Incidental Mutation 'R5916:Trappc12'
ID 461349
Institutional Source Beutler Lab
Gene Symbol Trappc12
Ensembl Gene ENSMUSG00000020628
Gene Name trafficking protein particle complex 12
Synonyms CGI-87, Ttc15, D930014A20Rik
MMRRC Submission 044113-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.366) question?
Stock # R5916 (G1)
Quality Score 210
Status Not validated
Chromosome 12
Chromosomal Location 28740627-28800471 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 28741513 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Proline at position 732 (L732P)
Ref Sequence ENSEMBL: ENSMUSP00000127752 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020954] [ENSMUST00000168129]
AlphaFold Q8K2L8
Predicted Effect probably damaging
Transcript: ENSMUST00000020954
AA Change: L732P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000020954
Gene: ENSMUSG00000020628
AA Change: L732P

DomainStartEndE-ValueType
low complexity region 7 23 N/A INTRINSIC
low complexity region 183 196 N/A INTRINSIC
low complexity region 232 245 N/A INTRINSIC
low complexity region 271 282 N/A INTRINSIC
TPR 607 640 3.67e-3 SMART
TPR 642 675 1.44e1 SMART
TPR 682 715 3.37e-2 SMART
TPR 716 749 2.99e1 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000168129
AA Change: L732P

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000127752
Gene: ENSMUSG00000020628
AA Change: L732P

DomainStartEndE-ValueType
low complexity region 7 23 N/A INTRINSIC
low complexity region 183 196 N/A INTRINSIC
low complexity region 232 245 N/A INTRINSIC
low complexity region 271 282 N/A INTRINSIC
TPR 607 640 3.67e-3 SMART
TPR 642 675 1.44e1 SMART
TPR 682 715 3.37e-2 SMART
TPR 716 749 2.99e1 SMART
Coding Region Coverage
  • 1x: 99.8%
  • 3x: 99.3%
  • 10x: 97.2%
  • 20x: 92.4%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aadacl4 A T 4: 144,349,550 (GRCm39) N269I possibly damaging Het
Abcc1 G T 16: 14,283,006 (GRCm39) V1161F possibly damaging Het
Adam3 A T 8: 25,174,555 (GRCm39) probably null Het
Agt A T 8: 125,290,597 (GRCm39) S237T possibly damaging Het
Ano3 A T 2: 110,512,181 (GRCm39) F674L probably benign Het
Asb2 G T 12: 103,290,135 (GRCm39) A504E probably damaging Het
Atp13a1 T A 8: 70,259,748 (GRCm39) I1113N probably damaging Het
Atxn7l2 T C 3: 108,112,978 (GRCm39) probably null Het
Bambi A G 18: 3,511,463 (GRCm39) T95A probably benign Het
Cfap210 A T 2: 69,619,806 (GRCm39) M1K probably null Het
Clrn1 T C 3: 58,753,783 (GRCm39) T193A probably benign Het
Colgalt2 T A 1: 152,379,873 (GRCm39) D437E probably damaging Het
Dchs1 C A 7: 105,408,373 (GRCm39) A1820S probably damaging Het
Dnah12 T A 14: 26,428,073 (GRCm39) I233N possibly damaging Het
Dsc3 T C 18: 20,120,077 (GRCm39) N194D probably damaging Het
Dync2h1 A G 9: 7,102,309 (GRCm39) probably null Het
Erich3 A T 3: 154,401,460 (GRCm39) R36S probably damaging Het
