (GRCm39) |
missense |
probably benign |
0.00 |
R7249:Jmjd1c
|
UTSW |
10 |
67,025,596 (GRCm39) |
missense |
probably benign |
0.01 |
R7361:Jmjd1c
|
UTSW |
10 |
67,054,143 (GRCm39) |
missense |
probably benign |
0.10 |
R7383:Jmjd1c
|
UTSW |
10 |
67,025,537 (GRCm39) |
missense |
probably benign |
0.14 |
R7460:Jmjd1c
|
UTSW |
10 |
67,052,815 (GRCm39) |
missense |
probably benign |
0.24 |
R7475:Jmjd1c
|
UTSW |
10 |
67,061,092 (GRCm39) |
missense |
probably benign |
0.22 |
R7502:Jmjd1c
|
UTSW |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
0.99 |
R7699:Jmjd1c
|
UTSW |
10 |
67,054,195 (GRCm39) |
missense |
probably benign |
0.10 |
R7745:Jmjd1c
|
UTSW |
10 |
67,052,824 (GRCm39) |
missense |
probably damaging |
0.96 |
R7897:Jmjd1c
|
UTSW |
10 |
67,075,644 (GRCm39) |
missense |
probably damaging |
0.96 |
R7908:Jmjd1c
|
UTSW |
10 |
67,061,621 (GRCm39) |
missense |
probably benign |
|
R7911:Jmjd1c
|
UTSW |
10 |
67,067,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R7967:Jmjd1c
|
UTSW |
10 |
67,085,461 (GRCm39) |
missense |
probably damaging |
1.00 |
R8058:Jmjd1c
|
UTSW |
10 |
67,090,274 (GRCm39) |
missense |
not run |
|
R8224:Jmjd1c
|
UTSW |
10 |
67,080,628 (GRCm39) |
missense |
noncoding transcript |
|
R8251:Jmjd1c
|
UTSW |
10 |
67,075,068 (GRCm39) |
missense |
noncoding transcript |
|
R8797:Jmjd1c
|
UTSW |
10 |
67,060,616 (GRCm39) |
missense |
probably benign |
|
R8833:Jmjd1c
|
UTSW |
10 |
67,054,162 (GRCm39) |
missense |
probably benign |
0.03 |
R9262:Jmjd1c
|
UTSW |
10 |
67,083,793 (GRCm39) |
missense |
probably benign |
0.39 |
R9354:Jmjd1c
|
UTSW |
10 |
67,059,875 (GRCm39) |
missense |
probably damaging |
0.99 |
R9373:Jmjd1c
|
UTSW |
10 |
66,932,495 (GRCm39) |
intron |
probably benign |
|
R9477:Jmjd1c
|
UTSW |
10 |
66,993,734 (GRCm39) |
nonsense |
probably null |
|
R9519:Jmjd1c
|
UTSW |
10 |
66,993,798 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9701:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
R9802:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
RF011:Jmjd1c
|
UTSW |
10 |
67,055,978 (GRCm39) |
missense |
possibly damaging |
0.47 |
Z1088:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1176:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1177:Jmjd1c
|
UTSW |
10 |
67,081,904 (GRCm39) |
missense |
probably damaging |
0.98 |
Z1177:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- GAAAGCAGCTACAGTAGCCTTTCCC -3'
(R):5'- CTGCACTACTCAAGCTGGAGACAC -3'
Sequencing Primer
(F):5'- CTGGTGGCAAAGTTCAAGAATCTC -3'
(R):5'- CACATCTGCTTTGGTAGTAGAGAC -3'
|
Posted On |
2013-06-11 |