Mutagenetix > Incidental Mutation

Incidental Mutation 'R2870:Cyp4a30b'

475554

Institutional Source

Beutler Lab

Gene Symbol

Cyp4a30b

Ensembl Gene

ENSMUSG00000084346

Gene Name

cytochrome P450, family 4, subfamily a, polypeptide 30b

Synonyms

Cyp4a30b-ps, OTTMUSG00000008626

MMRRC Submission

040458-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.099) question?

Stock #

R2870 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

115309801-115328259 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 115315559 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Arginine at position 260 (H260R)

Ref Sequence

ENSEMBL: ENSMUSP00000140857 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000119958]

AlphaFold

A0A087WS15

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000116278

Predicted Effect

possibly damaging
Transcript: ENSMUST00000119958
AA Change: H260R

PolyPhen 2 Score 0.638 (Sensitivity: 0.87; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000140857
Gene: ENSMUSG00000084346
AA Change: H260R

Domain	Start	End	E-Value	Type
transmembrane domain	10	32	N/A	INTRINSIC
Pfam:p450	52	503	1.4e-119	PFAM

Coding Region Coverage

1x: 99.1%
3x: 98.6%
10x: 97.3%
20x: 95.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 87 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Actrt3	A	G	3: 30,653,847 (GRCm39)	V51A	probably damaging	Het
Adgb	C	T	10: 10,307,025 (GRCm39)		probably null	Het
Als2	A	G	1: 59,250,296 (GRCm39)	S483P	probably damaging	Het
Ankrd10	C	T	8: 11,665,682 (GRCm39)	R306H	probably damaging	Het
Arhgef10	T	C	8: 15,025,093 (GRCm39)		probably null	Het
Arhgef10	A	G	8: 15,025,666 (GRCm39)	I459V	probably benign	Het
Armc2	C	T	10: 41,842,696 (GRCm39)		probably null	Het
Atp12a	A	G	14: 56,624,407 (GRCm39)	R952G	possibly damaging	Het
Atp6v1g1	A	G	4: 63,468,258 (GRCm39)	Y87C	probably benign	Het
C030034I22Rik	T	A	17: 69,725,106 (GRCm39)		noncoding transcript	Het
Cacna2d1	G	A	5: 16,517,566 (GRCm39)	C404Y	probably damaging	Het
Ccdc163	T	C	4: 116,599,058 (GRCm39)		silent	Het
Ccdc59	A	T	10: 105,677,388 (GRCm39)	K9M	possibly damaging	Het
Cd6	A	G	19: 10,771,990 (GRCm39)	I307T	possibly damaging	Het
Cimap1d	G	A	10: 79,481,487 (GRCm39)	T14I	probably benign	Het
Clasrp	C	A	7: 19,319,165 (GRCm39)		probably benign	Het
Csmd2	T	C	4: 128,451,511 (GRCm39)	F113S	unknown	Het
Csmd3	C	T	15: 47,721,320 (GRCm39)	G1437D	probably damaging	Het
Cyp4a14	C	A	4: 115,344,498 (GRCm39)	G456W	probably damaging	Het
Dcp1b	C	T	6: 119,191,735 (GRCm39)	S217L	probably benign	Het
Dennd2b	A	T	7: 109,156,637 (GRCm39)	Y38N	probably benign	Het
Dhx57	A	T	17: 80,558,805 (GRCm39)	D1051E	probably benign	Het
Dmp1	A	G	5: 104,359,974 (GRCm39)	S217G	probably benign	Het
Eif4enif1	C	T	11: 3,192,586 (GRCm39)	P805S	probably damaging	Het
Eral1	A	G	11: 77,967,104 (GRCm39)	I164T	possibly damaging	Het
Esr1	G	A	10: 4,947,890 (GRCm39)	R481H	probably damaging	Het
Fan1	A	G	7: 64,012,938 (GRCm39)	I668T	probably benign	Het
Gbp11	C	T	5: 105,478,866 (GRCm39)	D191N	probably benign	Het
Gm21759	T	A	5: 8,230,863 (GRCm39)		probably benign	Het
Gm5454	C	A	13: 103,494,031 (GRCm39)		noncoding transcript	Het
Gm9874	A	T	17: 30,704,763 (GRCm39)		probably benign	Het
Gria2	G	A	3: 80,609,799 (GRCm39)	T670I	probably damaging	Het
