Incidental Mutation 'R6105:Postn'
| ID |
485456 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Postn
|
| Ensembl Gene |
ENSMUSG00000027750 |
| Gene Name |
periostin, osteoblast specific factor |
| Synonyms |
A630052E07Rik, peri, Periostin, Osf2, OSF-2 |
| MMRRC Submission |
044255-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R6105 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
3 |
| Chromosomal Location |
54268530-54298458 bp(+) (GRCm39) |
| Type of Mutation |
splice site (4 bp from exon) |
| DNA Base Change (assembly) |
A to G
at 54279641 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000112735
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073012]
[ENSMUST00000081564]
[ENSMUST00000107985]
[ENSMUST00000117373]
|
| AlphaFold |
Q62009 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000073012
|
| SMART Domains |
Protein: ENSMUSP00000072773
Gene: ENSMUSG00000027750
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
FAS1
|
135 |
235 |
7.81e-30 |
SMART |
|
FAS1
|
272 |
370 |
2.31e-32 |
SMART |
|
FAS1
|
406 |
497 |
2.43e-17 |
SMART |
|
FAS1
|
534 |
633 |
2.5e-28 |
SMART |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000081564
|
| SMART Domains |
Protein: ENSMUSP00000080276
Gene: ENSMUSG00000027750
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
FAS1
|
135 |
235 |
7.81e-30 |
SMART |
|
FAS1
|
272 |
370 |
2.31e-32 |
SMART |
|
FAS1
|
406 |
497 |
2.43e-17 |
SMART |
|
FAS1
|
534 |
633 |
2.5e-28 |
SMART |
|
low complexity region
|
669 |
680 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000107985
|
| SMART Domains |
Protein: ENSMUSP00000103619
Gene: ENSMUSG00000027750
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
FAS1
|
135 |
235 |
7.81e-30 |
SMART |
|
FAS1
|
272 |
370 |
2.31e-32 |
SMART |
|
FAS1
|
406 |
497 |
2.43e-17 |
SMART |
|
FAS1
|
534 |
633 |
2.5e-28 |
SMART |
|
low complexity region
|
669 |
680 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000117373
|
| SMART Domains |
Protein: ENSMUSP00000112735
Gene: ENSMUSG00000027750
| Domain | Start | End | E-Value | Type |
|---|
|
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
|
FAS1
|
135 |
235 |
7.81e-30 |
SMART |
|
FAS1
|
272 |
370 |
2.31e-32 |
SMART |
|
FAS1
|
406 |
497 |
2.43e-17 |
SMART |
|
FAS1
|
534 |
633 |
2.5e-28 |
SMART |
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.6%
- 10x: 97.9%
- 20x: 94.0%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: This gene encodes a secreted extracellular matrix protein that functions in tissue development and regeneration, including wound healing and ventricular remodeling following myocardial infarction. The encoded protein binds to integrins to support adhesion and migration of epithelial cells. This protein plays a role in cancer stem cell maintenance and metastasis. Mice lacking this gene exhibit cardiac valve disease, and skeletal and dental defects. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2015]
PHENOTYPE: Homozygous null mice display abnormalities of the enamel, periodontal ligament, ameloblasts, and incisors. For one allele changing the hardness of the food alters the severity of the abnormalities. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 38 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca13 |
T |
C |
11: 9,347,812 (GRCm39) |
M3555T |
probably damaging |
Het |
| Adam9 |
A |
T |
8: 25,460,775 (GRCm39) |
C570S |
probably damaging |
Het |
| Adh6b |
T |
A |
3: 138,063,471 (GRCm39) |
I350K |
possibly damaging |
Het |
| Ahnak |
G |
A |
19: 8,981,463 (GRCm39) |
V916I |
probably benign |
Het |
| Aldh4a1 |
C |
T |
4: 139,365,806 (GRCm39) |
P266S |
possibly damaging |
Het |
| Cnot7 |
C |
T |
8: 40,963,078 (GRCm39) |
R32Q |
probably benign |
Het |
| Cyb5a |
G |
A |
18: 84,889,718 (GRCm39) |
R49Q |
possibly damaging |
Het |
