Incidental Mutation 'R6066:Misp'
ID |
484046 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Misp
|
Ensembl Gene |
ENSMUSG00000035852 |
Gene Name |
mitotic spindle positioning |
Synonyms |
9130017N09Rik |
MMRRC Submission |
044230-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.075)
|
Stock # |
R6066 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
10 |
Chromosomal Location |
79656853-79666286 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 79662146 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Glycine
at position 188
(R188G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000151945
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000046833]
[ENSMUST00000169041]
[ENSMUST00000218687]
[ENSMUST00000219305]
[ENSMUST00000219734]
|
AlphaFold |
Q9D279 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000046833
AA Change: R188G
PolyPhen 2
Score 0.022 (Sensitivity: 0.95; Specificity: 0.81)
|
SMART Domains |
Protein: ENSMUSP00000048893 Gene: ENSMUSG00000035852 AA Change: R188G
Domain | Start | End | E-Value | Type |
low complexity region
|
262 |
284 |
N/A |
INTRINSIC |
Pfam:AKAP2_C
|
294 |
643 |
2.2e-140 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000169041
AA Change: R188G
PolyPhen 2
Score 0.022 (Sensitivity: 0.95; Specificity: 0.81)
|
SMART Domains |
Protein: ENSMUSP00000130071 Gene: ENSMUSG00000035852 AA Change: R188G
Domain | Start | End | E-Value | Type |
low complexity region
|
262 |
284 |
N/A |
INTRINSIC |
Pfam:AKAP2_C
|
294 |
643 |
1.7e-150 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000218531
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000218687
AA Change: R188G
PolyPhen 2
Score 0.663 (Sensitivity: 0.86; Specificity: 0.91)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000219305
AA Change: R188G
PolyPhen 2
Score 0.022 (Sensitivity: 0.95; Specificity: 0.81)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000219734
|
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.5%
- 10x: 97.6%
- 20x: 92.7%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is an actin-bundling protein involved in determining cell morphology and mitotic progression. The encoded protein is required for the proper positioning of the mitotic spindle. Two transcript variants, one protein-coding and the other non-protein coding, have been found for this gene. [provided by RefSeq, Feb 2016]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acyp2 |
C |
T |
11: 30,456,354 (GRCm39) |
E98K |
possibly damaging |
Het |
Adgrb1 |
T |
C |
15: 74,412,308 (GRCm39) |
F429S |
probably damaging |
Het |
Ahi1 |
A |
T |
10: 20,835,825 (GRCm39) |
M53L |
possibly damaging |
Het |
Ahr |
A |
T |
12: 35,554,920 (GRCm39) |
F400I |
probably damaging |
Het |
Ak7 |
G |
T |
12: 105,699,750 (GRCm39) |
G223V |
possibly damaging |
Het |
Alpk3 |
A |
G |
7: 80,726,698 (GRCm39) |
I128V |
possibly damaging |
Het |
Ampd3 |
A |
T |
7: 110,392,974 (GRCm39) |
E247D |
probably benign |
Het |
Arhgap44 |
CTGCT |
CTGCTTGCT |
11: 64,922,910 (GRCm39) |
|
probably null |
Het |
Arhgef10l |
A |
G |
4: 140,304,391 (GRCm39) |
F243L |
probably damaging |
Het |
Cdh23 |
A |
T |
10: 60,269,537 (GRCm39) |
V661E |
probably damaging |
Het |
Cox8c |
A |
G |
12: 102,866,534 (GRCm39) |
T53A |
probably benign |
Het |
Creld2 |
C |
A |
15: 88,707,969 (GRCm39) |
T236K |
possibly damaging |
Het |
Cul3 |
A |
T |
1: 80,261,476 (GRCm39) |
C250S |
probably benign |
Het |
Dhx37 |
A |
C |
5: 125,501,730 (GRCm39) |
F510V |
probably benign |
Het |
Fblim1 |
T |
C |
4: 141,305,220 (GRCm39) |
D350G |