Gria4	T	A	9: 4,503,614 (GRCm39)	N334I	probably damaging	Het
Grm5	T	C	7: 87,251,930 (GRCm39)	V60A	possibly damaging	Het
Ift172	C	T	5: 31,415,205 (GRCm39)	V1335I	probably benign	Het
Ino80d	C	T	1: 63,100,198 (GRCm39)		probably null	Het
Kif1c	A	G	11: 70,614,907 (GRCm39)	E567G	probably damaging	Het
Krt31	T	G	11: 99,938,699 (GRCm39)	N298T	possibly damaging	Het
Mapk7	C	A	11: 61,381,038 (GRCm39)		probably benign	Het
Marchf8	C	T	6: 116,378,106 (GRCm39)		probably benign	Het
Matr3	T	A	18: 35,705,349 (GRCm39)	S91R	probably benign	Het
Mdm1	A	G	10: 117,986,847 (GRCm39)	T267A	probably benign	Het
Mlxip	A	G	5: 123,590,730 (GRCm39)	M878V	probably benign	Het
Mtm1	T	C	X: 70,339,968 (GRCm39)		probably benign	Homo
Mtor	T	A	4: 148,624,487 (GRCm39)	M2089K	probably benign	Het
Mylk2	A	G	2: 152,761,268 (GRCm39)	K457R	probably damaging	Het
Nell1	A	T	7: 49,899,405 (GRCm39)		probably benign	Het
Nomo1	C	A	7: 45,696,361 (GRCm39)	T293N	probably damaging	Het
Or10g1	T	G	14: 52,648,318 (GRCm39)	T4P	probably benign	Het
Or6c211	A	T	10: 129,505,628 (GRCm39)	C253*	probably null	Het
Or8k33	T	C	2: 86,383,928 (GRCm39)	D180G	possibly damaging	Het
Ostc	T	C	3: 130,497,157 (GRCm39)	N80S	probably damaging	Het
Otud4	T	A	8: 80,387,702 (GRCm39)	N300K	possibly damaging	Het
Otx1	A	G	11: 21,948,681 (GRCm39)		probably benign	Het
Palmd	T	C	3: 116,717,400 (GRCm39)	R366G	possibly damaging	Het
Pcdhb20	A	T	18: 37,638,833 (GRCm39)	Q453L	possibly damaging	Het
Pcdhga9	T	A	18: 37,870,524 (GRCm39)	Y118N	possibly damaging	Het
Pes1	C	A	11: 3,926,834 (GRCm39)	T372K	probably benign	Het
Plcl1	A	T	1: 55,736,309 (GRCm39)	D550V	probably benign	Het
Plekhg5	T	A	4: 152,191,960 (GRCm39)	C433S	probably benign	Het
Plin2	A	G	4: 86,586,915 (GRCm39)	M1T	probably null	Het
Pold1	C	T	7: 44,192,771 (GRCm39)		silent	Het
Ppp1r7	T	A	1: 93,285,585 (GRCm39)		probably null	Het
Psmb8	T	C	17: 34,419,144 (GRCm39)	I146T	probably damaging	Het
Pzp	A	T	6: 128,462,519 (GRCm39)		probably null	Het
Rel	T	C	11: 23,711,129 (GRCm39)	I13V	probably benign	Het
Reln	C	T	5: 22,254,789 (GRCm39)	V527I	possibly damaging	Het
Retnla	A	G	16: 48,663,975 (GRCm39)	R90G	probably benign	Het
Semp2l2b	A	T	10: 21,943,278 (GRCm39)	I234N	probably benign	Het
Shoc1	A	C	4: 59,093,850 (GRCm39)	L226R	probably damaging	Het
Slc39a8	T	A	3: 135,592,554 (GRCm39)		probably null	Het
Slc5a8	A	G	10: 88,740,825 (GRCm39)	I247V	probably benign	Het
Son	A	G	16: 91,461,205 (GRCm39)		probably null	Het
Spcs2	T	C	7: 99,488,968 (GRCm39)	D240G	probably damaging	Het
Stx3	A	T	19: 11,766,938 (GRCm39)	V91D	probably damaging	Het
Taf6l	A	G	19: 8,755,992 (GRCm39)		probably benign	Het
Tafa2	A	T	10: 123,540,270 (GRCm39)	H42L	possibly damaging	Het
Tbc1d8	A	G	1: 39,444,398 (GRCm39)	F187S	probably damaging	Het
Thbs1	C	G	2: 117,949,859 (GRCm39)	N611K	probably damaging	Het
Tipin	A	C	9: 64,211,609 (GRCm39)	S232R	probably benign	Het
Tmem132b	A	G	5: 125,715,332 (GRCm39)	D347G	probably benign	Het
Tmem161a	C	T	8: 70,631,565 (GRCm39)		probably benign	Het
Vmn2r68	A	C	7: 84,882,834 (GRCm39)	M306R	probably benign	Het
Vwa7	G	A	17: 35,240,218 (GRCm39)	M395I	probably damaging	Het
Ybx3	G	A	6: 131,347,376 (GRCm39)	A253V	probably damaging	Het
Zfp53	A	T	17: 21,728,340 (GRCm39)	E124D	probably benign	Het
Zzz3	T	A	3: 152,152,481 (GRCm39)		silent	Het

