Incidental Mutation 'R5945:Chd5'
ID |
460536 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Chd5
|
Ensembl Gene |
ENSMUSG00000005045 |
Gene Name |
chromodomain helicase DNA binding protein 5 |
Synonyms |
B230399N07Rik, 4930532L22Rik |
MMRRC Submission |
044137-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R5945 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
152423108-152474651 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to T
at 152464408 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamine to Histidine
at position 1522
(Q1522H)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000132600
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000005175]
[ENSMUST00000030775]
[ENSMUST00000164662]
|
AlphaFold |
A2A8L1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000005175
AA Change: Q1559H
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000005175 Gene: ENSMUSG00000005045 AA Change: Q1559H
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
2e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1729 |
1901 |
1.7e-99 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000030775
AA Change: Q1559H
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000030775 Gene: ENSMUSG00000005045 AA Change: Q1559H
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
150 |
203 |
9e-28 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1730 |
1901 |
2.8e-93 |
PFAM |
low complexity region
|
1922 |
1936 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124423
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000164662
AA Change: Q1522H
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000132600 Gene: ENSMUSG00000005045 AA Change: Q1522H
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
1.9e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1260 |
1324 |
2.78e-33 |
SMART |
DUF1086
|
1337 |
1496 |
5.11e-105 |
SMART |
low complexity region
|
1515 |
1530 |
N/A |
INTRINSIC |
low complexity region
|
1648 |
1664 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1692 |
1864 |
1.7e-99 |
PFAM |
low complexity region
|
1885 |
1899 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.6%
- 10x: 97.9%
- 20x: 93.6%
|
Validation Efficiency |
100% (101/101) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the chromodomain helicase DNA-binding protein family. Members of this family are characterized by a chromodomain, a helicase ATP-binding domain and an additional functional domain. This gene encodes a neuron-specific protein that may function in chromatin remodeling and gene transcription. This gene is a potential tumor suppressor gene that may play a role in the development of neuroblastoma. [provided by RefSeq, Feb 2012] PHENOTYPE: Mice homozygous for a knock-out allele exhibit male infertility with abnormal spermiogenesis and chromatin condensation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 83 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930488N24Rik |
T |
C |
17: 14,326,601 (GRCm39) |
|
noncoding transcript |
Het |
Abca13 |
C |
T |
11: 9,243,398 (GRCm39) |
H1754Y |
probably benign |
Het |
Abi1 |
T |
C |
2: 22,929,977 (GRCm39) |
E34G |
probably damaging |
Het |
Apobec3 |
C |
T |
15: 79,782,047 (GRCm39) |
T19I |
probably damaging |
Het |
Arel1 |
C |
A |
12: 84,973,121 (GRCm39) |
V559L |
probably benign |
Het |
Arhgef10 |
T |
C |
8: 15,030,028 (GRCm39) |
|
probably null |
Het |
Asb6 |
T |
C |