Fam243 T A 16: 92,117,559 (GRCm39) E243V probably damaging Het
Fmnl3 A T 15: 99,219,709 (GRCm39) C680S probably damaging Het
Focad T C 4: 88,275,778 (GRCm39) L1129P unknown Het
Fzd3 G A 14: 65,440,178 (GRCm39) T664I probably benign Het
Glb1l3 T C 9: 26,766,032 (GRCm39) I129V probably benign Het
Heatr1 T C 13: 12,449,352 (GRCm39) F1950S probably damaging Het
Herc6 G A 6: 57,623,188 (GRCm39) G597E probably benign Het
Hmcn2 T A 2: 31,286,151 (GRCm39) V2101D probably damaging Het
Il17re T A 6: 113,447,084 (GRCm39) C612S probably damaging Het
Il36g T G 2: 24,082,806 (GRCm39) *194E probably null Het
Junb T C 8: 85,704,505 (GRCm39) Y185C probably benign Het
Lrriq1 G A 10: 103,057,243 (GRCm39) Q186* probably null Het
Lrrn2 T A 1: 132,865,538 (GRCm39) V201E probably damaging Het
Ly6l A T 15: 75,323,027 (GRCm39) T68S probably benign Het
Marchf1 G T 8: 66,839,763 (GRCm39) R182L possibly damaging Het
Megf6 A G 4: 154,333,882 (GRCm39) probably null Het
Mga T A 2: 119,794,793 (GRCm39) S2708T probably benign Het
Mx1 T C 16: 97,252,933 (GRCm39) T396A probably benign Het
Naip5 A C 13: 100,359,209 (GRCm39) S676A probably benign Het
Npepl1 G T 2: 173,963,337 (GRCm39) W456C probably benign Het
Ntrk2 A G 13: 58,956,543 (GRCm39) M1V probably null Het
Nufip1 T C 14: 76,372,340 (GRCm39) *485Q probably null Het
Ocln T G 13: 100,642,687 (GRCm39) D216A possibly damaging Het
Or10x1 A T 1: 174,196,698 (GRCm39) T72S probably damaging Het
Or1o11 C T 17: 37,756,570 (GRCm39) L53F probably benign Het
Or4f57 A G 2: 111,791,175 (GRCm39) M81T probably damaging Het
Or55b4 G A 7: 102,133,586 (GRCm39) S247F probably damaging Het
Ptprq A T 10: 107,359,374 (GRCm39) M2243K probably damaging Het
Rad51b C T 12: 79,371,856 (GRCm39) Q190* probably null Het
Resf1 C T 6: 149,228,076 (GRCm39) T374I probably damaging Het
Rfx8 T C 1: 39,727,779 (GRCm39) Y182C probably benign Het
Rpgrip1l C A 8: 91,979,541 (GRCm39) R967L possibly damaging Het
Scube2 A G 7: 109,430,931 (GRCm39) Y423H possibly damaging Het
Sipa1l2 A T 8: 126,195,312 (GRCm39) Y809N probably damaging Het
Slc35f1 C A 10: 52,809,317 (GRCm39) Y101* probably null Het
Tbc1d22a A G 15: 86,098,809 (GRCm39) K12E possibly damaging Het
Tent2 T C 13: 93,312,055 (GRCm39) D215G probably damaging Het
Tmcc2 C T 1: 132,285,429 (GRCm39) V646M probably damaging Het
Tpp1 A T 7: 105,398,587 (GRCm39) M243K probably damaging Het
U2af2 A T 7: 5,082,179 (GRCm39) probably null Het
Utrn T A 10: 12,540,795 (GRCm39) N1877Y probably damaging Het
Vsir C T 10: 60,193,816 (GRCm39) T93I probably damaging Het
Zkscan5 T A 5: 145,142,112 (GRCm39) M3K possibly damaging Het
Zscan29 G T 2: 120,994,518 (GRCm39) T489N probably damaging Het
Other mutations in Trappc12
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00418:Trappc12 APN 12 28,787,835 (GRCm39) missense probably damaging 0.99
IGL01018:Trappc12 APN 12 28,741,853 (GRCm39) splice site probably benign
