Mutagenetix > Incidental Mutation

Incidental Mutation 'R5538:Or6n1'

484527

Institutional Source

Beutler Lab

Gene Symbol

Or6n1

Ensembl Gene

ENSMUSG00000049528

Gene Name

olfactory receptor family 6 subfamily N member 1

Synonyms

Olfr429, GA_x6K02T2P20D-21090094-21089156, MOR105-1

MMRRC Submission

043096-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.107) question?

Stock #

R5538 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

173916604-173917546 bp(+) (GRCm39)

Type of Mutation

makesense

DNA Base Change (assembly)

T to C at 173917544 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Stop codon to Arginine at position 313 (*313R)

Ref Sequence

ENSEMBL: ENSMUSP00000149257 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000060693] [ENSMUST00000216346]

AlphaFold

Q7TRW1

Predicted Effect

probably null
Transcript: ENSMUST00000060693
AA Change: *313R

SMART Domains

Protein: ENSMUSP00000051323
Gene: ENSMUSG00000049528
AA Change: *313R

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	308	1.2e-65	PFAM
Pfam:7tm_1	41	290	1.3e-23	PFAM

Predicted Effect

probably null
Transcript: ENSMUST00000193320
AA Change: *313R

SMART Domains

Protein: ENSMUSP00000142323
Gene: ENSMUSG00000049528
AA Change: *313R

Domain	Start	End	E-Value	Type
low complexity region	25	40	N/A	INTRINSIC
Pfam:7tm_1	41	290	8.9e-31	PFAM
Pfam:7tm_4	139	283	6.7e-43	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000201135

Predicted Effect

probably null
Transcript: ENSMUST00000216346
AA Change: *313R

Meta Mutation Damage Score

0.8480

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 98.3%
20x: 95.1%

Validation Efficiency

94% (73/78)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adgrv1	C	A	13: 81,581,808 (GRCm39)	R4745S	probably benign	Het
Ank3	A	G	10: 69,823,257 (GRCm39)	E642G	probably damaging	Het
Arhgap11a	G	T	2: 113,667,875 (GRCm39)	D375E	probably benign	Het
Arl8b	C	A	6: 108,760,297 (GRCm39)	L28M	probably damaging	Het
Bbs2	G	A	8: 94,816,391 (GRCm39)	T157M	probably damaging	Het
C2cd3	T	A	7: 100,104,700 (GRCm39)		probably null	Het
C6	T	A	15: 4,844,311 (GRCm39)	I911N	possibly damaging	Het
Cc2d2a	T	C	5: 43,852,518 (GRCm39)	I365T	possibly damaging	Het
Cd46	T	G	1: 194,750,478 (GRCm39)		probably null	Het
Ceacam3	A	T	7: 16,892,346 (GRCm39)	D363V	probably damaging	Het
Cep63	A	T	9: 102,465,992 (GRCm39)	L678*	probably null	Het
Clasrp	A	C	7: 19,318,707 (GRCm39)		probably benign	Het
Clk2	T	A	3: 89,082,962 (GRCm39)	Y412N	probably damaging	Het
Col24a1	C	T	3: 144,998,882 (GRCm39)	A5V	probably damaging	Het
Cox16	T	C	12: 81,531,703 (GRCm39)	N13D	possibly damaging	Het
Cybb	C	G	X: 9,316,989 (GRCm39)	D246H	probably benign	Het
Dhx32	A	T	7: 133,324,946 (GRCm39)	M437K	probably benign	Het
Dnm2	T	C	9: 21,416,923 (GRCm39)	F819L	probably benign	Het
Dpysl4	A	G	7: 138,671,906 (GRCm39)	T85A	probably benign	Het
Dspp	A	T	5: 104,323,096 (GRCm39)	K80*	probably null	Het
Dync2h1	T	C	9: 7,168,630 (GRCm39)		probably benign	Het
Ern1	A	G	11: 106,312,727 (GRCm39)	V218A	possibly damaging	Het
Fbn2	G	A	18: 58,204,973 (GRCm39)	R1157C	probably benign	Het
Fez1	T	A	9: 36,780,172 (GRCm39)	I323N	probably damaging	Het
Fmo9	T	A	1: 166,501,198 (GRCm39)	T199S	probably benign	Het
Fry	T	A	5: 150,419,313 (GRCm39)	L915Q	probably damaging	Het
Gatd1	A	G	7: 140,986,758 (GRCm39)		probably benign	Het
Gm10719	T	C	9: 3,018,962 (GRCm39)	L69S	probably benign	Het
Gnpda2	A	T	5: 69,735,394 (GRCm39)	H230Q	probably damaging	Het
Gramd1c	T	A	16: 43,802,455 (GRCm39)	N652I	probably damaging	Het
H2-T13	T	A	17: 36,392,178 (GRCm39)	H178L	probably benign	Het
Hells	T	A	19: 38,942,096 (GRCm39)	F462Y	probably benign	Het
Htr7	A	G	19: 35,947,235 (GRCm39)	F260L	probably benign	Het
Itsn1	C	A	16: 91,580,990 (GRCm39)	A23D	probably damaging	Het
Jak3	A	G	8: 72,131,417 (GRCm39)	D94G	probably benign	Het
Kctd16	T	A	18: 40,390,319 (GRCm39)	Y97*	probably null	Het
Kif20b	A	T	19: 34,930,364 (GRCm39)	K25*	probably null	Het
Klf2	T	C	8: 73,073,316 (GRCm39)	L40P	probably damaging	Het
Kmt2a	A	G	9: 44,731,639 (GRCm39)		probably benign	Het
Kmt2d	G	A	15: 98,749,990 (GRCm39)		probably benign	Het
Lonrf1	T	A	8: 36,690,178 (GRCm39)		probably null	Het
Lrp1b	A	T	2: 40,587,486 (GRCm39)	I154K	unknown	Het
Mybpc1	T	A	10: 88,381,891 (GRCm39)	I600L	possibly damaging	Het
Npnt	T	C	3: 132,610,724 (GRCm39)	N285S	probably damaging	Het
Or4c12b	T	A	2: 89,646,964 (GRCm39)	F92Y	probably damaging	Het
Or51h5	A	G	7: 102,577,728 (GRCm39)	T298A	probably damaging	Het
Or6c69	T	A	10: 129,747,871 (GRCm39)	Y92F	probably benign	Het
Pcnx1	T	C	12: 81,907,183 (GRCm39)	V13A	probably damaging	Het
Phkb	G	A	8: 86,648,756 (GRCm39)	V191I	possibly damaging	Het
Pnpla6	A	G	8: 3,581,508 (GRCm39)	M594V	probably benign	Het
Potefam3e	A	C	8: 19,799,430 (GRCm39)		probably null	Het
Prkdc	A	G	16: 15,469,333 (GRCm39)	E146G	probably damaging	Het
Ror1	T	C	4: 100,298,208 (GRCm39)	M527T	probably benign	Het
Scnm1	A	G	3: 95,037,066 (GRCm39)		probably benign	Het
Skint11	A	T	4: 114,088,959 (GRCm39)	N251I	probably damaging	Het
Slc19a3	T	A	1: 83,000,282 (GRCm39)	N245I	possibly damaging	Het
Slc1a3	A	T	15: 8,675,188 (GRCm39)	D272E	probably damaging	Het
Smok2b	T	A	17: 13,454,440 (GRCm39)	V200D	possibly damaging	Het
Sspo	T	C	6: 48,429,112 (GRCm39)	Y417H	probably damaging	Het
Stk11ip	C	A	1: 75,504,979 (GRCm39)	S388R	probably damaging	Het
Svep1	T	C	4: 58,049,282 (GRCm39)		probably null	Het
Sytl2	A	G	7: 90,038,114 (GRCm39)	I525V	probably benign	Het
Tie1	T	C	4: 118,343,390 (GRCm39)	N158D	probably benign	Het
Tle2	T	C	10: 81,416,418 (GRCm39)	L180P	probably damaging	Het
Txlnb	T	C	10: 17,714,657 (GRCm39)	L363P	probably damaging	Het
Upk3b	C	G	5: 136,072,890 (GRCm39)	A258G	probably benign	Het
Usp32	A	T	11: 84,908,612 (GRCm39)	D1031E	possibly damaging	Het
Vmn2r116	C	T	17: 23,620,041 (GRCm39)	L592F	probably benign	Het
Zfp607b	A	G	7: 27,402,294 (GRCm39)	H250R	probably damaging	Het