2: 30,718,215 (GRCm39) |
|
probably benign |
Het |
Asxl2 |
T |
C |
12: 3,550,439 (GRCm39) |
V727A |
possibly damaging |
Het |
Atp13a5 |
C |
A |
16: 29,055,995 (GRCm39) |
R1100L |
probably benign |
Het |
Atp6v1a |
A |
G |
16: 43,920,309 (GRCm39) |
V429A |
probably damaging |
Het |
Caml |
A |
G |
13: 55,776,445 (GRCm39) |
Y228C |
probably damaging |
Het |
Ccdc14 |
A |
G |
16: 34,543,958 (GRCm39) |
E772G |
probably damaging |
Het |
Ccdc96 |
A |
G |
5: 36,643,194 (GRCm39) |
E400G |
probably damaging |
Het |
Ces1h |
T |
A |
8: 94,090,254 (GRCm39) |
E266V |
probably benign |
Het |
CN725425 |
T |
A |
15: 91,129,980 (GRCm39) |
I281N |
possibly damaging |
Het |
Cngb3 |
A |
T |
4: 19,283,579 (GRCm39) |
E62V |
probably null |
Het |
Cops5 |
T |
A |
1: 10,108,235 (GRCm39) |
|
probably benign |
Het |
Crhr2 |
T |
A |
6: 55,077,667 (GRCm39) |
I232F |
possibly damaging |
Het |
Cxcl3 |
C |
T |
5: 90,934,175 (GRCm39) |
|
probably benign |
Het |
Ddx31 |
T |
A |
2: 28,749,902 (GRCm39) |
I308N |
probably damaging |
Het |
Efcab14 |
T |
A |
4: 115,613,664 (GRCm39) |
V204D |
probably damaging |
Het |
Emsy |
T |
C |
7: 98,268,590 (GRCm39) |
T484A |
probably damaging |
Het |
Ep400 |
A |
T |
5: 110,830,732 (GRCm39) |
I2257N |
unknown |
Het |
Epb41l4a |
T |
A |
18: 33,961,783 (GRCm39) |
Q420L |
possibly damaging |
Het |
Fat4 |
A |
G |
3: 39,037,355 (GRCm39) |
D3669G |
probably benign |
Het |
Fmnl2 |
C |
A |
2: 53,004,211 (GRCm39) |
T607K |
probably damaging |
Het |
Glod4 |
T |
C |
11: 76,125,297 (GRCm39) |
Y135C |
probably damaging |
Het |
Gm10912 |
A |
G |
2: 103,896,961 (GRCm39) |
I33M |
possibly damaging |
Het |
Gm5592 |
T |
C |
7: 40,865,036 (GRCm39) |
|
probably benign |
Het |
Gria4 |
A |
G |
9: 4,456,122 (GRCm39) |
L726P |
probably damaging |
Het |
H2-M10.4 |
T |
C |
17: 36,771,518 (GRCm39) |
E220G |
probably benign |
Het |
Itga1 |
T |
G |
13: 115,103,126 (GRCm39) |
N1102H |
probably benign |
Het |
Itpk1 |
A |
G |
12: 102,554,812 (GRCm39) |
I6T |
probably damaging |
Het |
Kcnh4 |
T |
C |
11: 100,636,148 (GRCm39) |
D833G |
probably damaging |
Het |
Kdm1a |
T |
C |
4: 136,296,012 (GRCm39) |
|
probably null |
Het |
Kif24 |
G |
A |
4: 41,428,670 (GRCm39) |
Q97* |
probably null |
Het |
Klhl2 |
T |
C |
8: 65,202,762 (GRCm39) |
I479V |
probably benign |
Het |
Large1 |
T |
C |
8: 73,578,828 (GRCm39) |
Y459C |
probably damaging |
Het |
Lcn8 |
T |
G |
2: 25,545,509 (GRCm39) |
L169R |
probably damaging |
Het |
Loxl3 |
T |
G |
6: 83,014,492 (GRCm39) |
S133R |
probably damaging |
Het |
Lyzl4 |
A |
G |
9: 121,413,529 (GRCm39) |
Y4H |
unknown |
Het |
Marchf7 |
A |
G |
2: 60,071,331 (GRCm39) |
K612E |
probably damaging |
Het |
Mreg |
C |
T |
1: 72,231,359 (GRCm39) |
G33D |
probably benign |
Het |
Ms4a6c |
A |
C |
19: 11,457,863 (GRCm39) |
|
probably benign |
Het |
Nrbf2 |
G |
A |
10: 67,103,299 (GRCm39) |
S268F |
possibly damaging |
Het |
Oog4 |
T |
A |
4: 143,164,293 (GRCm39) |
I341F |
probably benign |
Het |
Or4k5 |
A |
G |
14: 50,386,220 (GRCm39) |
V37A |
probably benign |
Het |
Or5h26 |
A |
G |
16: 58,988,482 (GRCm39) |
L8P |
probably benign |
Het |
Or5h27 |
C |
T |
16: 59,006,091 (GRCm39) |
V252I |
unknown |
Het |
Or5l14 |
A |
T |
2: 87,792,946 (GRCm39) |
C97S |
probably damaging |
Het |
Pcdhb5 |
G |
A |
18: 37,454,523 (GRCm39) |
R301Q |
probably benign |
Het |
Podn |
T |
C |
4: 107,878,910 (GRCm39) |
K174R |
possibly damaging |
Het |
Pphln1 |
T |
C |
15: 93,353,413 (GRCm39) |
|
probably null |
