Incidental Mutation 'R6132:Vmn2r106'
ID 487205
Institutional Source Beutler Lab
Gene Symbol Vmn2r106
Ensembl Gene ENSMUSG00000091656
Gene Name vomeronasal 2, receptor 106
Synonyms EG224576
MMRRC Submission 044279-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.166) question?
Stock # R6132 (G1)
Quality Score 225.009
Status Validated
Chromosome 17
Chromosomal Location 20487809-20505692 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 20488666 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 578 (T578A)
Ref Sequence ENSEMBL: ENSMUSP00000126534 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000167464]
AlphaFold E9PY92
Predicted Effect probably benign
Transcript: ENSMUST00000167464
AA Change: T578A

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000126534
Gene: ENSMUSG00000091656
AA Change: T578A

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
Pfam:ANF_receptor 83 471 3.8e-37 PFAM
Pfam:NCD3G 514 567 5.7e-22 PFAM
Pfam:7tm_3 596 835 1.3e-49 PFAM
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.2%
  • 20x: 94.9%
Validation Efficiency 96% (49/51)
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca15 T C 7: 119,960,643 (GRCm39) Y702H probably benign Het
Adgrv1 G T 13: 81,654,195 (GRCm39) N2225K probably benign Het
Afg3l2 G T 18: 67,554,329 (GRCm39) L458M probably damaging Het
Alkbh5 G T 11: 60,428,821 (GRCm39) probably benign Het
Atp5mc1 A G 11: 95,965,850 (GRCm39) M1T probably null Het
Crebrf C T 17: 26,982,377 (GRCm39) P588S probably benign Het
Ctsr A C 13: 61,309,582 (GRCm39) probably null Het
Cyp2c68 A G 19: 39,691,858 (GRCm39) V355A possibly damaging Het
Ddx52 A G 11: 83,850,283 (GRCm39) K555E possibly damaging Het
Depdc5 T A 5: 33,067,811 (GRCm39) S410T probably damaging Het
Dhx30 A T 9: 109,914,847 (GRCm39) I884N probably damaging Het
Dlg1 A T 16: 31,655,059 (GRCm39) N518I possibly damaging Het
Dnah12 T A 14: 26,439,066 (GRCm39) I506N probably damaging Het
Efcab6 A G 15: 83,917,173 (GRCm39) L129P probably damaging Het
Erap1 A G 13: 74,808,401 (GRCm39) N38D probably benign Het
Esf1 A G 2: 140,001,699 (GRCm39) F383L probably benign Het
Exoc4 A G 6: 33,735,033 (GRCm39) E550G probably damaging Het
Fbxo44 G A 4: 148,240,565 (GRCm39) T221I probably benign Het
Gal3st2b A T 1: 93,867,688 (GRCm39) M112L possibly damaging Het
Golph3l C G 3: 95,499,145 (GRCm39) P96A probably benign Het
Gprc6a T A 10: 51,491,356 (GRCm39) I727F possibly damaging Het
Grin3b T C 10: 79,812,274 (GRCm39) L479P probably damaging Het
Kdm5a C T 6: 120,351,892 (GRCm39) H161Y probably damaging Het
Lman2 A G 13: 55,510,038 (GRCm39) S73P probably benign Het
Map3k19 T C 1: 127,778,213 (GRCm39) N4S possibly damaging Het
Mkln1 G A 6: 31,408,155 (GRCm39) V161M probably damaging Het
Mmel1 C T 4: 154,979,475 (GRCm39) H728Y probably damaging Het
Nova2 G A 7: 18,691,794 (GRCm39) A244T unknown Het
Nrcam T A 12: 44,617,007 (GRCm39) Y668N probably damaging Het
Oacyl G T 18: 65,859,426 (GRCm39) G255W probably damaging Het
Omd A C 13: 49,743,843 (GRCm39) I298L probably damaging Het
Or5ac19 A G 16: 59,089,367 (GRCm39) V221A probably damaging Het
Or5ak24 A T 2: 85,260,490 (GRCm39) S228T probably benign Het
Or8b36 ATTGCTGTTT ATTGCTGTTTGCTGTTT 9: 37,937,836 (GRCm39) probably null Het
Otor A T 2: 142,920,520 (GRCm39) D34V probably damaging Het
Otx1 A T 11: 21,949,406 (GRCm39) L24H probably damaging Het
Pwwp2a A G 11: 43,596,455 (GRCm39) Y540C probably damaging Het
Rttn T A 18: 89,133,770 (GRCm39) probably null Het
S1pr4 G A 10: 81,335,030 (GRCm39) A148V probably benign Het
Scn10a C T 9: 119,442,761 (GRCm39) V1495M possibly damaging Het
Sel1l3 T C 5: 53,357,531 (GRCm39) K154E possibly damaging Het
Sema3a T G 5: 13,573,142 (GRCm39) probably null Het
Slf2 T A 19: 44,949,300 (GRCm39) N870K possibly damaging Het
Spmip6 C T 4: 41,517,160 (GRCm39) M1I probably null Het
Syne2 T C 12: 75,991,921 (GRCm39) V1962A probably benign Het
Tarbp1 T A 8: 127,161,548 (GRCm39) I1219F probably benign Het
Tet1 A C 10: 62,649,079 (GRCm39) C173W probably damaging Het
Tnn A G 1: 159,973,641 (GRCm39) F242S probably damaging Het
Tollip A G 7: 141,443,334 (GRCm39) S174P probably benign Het
Tsr3 G T 17: 25,460,835 (GRCm39) D234Y probably null Het
Zfp457 G T 13: 67,441,360 (GRCm39) S309* probably null Het
Other mutations in Vmn2r106