probably damaging |
Het |
Lipm |
A |
G |
19: 34,090,374 (GRCm39) |
Y185C |
probably damaging |
Het |
Mfsd4b4 |
A |
G |
10: 39,768,049 (GRCm39) |
F348S |
probably benign |
Het |
Nbeal1 |
T |
G |
1: 60,287,564 (GRCm39) |
I936S |
probably benign |
Het |
Ngly1 |
G |
A |
14: 16,294,634 (GRCm38) |
M521I |
probably benign |
Het |
Nlrp9a |
A |
T |
7: 26,257,510 (GRCm39) |
Y376F |
probably benign |
Het |
Oas3 |
T |
C |
5: 120,910,989 (GRCm39) |
K197R |
probably damaging |
Het |
Pars2 |
T |
C |
4: 106,511,276 (GRCm39) |
Y353H |
probably damaging |
Het |
Pik3r1 |
T |
C |
13: 101,822,828 (GRCm39) |
N625D |
possibly damaging |
Het |
Pkhd1l1 |
T |
A |
15: 44,391,525 (GRCm39) |
S1530R |
probably damaging |
Het |
Rsph6a |
C |
T |
7: 18,799,740 (GRCm39) |
P457L |
probably damaging |
Het |
Secisbp2 |
T |
C |
13: 51,831,258 (GRCm39) |
S565P |
probably benign |
Het |
Slc28a3 |
T |
C |
13: 58,726,301 (GRCm39) |
M163V |
probably benign |
Het |
Slc35e2 |
C |
T |
4: 155,694,483 (GRCm39) |
P10L |
probably benign |
Het |
Svil |
T |
G |
18: 5,106,724 (GRCm39) |
V1855G |
probably damaging |
Het |
Szt2 |
T |
C |
4: 118,229,171 (GRCm39) |
T2890A |
unknown |
Het |
Tatdn3 |
A |
T |
1: 190,778,465 (GRCm39) |
V242E |
probably benign |
Het |
Vmn1r22 |
T |
G |
6: 57,877,864 (GRCm39) |
M38L |
probably benign |
Het |
Vmn2r104 |
A |
G |
17: 20,258,573 (GRCm39) |
F524L |
possibly damaging |
Het |
Vmn2r94 |
A |
G |
17: 18,477,695 (GRCm39) |
S239P |
probably damaging |
Het |
Xpo7 |
T |
C |
14: 70,919,778 (GRCm39) |
D679G |
probably null |
Het |
Zbtb42 |
C |
A |
12: 112,646,041 (GRCm39) |
T72K |
probably damaging |
Het |
Zfp493 |
G |
A |
13: 67,935,069 (GRCm39) |
A341T |
possibly damaging |
Het |
Zfp811 |
A |
G |
17: 33,017,801 (GRCm39) |
C80R |
possibly damaging |
Het |
|
Other mutations in Misp |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02419:Misp
|
APN |
10 |
79,663,705 (GRCm39) |
unclassified |
probably benign |
|
IGL02565:Misp
|
APN |
10 |
79,662,177 (GRCm39) |
missense |
probably benign |
0.33 |
IGL02901:Misp
|
APN |
10 |
79,662,771 (GRCm39) |
missense |
possibly damaging |
0.70 |
R1118:Misp
|
UTSW |
10 |
79,662,969 (GRCm39) |
missense |
probably benign |
0.01 |
R1421:Misp
|
UTSW |
10 |
79,662,681 (GRCm39) |
missense |
probably damaging |
1.00 |
R1656:Misp
|
UTSW |
10 |
79,661,777 (GRCm39) |
missense |
possibly damaging |
0.75 |
R2864:Misp
|
UTSW |
10 |
79,662,872 (GRCm39) |
missense |
probably benign |
0.05 |
R3786:Misp
|
UTSW |
10 |
79,661,795 (GRCm39) |
missense |
probably benign |
0.23 |
R5035:Misp
|
UTSW |
10 |
79,663,790 (GRCm39) |
missense |
probably benign |
0.01 |
R5503:Misp
|
UTSW |
10 |
79,662,552 (GRCm39) |
missense |
probably damaging |
1.00 |
R5594:Misp
|
UTSW |
10 |
79,662,977 (GRCm39) |
missense |
probably damaging |
1.00 |
R5982:Misp
|
UTSW |
10 |
79,663,728 (GRCm39) |
nonsense |
probably null |
|
R6236:Misp
|
UTSW |
10 |
79,662,956 (GRCm39) |
missense |
probably benign |
0.00 |
R7103:Misp
|
UTSW |
10 |
79,662,999 (GRCm39) |
missense |
probably damaging |
1.00 |
R8170:Misp
|
UTSW |
10 |
79,662,300 (GRCm39) |
missense |
probably benign |
0.39 |
R8479:Misp
|
UTSW |
10 |
79,663,750 (GRCm39) |
missense |
possibly damaging |
0.91 |
R8961:Misp
|
UTSW |
10 |
79,663,823 (GRCm39) |
missense |
probably benign |
0.01 |
R9430:Misp
|
UTSW |
10 |
79,661,675 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- TATCACCTGGACGACAGCAG -3'
(R):5'- GACTGCCAGGATCATTGACTATATGG -3'
Sequencing Primer
(F):5'- GACAGCAGTGACACCCTCTG -3'
(R):5'- TCATTGACTATATGGATGGATCTAGC -3'
|
Posted On |
2017-07-14 |