Het |
Ppp2r1a |
C |
G |
17: 21,179,675 (GRCm39) |
H112D |
possibly damaging |
Het |
Prmt5 |
A |
G |
14: 54,752,344 (GRCm39) |
F151L |
possibly damaging |
Het |
Ptch1 |
A |
T |
13: 63,721,233 (GRCm39) |
|
probably benign |
Het |
Rgl2 |
A |
G |
17: 34,151,012 (GRCm39) |
|
probably null |
Het |
Ryr2 |
A |
T |
13: 11,675,008 (GRCm39) |
I3373N |
probably damaging |
Het |
Scap |
A |
G |
9: 110,213,664 (GRCm39) |
N1209S |
probably benign |
Het |
Sin3b |
T |
C |
8: 73,457,793 (GRCm39) |
S170P |
probably damaging |
Het |
Slc22a4 |
A |
T |
11: 53,886,854 (GRCm39) |
I296N |
probably damaging |
Het |
Slco1a8 |
T |
A |
6: 141,940,008 (GRCm39) |
N145I |
probably damaging |
Het |
Slco2a1 |
T |
C |
9: 102,923,989 (GRCm39) |
S68P |
probably damaging |
Het |
Snx8 |
A |
G |
5: 140,339,235 (GRCm39) |
C161R |
probably benign |
Het |
Spryd3 |
C |
T |
15: 102,026,630 (GRCm39) |
C347Y |
probably benign |
Het |
Srsf11 |
C |
T |
3: 157,728,981 (GRCm39) |
|
probably benign |
Het |
Strn3 |
T |
C |
12: 51,676,279 (GRCm39) |
T333A |
probably benign |
Het |
Swt1 |
T |
A |
1: 151,286,921 (GRCm39) |
E190D |
probably benign |
Het |
Tchh |
A |
T |
3: 93,352,644 (GRCm39) |
I695F |
unknown |
Het |
Tfap4 |
G |
A |
16: 4,363,493 (GRCm39) |
S314L |
possibly damaging |
Het |
Tigd3 |
G |
T |
19: 5,941,894 (GRCm39) |
T412K |
probably benign |
Het |
Tmem184b |
T |
A |
15: 79,249,681 (GRCm39) |
|
probably null |
Het |
Trpa1 |
T |
C |
1: 14,968,359 (GRCm39) |
D469G |
probably benign |
Het |
Tssk1 |
T |
C |
16: 17,712,565 (GRCm39) |
F117L |
probably damaging |
Het |
Tuba3b |
T |
A |
6: 145,565,471 (GRCm39) |
M313K |
probably damaging |
Het |
Tubgcp6 |
T |
C |
15: 88,993,420 (GRCm39) |
|
probably null |
Het |
Vav1 |
A |
G |
17: 57,608,870 (GRCm39) |
K345E |
possibly damaging |
Het |
Zdhhc4 |
G |
A |
5: 143,310,641 (GRCm39) |
R64C |
probably damaging |
Het |
Zfp280d |
T |
A |
9: 72,269,614 (GRCm39) |
L892* |
probably null |
Het |
Zfp46 |
T |
A |
4: 136,014,528 (GRCm39) |
M3K |
probably damaging |
Het |
Zfp607b |
C |
A |
7: 27,401,841 (GRCm39) |
P99Q |
probably benign |
Het |
Zfp647 |
G |
A |
15: 76,796,285 (GRCm39) |
P125L |
probably damaging |
Het |
Zfp990 |
T |
A |
4: 145,264,613 (GRCm39) |
I537N |
probably damaging |
Het |
|
Other mutations in Chd5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00537:Chd5
|
APN |
4 |
152,445,059 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00886:Chd5
|
APN |
4 |
152,444,156 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00963:Chd5
|
APN |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01399:Chd5
|
APN |
4 |
152,441,144 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01571:Chd5
|
APN |
4 |
152,468,572 (GRCm39) |
splice site |
probably benign |
|
IGL01606:Chd5
|
APN |
4 |
152,445,432 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01636:Chd5
|
APN |
4 |
152,469,110 (GRCm39) |
nonsense |
probably null |
|
IGL02009:Chd5
|
APN |
4 |
152,450,670 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02417:Chd5
|
APN |
4 |
152,451,751 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02504:Chd5
|
APN |
4 |
152,447,779 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02508:Chd5
|
APN |
4 |
152,447,481 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02597:Chd5
|
APN |
4 |
152,456,169 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02608:Chd5
|
APN |
4 |
152,440,564 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02612:Chd5