| Fbxo6 |
A |
T |
4: 148,233,979 (GRCm39) |
I39N |
probably damaging |
Het |
| Glul |
T |
A |
1: 153,782,177 (GRCm39) |
Y137* |
probably null |
Het |
| Ipo8 |
A |
G |
6: 148,700,168 (GRCm39) |
Y570H |
probably damaging |
Het |
| Kif2b |
A |
G |
11: 91,466,814 (GRCm39) |
S490P |
probably benign |
Het |
| Kxd1 |
A |
T |
8: 70,972,589 (GRCm39) |
N33K |
probably benign |
Het |
| Man2a2 |
T |
C |
7: 80,016,749 (GRCm39) |
D355G |
probably damaging |
Het |
| Map6 |
T |
C |
7: 98,917,314 (GRCm39) |
V29A |
probably damaging |
Het |
| Mtmr3 |
T |
C |
11: 4,435,432 (GRCm39) |
D1116G |
probably damaging |
Het |
| Or4p23 |
T |
A |
2: 88,577,184 (GRCm39) |
H16L |
probably benign |
Het |
| Or8b52 |
A |
G |
9: 38,576,916 (GRCm39) |
S75P |
probably damaging |
Het |
| Or8d2b |
T |
C |
9: 38,788,604 (GRCm39) |
L44P |
possibly damaging |
Het |
| Pak1ip1 |
T |
A |
13: 41,158,361 (GRCm39) |
L78Q |
probably damaging |
Het |
| Phf10 |
C |
T |
17: 15,174,387 (GRCm39) |
|
probably null |
Het |
| Pikfyve |
A |
G |
1: 65,303,504 (GRCm39) |
|
probably null |
Het |
| Pkd1l3 |
A |
G |
8: 110,367,478 (GRCm39) |
D1225G |
probably damaging |
Het |
| Slc22a30 |
T |
C |
19: 8,315,232 (GRCm39) |
|
probably null |
Het |
| Specc1l |
T |
C |
10: 75,084,466 (GRCm39) |
S730P |
probably damaging |
Het |
| Steap2 |
T |
A |
5: 5,725,891 (GRCm39) |
I378F |
possibly damaging |
Het |
| Sult4a1 |
T |
A |
15: 83,970,821 (GRCm39) |
K195* |
probably null |
Het |
| Tgfb1i1 |
T |
A |
7: 127,847,589 (GRCm39) |
|
probably null |
Het |
| Thbs4 |
G |
T |
13: 92,911,993 (GRCm39) |
Q246K |
possibly damaging |
Het |
| Tnfsf10 |
A |
G |
3: 27,389,698 (GRCm39) |
Y253C |
probably damaging |
Het |
| Tnpo3 |
G |
T |
6: 29,588,042 (GRCm39) |
C125* |
probably null |
Het |
| Trappc8 |
A |
G |
18: 20,979,504 (GRCm39) |
|
probably null |
Het |
| Trpm6 |
C |
T |
19: 18,831,112 (GRCm39) |
R1326* |
probably null |
Het |
| Vmn2r19 |
A |
C |
6: 123,293,054 (GRCm39) |
E365D |
possibly damaging |
Het |
| Vps18 |
A |
G |
2: 119,119,543 (GRCm39) |
Y8C |
probably damaging |
Het |
| Zc3hav1l |
A |
G |
6: 38,270,012 (GRCm39) |
V279A |
probably benign |
Het |
| Zfp111 |
T |
C |
7: 23,902,791 (GRCm39) |
|
probably null |
Het |
| Zfp618 |
A |
T |
4: 63,051,478 (GRCm39) |
Q753L |
probably benign |
Het |
| Zkscan17 |
A |
T |
11: 59,394,401 (GRCm39) |
C67S |
probably damaging |
Het |
|
| Other mutations in Postn |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00433:Postn
|
APN |
3 |
54,281,149 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL00567:Postn
|
APN |
3 |
54,291,944 (GRCm39) |
missense |
probably benign |
|
|
IGL00742:Postn
|
APN |
3 |
54,280,315 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
IGL00971:Postn
|
APN |
3 |
54,276,697 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
IGL01105:Postn
|
APN |
3 |
54,270,131 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01460:Postn
|
APN |
3 |
54,282,579 (GRCm39) |
unclassified |
probably benign |
|
|
IGL01609:Postn
|
APN |
3 |
54,276,649 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01878:Postn
|
APN |
3 |
54,290,901 (GRCm39) |
splice site |
probably null |
|
|
IGL01885:Postn
|
APN |
3 |
54,283,455 (GRCm39) |
unclassified |
probably benign |
|
|
IGL02040:Postn
|
APN |
3 |
54,270,110 (GRCm39) |
missense |
probably benign |
|
|
IGL02431:Postn
|
APN |
3 |
54,282,517 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02578:Postn
|
APN |
3 |
54,284,625 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
IGL02943:Postn
|
APN |
3 |
54,285,029 (GRCm39) |
critical splice donor site |
probably null |
|
|
IGL03307:Postn
|
APN |
3 |
54,282,548 (GRCm39) |
missense |
probably benign |
0.32 |
|
sticklike
|
UTSW |
3 |
54,279,527 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0117:Postn
|
UTSW |
3 |
54,290,902 (GRCm39) |
splice site |