Other mutations in Cyp4a30b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL03184:Cyp4a30b	APN	4	115,316,216 (GRCm39)	missense	probably damaging	1.00
IGL03233:Cyp4a30b	APN	4	115,316,167 (GRCm39)	missense	probably benign	0.08
sly	UTSW	4	115,315,493 (GRCm39)	missense	probably benign	0.00
tricky	UTSW	4	115,311,662 (GRCm39)	nonsense	probably null
R1394:Cyp4a30b	UTSW	4	115,328,089 (GRCm39)	critical splice acceptor site	probably null
R2870:Cyp4a30b	UTSW	4	115,315,559 (GRCm39)	missense	possibly damaging	0.64
R2871:Cyp4a30b	UTSW	4	115,315,559 (GRCm39)	missense	possibly damaging	0.64
R2871:Cyp4a30b	UTSW	4	115,315,559 (GRCm39)	missense	possibly damaging	0.64
R2872:Cyp4a30b	UTSW	4	115,315,559 (GRCm39)	missense	possibly damaging	0.64
R2872:Cyp4a30b	UTSW	4	115,315,559 (GRCm39)	missense	possibly damaging	0.64
R2873:Cyp4a30b	UTSW	4	115,315,559 (GRCm39)	missense	possibly damaging	0.64
R3818:Cyp4a30b	UTSW	4	115,316,206 (GRCm39)	missense	probably damaging	1.00
R4052:Cyp4a30b	UTSW	4	115,311,539 (GRCm39)	missense	probably benign	0.00
R4684:Cyp4a30b	UTSW	4	115,312,200 (GRCm39)	missense	probably damaging	1.00
R5558:Cyp4a30b	UTSW	4	115,316,063 (GRCm39)	missense	probably damaging	1.00
R5997:Cyp4a30b	UTSW	4	115,316,588 (GRCm39)	nonsense	probably null
R6242:Cyp4a30b	UTSW	4	115,311,587 (GRCm39)	missense	possibly damaging	0.48
R6511:Cyp4a30b	UTSW	4	115,313,905 (GRCm39)	missense	probably damaging	1.00
R6759:Cyp4a30b	UTSW	4	115,318,571 (GRCm39)	missense	probably benign	0.02
R7285:Cyp4a30b	UTSW	4	115,313,848 (GRCm39)	missense	probably damaging	1.00
R8154:Cyp4a30b	UTSW	4	115,315,493 (GRCm39)	missense	probably benign	0.00
R8314:Cyp4a30b	UTSW	4	115,315,535 (GRCm39)	missense	probably benign	0.00
R8439:Cyp4a30b	UTSW	4	115,314,972 (GRCm39)	missense	probably benign	0.44
R8681:Cyp4a30b	UTSW	4	115,314,942 (GRCm39)	missense	possibly damaging	0.93
R8735:Cyp4a30b	UTSW	4	115,309,976 (GRCm39)	nonsense	probably null
R8816:Cyp4a30b	UTSW	4	115,309,834 (GRCm39)	missense	probably benign	0.23
R8845:Cyp4a30b	UTSW	4	115,315,493 (GRCm39)	missense	probably benign	0.04
R8917:Cyp4a30b	UTSW	4	115,311,662 (GRCm39)	nonsense	probably null
R9622:Cyp4a30b	UTSW	4	115,328,162 (GRCm39)	missense	probably damaging	1.00
R9672:Cyp4a30b	UTSW	4	115,316,576 (GRCm39)	missense	probably benign	0.16
R9792:Cyp4a30b	UTSW	4	115,316,167 (GRCm39)	missense	probably benign	0.01
R9793:Cyp4a30b	UTSW	4	115,316,167 (GRCm39)	missense	probably benign	0.01
Z1176:Cyp4a30b	UTSW	4	115,328,156 (GRCm39)	missense	possibly damaging	0.61

Predicted Primers

Posted On

2017-05-11