|
APN |
4 |
152,445,033 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02658:Chd5
|
APN |
4 |
152,445,050 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02662:Chd5
|
APN |
4 |
152,456,588 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02676:Chd5
|
APN |
4 |
152,440,530 (GRCm39) |
splice site |
probably benign |
|
IGL02871:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02942:Chd5
|
APN |
4 |
152,470,182 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02956:Chd5
|
APN |
4 |
152,464,413 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03286:Chd5
|
APN |
4 |
152,469,952 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03348:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03398:Chd5
|
APN |
4 |
152,461,539 (GRCm39) |
missense |
probably damaging |
0.97 |
PIT1430001:Chd5
|
UTSW |
4 |
152,455,094 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4151001:Chd5
|
UTSW |
4 |
152,462,986 (GRCm39) |
missense |
probably damaging |
0.99 |
R0079:Chd5
|
UTSW |
4 |
152,470,206 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0379:Chd5
|
UTSW |
4 |
152,467,778 (GRCm39) |
missense |
probably benign |
0.00 |
R0388:Chd5
|
UTSW |
4 |
152,456,101 (GRCm39) |
missense |
probably damaging |
1.00 |
R0675:Chd5
|
UTSW |
4 |
152,470,407 (GRCm39) |
missense |
probably benign |
0.06 |
R0730:Chd5
|
UTSW |
4 |
152,432,441 (GRCm39) |
missense |
possibly damaging |
0.72 |
R0799:Chd5
|
UTSW |
4 |
152,468,616 (GRCm39) |
missense |
probably damaging |
1.00 |
R0800:Chd5
|
UTSW |
4 |
152,440,614 (GRCm39) |
missense |
probably damaging |
1.00 |
R1276:Chd5
|
UTSW |
4 |
152,463,191 (GRCm39) |
missense |
probably damaging |
1.00 |
R1752:Chd5
|
UTSW |
4 |
152,459,590 (GRCm39) |
missense |
probably damaging |
1.00 |
R1753:Chd5
|
UTSW |
4 |
152,463,272 (GRCm39) |
missense |
probably damaging |
1.00 |
R1843:Chd5
|
UTSW |
4 |
152,470,263 (GRCm39) |
missense |
probably damaging |
1.00 |
R1850:Chd5
|
UTSW |
4 |
152,454,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R1851:Chd5
|
UTSW |
4 |
152,462,727 (GRCm39) |
missense |
probably damaging |
0.97 |
R1859:Chd5
|
UTSW |
4 |
152,464,980 (GRCm39) |
missense |
probably benign |
0.00 |
R1983:Chd5
|
UTSW |
4 |
152,469,123 (GRCm39) |
missense |
possibly damaging |
0.89 |
R2404:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R2897:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R2898:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R3893:Chd5
|
UTSW |
4 |
152,445,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R3938:Chd5
|
UTSW |
4 |
152,461,512 (GRCm39) |
missense |
probably benign |
0.05 |
R4707:Chd5
|
UTSW |
4 |
152,445,039 (GRCm39) |
missense |
probably damaging |
1.00 |
R4754:Chd5
|
UTSW |
4 |
152,462,203 (GRCm39) |
missense |
probably damaging |
0.99 |
R4911:Chd5
|
UTSW |
4 |
152,445,129 (GRCm39) |
missense |
probably damaging |
1.00 |
R4924:Chd5
|
UTSW |
4 |
152,450,886 (GRCm39) |
missense |
possibly damaging |
0.50 |
R4926:Chd5
|
UTSW |
4 |
152,467,768 (GRCm39) |
missense |
probably benign |
0.00 |
R5256:Chd5
|
UTSW |
4 |
152,456,554 (GRCm39) |
missense |
probably benign |
0.01 |
R5524:Chd5
|
UTSW |
4 |
152,461,087 (GRCm39) |
missense |
probably benign |
|
R5552:Chd5
|
UTSW |
4 |
152,470,272 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5895:Chd5
|
UTSW |
4 |
152,464,389 (GRCm39) |
missense |
probably benign |
0.13 |
R6007:Chd5
|
UTSW |
4 |
152,463,878 (GRCm39) |