Other mutations in Or6n1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01626:Or6n1	APN	1	173,917,122 (GRCm39)	missense	probably damaging	1.00
IGL01868:Or6n1	APN	1	173,916,936 (GRCm39)	missense	possibly damaging	0.83
IGL01972:Or6n1	APN	1	173,916,987 (GRCm39)	missense	probably damaging	0.99
IGL02412:Or6n1	APN	1	173,916,809 (GRCm39)	missense	probably benign	0.00
IGL02628:Or6n1	APN	1	173,916,756 (GRCm39)	missense	probably benign
IGL02861:Or6n1	APN	1	173,916,602 (GRCm39)	utr 5 prime	probably benign
IGL03404:Or6n1	APN	1	173,917,464 (GRCm39)	missense	probably damaging	1.00
R0267:Or6n1	UTSW	1	173,916,732 (GRCm39)	missense	probably damaging	1.00
R0357:Or6n1	UTSW	1	173,916,675 (GRCm39)	missense	possibly damaging	0.71
R1499:Or6n1	UTSW	1	173,916,813 (GRCm39)	nonsense	probably null
R2051:Or6n1	UTSW	1	173,916,785 (GRCm39)	missense	possibly damaging	0.95
R4706:Or6n1	UTSW	1	173,917,268 (GRCm39)	missense	probably damaging	1.00
R4820:Or6n1	UTSW	1	173,916,742 (GRCm39)	missense	possibly damaging	0.95
R5439:Or6n1	UTSW	1	173,917,541 (GRCm39)	missense	probably benign	0.01
R5907:Or6n1	UTSW	1	173,916,785 (GRCm39)	missense	probably benign	0.08
R6932:Or6n1	UTSW	1	173,917,316 (GRCm39)	missense	probably damaging	0.96
R7808:Or6n1	UTSW	1	173,917,417 (GRCm39)	nonsense	probably null
R8040:Or6n1	UTSW	1	173,916,723 (GRCm39)	missense	possibly damaging	0.68
R8467:Or6n1	UTSW	1	173,917,007 (GRCm39)	missense	probably benign	0.00
R9124:Or6n1	UTSW	1	173,917,341 (GRCm39)	missense	probably damaging	1.00
R9797:Or6n1	UTSW	1	173,917,356 (GRCm39)	missense	possibly damaging	0.65

Predicted Primers

PCR Primer
(F):5'- CCTTTTCATGTATGTGCGACTGAAG -3'
(R):5'- GCCTCCTATGATGCTGAGAG -3'

Sequencing Primer
(F):5'- CGACTGAAGAAGAGTTACTCCCTTG -3'
(R):5'- GATCAAGCTGTATATGGCTCCAG -3'

Posted On

2017-08-08