IGL01295:Trappc12 APN 12 28,796,761 (GRCm39) missense probably damaging 1.00
IGL01365:Trappc12 APN 12 28,797,401 (GRCm39) missense probably damaging 1.00
IGL01490:Trappc12 APN 12 28,796,914 (GRCm39) missense probably damaging 1.00
IGL01975:Trappc12 APN 12 28,742,491 (GRCm39) critical splice donor site probably null
IGL02851:Trappc12 APN 12 28,741,405 (GRCm39) missense probably damaging 0.98
IGL02885:Trappc12 APN 12 28,797,013 (GRCm39) missense probably benign
IGL03163:Trappc12 APN 12 28,796,653 (GRCm39) missense probably damaging 1.00
R0102:Trappc12 UTSW 12 28,796,751 (GRCm39) missense probably damaging 1.00
R0102:Trappc12 UTSW 12 28,796,751 (GRCm39) missense probably damaging 1.00
R0330:Trappc12 UTSW 12 28,797,259 (GRCm39) missense probably benign 0.00
R0517:Trappc12 UTSW 12 28,747,133 (GRCm39) splice site probably benign
R0837:Trappc12 UTSW 12 28,753,596 (GRCm39) missense possibly damaging 0.92
R1439:Trappc12 UTSW 12 28,797,160 (GRCm39) missense possibly damaging 0.96
R1477:Trappc12 UTSW 12 28,787,751 (GRCm39) missense probably benign 0.25
R1651:Trappc12 UTSW 12 28,741,776 (GRCm39) missense probably benign 0.32
R1899:Trappc12 UTSW 12 28,796,984 (GRCm39) missense probably damaging 0.97
R1900:Trappc12 UTSW 12 28,796,984 (GRCm39) missense probably damaging 0.97
R2133:Trappc12 UTSW 12 28,796,597 (GRCm39) missense probably benign 0.00
R2174:Trappc12 UTSW 12 28,797,380 (GRCm39) missense possibly damaging 0.94
R4449:Trappc12 UTSW 12 28,797,234 (GRCm39) missense probably benign 0.05
R5031:Trappc12 UTSW 12 28,742,512 (GRCm39) missense possibly damaging 0.86
R5209:Trappc12 UTSW 12 28,787,793 (GRCm39) missense probably benign 0.03
R5220:Trappc12 UTSW 12 28,796,696 (GRCm39) missense probably damaging 0.97
R5458:Trappc12 UTSW 12 28,796,389 (GRCm39) missense probably damaging 0.98
R5471:Trappc12 UTSW 12 28,741,499 (GRCm39) missense probably damaging 1.00
R5482:Trappc12 UTSW 12 28,741,324 (GRCm39) missense probably damaging 0.97
R5808:Trappc12 UTSW 12 28,796,863 (GRCm39) missense probably damaging 1.00
R5996:Trappc12 UTSW 12 28,797,113 (GRCm39) missense possibly damaging 0.83
R6378:Trappc12 UTSW 12 28,797,082 (GRCm39) missense probably damaging 0.97
R7669:Trappc12 UTSW 12 28,761,957 (GRCm39) missense probably benign 0.30
R9233:Trappc12 UTSW 12 28,772,414 (GRCm39) missense possibly damaging 0.88
R9323:Trappc12 UTSW 12 28,742,491 (GRCm39) critical splice donor site probably null
R9361:Trappc12 UTSW 12 28,796,417 (GRCm39) missense probably damaging 0.99
R9550:Trappc12 UTSW 12 28,761,985 (GRCm39) critical splice acceptor site probably null
R9784:Trappc12 UTSW 12 28,797,457 (GRCm39) missense probably benign 0.33
Predicted Primers PCR Primer
(F):5'- GGAACTAAGCCAGCTTCAGG -3'
(R):5'- GCTGACCAGTAATCCCAGAC -3'

Sequencing Primer
(F):5'- CACTGTGTGTTGAAGCTGTCCC -3'
(R):5'- TGACCAGTAATCCCAGACTCCTG -3'
Posted On 2017-02-28