missense |
probably null |
1.00 |
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6172:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6173:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6323:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
0.99 |
R6331:Chd5
|
UTSW |
4 |
152,466,865 (GRCm39) |
missense |
probably benign |
0.02 |
R6495:Chd5
|
UTSW |
4 |
152,451,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R6528:Chd5
|
UTSW |
4 |
152,441,133 (GRCm39) |
missense |
probably damaging |
1.00 |
R6849:Chd5
|
UTSW |
4 |
152,462,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R6854:Chd5
|
UTSW |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R6859:Chd5
|
UTSW |
4 |
152,462,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R6999:Chd5
|
UTSW |
4 |
152,458,891 (GRCm39) |
missense |
probably damaging |
1.00 |
R7034:Chd5
|
UTSW |
4 |
152,445,398 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7110:Chd5
|
UTSW |
4 |
152,469,896 (GRCm39) |
missense |
probably damaging |
1.00 |
R7361:Chd5
|
UTSW |
4 |
152,447,745 (GRCm39) |
missense |
probably damaging |
0.99 |
R7397:Chd5
|
UTSW |
4 |
152,452,469 (GRCm39) |
missense |
possibly damaging |
0.82 |
R7440:Chd5
|
UTSW |
4 |
152,469,108 (GRCm39) |
missense |
probably benign |
0.01 |
R7489:Chd5
|
UTSW |
4 |
152,457,925 (GRCm39) |
missense |
probably damaging |
1.00 |
R7810:Chd5
|
UTSW |
4 |
152,443,032 (GRCm39) |
missense |
probably damaging |
0.97 |
R8057:Chd5
|
UTSW |
4 |
152,450,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R8078:Chd5
|
UTSW |
4 |
152,445,448 (GRCm39) |
missense |
possibly damaging |
0.90 |
R8092:Chd5
|
UTSW |
4 |
152,463,261 (GRCm39) |
missense |
probably damaging |
0.99 |
R8170:Chd5
|
UTSW |
4 |
152,461,040 (GRCm39) |
missense |
probably benign |
0.26 |
R8255:Chd5
|
UTSW |
4 |
152,463,880 (GRCm39) |
missense |
probably damaging |
0.99 |
R8348:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8448:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8478:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8482:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8670:Chd5
|
UTSW |
4 |
152,469,953 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8733:Chd5
|
UTSW |
4 |
152,463,923 (GRCm39) |
missense |
probably damaging |
1.00 |
R8743:Chd5
|
UTSW |
4 |
152,450,862 (GRCm39) |
missense |
probably benign |
0.03 |
R8941:Chd5
|
UTSW |
4 |
152,463,305 (GRCm39) |
missense |
possibly damaging |
0.82 |
R8961:Chd5
|
UTSW |
4 |
152,467,489 (GRCm39) |
splice site |
probably benign |
|
R9103:Chd5
|
UTSW |
4 |
152,461,444 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9160:Chd5
|
UTSW |
4 |
152,469,916 (GRCm39) |
missense |
probably damaging |
0.99 |
R9221:Chd5
|
UTSW |
4 |
152,456,122 (GRCm39) |
missense |
probably damaging |
0.96 |
R9399:Chd5
|
UTSW |
4 |
152,468,592 (GRCm39) |
missense |
probably benign |
0.06 |
R9429:Chd5
|
UTSW |
4 |
152,447,364 (GRCm39) |
missense |
probably damaging |
0.99 |
R9635:Chd5
|
UTSW |
4 |
152,461,079 (GRCm39) |
missense |
possibly damaging |
0.87 |
R9783:Chd5
|
UTSW |
4 |
152,458,865 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Chd5
|
UTSW |
4 |
152,462,936 (GRCm39) |
missense |
probably damaging |
0.98 |
|
Predicted Primers |
PCR Primer
(F):5'- CATGGCATTCTCAGTCTTGTGG -3'
(R):5'- CAAATTGGGTGGCACGTGTG -3'
Sequencing Primer
(F):5'- TGTCTCTGAGAGGTGACCAC -3'
(R):5'- CACTGTGGGTTACACGTT -3'
|
Posted On |
2017-02-28 |