probably benign |
|
|
R0270:Postn
|
UTSW |
3 |
54,291,971 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0410:Postn
|
UTSW |
3 |
54,292,698 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R0548:Postn
|
UTSW |
3 |
54,274,997 (GRCm39) |
nonsense |
probably null |
|
|
R0734:Postn
|
UTSW |
3 |
54,270,136 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1648:Postn
|
UTSW |
3 |
54,283,522 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1796:Postn
|
UTSW |
3 |
54,281,177 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1823:Postn
|
UTSW |
3 |
54,292,708 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1938:Postn
|
UTSW |
3 |
54,285,033 (GRCm39) |
splice site |
probably null |
|
|
R2311:Postn
|
UTSW |
3 |
54,292,644 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R2566:Postn
|
UTSW |
3 |
54,284,374 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2938:Postn
|
UTSW |
3 |
54,277,731 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4105:Postn
|
UTSW |
3 |
54,283,462 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4394:Postn
|
UTSW |
3 |
54,278,376 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4620:Postn
|
UTSW |
3 |
54,284,414 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4628:Postn
|
UTSW |
3 |
54,279,578 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4697:Postn
|
UTSW |
3 |
54,282,492 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4709:Postn
|
UTSW |
3 |
54,292,031 (GRCm39) |
intron |
probably benign |
|
|
R4952:Postn
|
UTSW |
3 |
54,297,736 (GRCm39) |
utr 3 prime |
probably benign |
|
|
R5303:Postn
|
UTSW |
3 |
54,285,018 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5704:Postn
|
UTSW |
3 |
54,279,527 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5902:Postn
|
UTSW |
3 |
54,279,510 (GRCm39) |
missense |
probably benign |
0.03 |
|
R5914:Postn
|
UTSW |
3 |
54,281,221 (GRCm39) |
nonsense |
probably null |
|
|
R6032:Postn
|
UTSW |
3 |
54,284,137 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R6032:Postn
|
UTSW |
3 |
54,284,137 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R6101:Postn
|
UTSW |
3 |
54,279,641 (GRCm39) |
splice site |
probably null |
|
|
R6334:Postn
|
UTSW |
3 |
54,292,703 (GRCm39) |
missense |
probably benign |
|
|
R7131:Postn
|
UTSW |
3 |
54,270,056 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7322:Postn
|
UTSW |
3 |
54,277,701 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7430:Postn
|
UTSW |
3 |
54,277,623 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7497:Postn
|
UTSW |
3 |
54,270,091 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8245:Postn
|
UTSW |
3 |
54,283,468 (GRCm39) |
missense |
probably null |
0.99 |
|
R8350:Postn
|
UTSW |
3 |
54,277,679 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8748:Postn
|
UTSW |
3 |
54,296,760 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R9221:Postn
|
UTSW |
3 |
54,282,515 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
R9301:Postn
|
UTSW |
3 |
54,292,659 (GRCm39) |
missense |
probably benign |
0.26 |
|
R9313:Postn
|
UTSW |
3 |
54,273,336 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9657:Postn
|
UTSW |
3 |
54,290,820 (GRCm39) |
missense |
probably benign |
0.04 |
|
RF018:Postn
|
UTSW |
3 |
54,291,913 (GRCm39) |
missense |
probably damaging |
0.96 |
|
X0004:Postn
|
UTSW |
3 |
54,270,115 (GRCm39) |
missense |
probably damaging |
1.00 |
|
X0022:Postn
|
UTSW |
3 |
54,278,261 (GRCm39) |
missense |
probably benign |
0.03 |
|
Z1088:Postn
|
UTSW |
3 |
54,282,548 (GRCm39) |
missense |
probably benign |
0.32 |
|
| Predicted Primers |
PCR Primer
(F):5'- TCCCCAGCTCTCATGAAGTACC -3'
(R):5'- TACTAGATGCTGGGCCAAGG -3'
Sequencing Primer
(F):5'- TAAATACCCTCCAGTGCTCTGAGG -3'
(R):5'- AAGGTCCTGCATGGGCTG -3'
|
| Posted On |
2017-08-16 |
Incidental Mutation