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00979:Vmn2r106 APN 17 20,497,837 (GRCm39) missense possibly damaging 0.90
IGL01313:Vmn2r106 APN 17 20,498,651 (GRCm39) missense probably damaging 0.99
IGL01419:Vmn2r106 APN 17 20,499,807 (GRCm39) missense probably benign 0.06
IGL01574:Vmn2r106 APN 17 20,488,572 (GRCm39) missense possibly damaging 0.94
IGL01796:Vmn2r106 APN 17 20,488,314 (GRCm39) missense possibly damaging 0.79
IGL01893:Vmn2r106 APN 17 20,497,730 (GRCm39) missense probably benign 0.06
IGL01895:Vmn2r106 APN 17 20,499,227 (GRCm39) missense probably benign 0.02
IGL02378:Vmn2r106 APN 17 20,497,791 (GRCm39) missense probably damaging 1.00
IGL02430:Vmn2r106 APN 17 20,499,158 (GRCm39) missense probably benign 0.38
IGL02664:Vmn2r106 APN 17 20,488,344 (GRCm39) missense possibly damaging 0.88
IGL03308:Vmn2r106 APN 17 20,498,785 (GRCm39) nonsense probably null
IGL03384:Vmn2r106 APN 17 20,488,405 (GRCm39) missense probably damaging 0.99
R0401:Vmn2r106 UTSW 17 20,499,281 (GRCm39) missense possibly damaging 0.86
R0842:Vmn2r106 UTSW 17 20,488,465 (GRCm39) missense probably damaging 1.00
R0964:Vmn2r106 UTSW 17 20,487,859 (GRCm39) missense probably benign 0.00
R1235:Vmn2r106 UTSW 17 20,499,741 (GRCm39) missense probably benign 0.00
R1709:Vmn2r106 UTSW 17 20,499,373 (GRCm39) missense probably benign 0.12
R1712:Vmn2r106 UTSW 17 20,498,997 (GRCm39) missense probably benign 0.01
R1770:Vmn2r106 UTSW 17 20,488,560 (GRCm39) missense probably damaging 0.99
R2049:Vmn2r106 UTSW 17 20,488,566 (GRCm39) missense possibly damaging 0.90
R2245:Vmn2r106 UTSW 17 20,488,423 (GRCm39) missense probably benign 0.13
R2336:Vmn2r106 UTSW 17 20,488,470 (GRCm39) missense probably benign 0.18
R2910:Vmn2r106 UTSW 17 20,498,946 (GRCm39) missense probably damaging 1.00
R3025:Vmn2r106 UTSW 17 20,499,147 (GRCm39) missense probably benign 0.00
R3944:Vmn2r106 UTSW 17 20,487,913 (GRCm39) missense probably damaging 1.00
R4081:Vmn2r106 UTSW 17 20,487,818 (GRCm39) nonsense probably null
R4153:Vmn2r106 UTSW 17 20,488,080 (GRCm39) missense probably damaging 1.00
R4356:Vmn2r106 UTSW 17 20,499,910 (GRCm39) missense probably benign 0.06
R4426:Vmn2r106 UTSW 17 20,505,641 (GRCm39) missense probably benign 0.00
R4590:Vmn2r106 UTSW 17 20,497,728 (GRCm39) missense probably damaging 0.99
R4661:Vmn2r106 UTSW 17 20,487,885 (GRCm39) missense probably benign 0.10
R5106:Vmn2r106 UTSW 17 20,499,395 (GRCm39) critical splice acceptor site probably null
R5341:Vmn2r106 UTSW 17 20,497,788 (GRCm39) missense probably benign 0.00
R5509:Vmn2r106 UTSW 17 20,498,684 (GRCm39) missense probably damaging 0.99
R5826:Vmn2r106 UTSW 17 20,499,133 (GRCm39) missense probably benign
R5859:Vmn2r106 UTSW 17 20,505,583 (GRCm39) missense possibly damaging 0.72
R5937:Vmn2r106 UTSW 17 20,505,667 (GRCm39) nonsense probably null
R5972:Vmn2r106 UTSW 17 20,498,738 (GRCm39) missense probably benign
R6056:Vmn2r106 UTSW 17 20,487,806 (GRCm39) splice site probably null
R6108:Vmn2r106 UTSW 17 20,488,638 (GRCm39) missense probably benign 0.11
R6114:Vmn2r106 UTSW 17 20,488,638 (GRCm39) missense probably benign 0.11
R6115:Vmn2r106 UTSW 17 20,488,638 (GRCm39) missense probably benign 0.11
R6208:Vmn2r106 UTSW 17 20,488,591 (GRCm39) missense probably damaging 0.99
R6217:Vmn2r106 UTSW 17 20,488,501 (GRCm39) missense probably benign 0.10
R6289:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6378:Vmn2r106 UTSW 17 20,498,667 (GRCm39) missense probably benign 0.19
R6390:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6391:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6392:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6405:Vmn2r106 UTSW 17 20,499,361 (GRCm39) missense probably benign 0.22
R6427:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6428:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6435:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6436:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6437:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6511:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6512:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6587:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6703:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6730:Vmn2r106 UTSW 17 20,499,096 (GRCm39) missense possibly damaging 0.64
R6961:Vmn2r106 UTSW 17 20,488,646 (GRCm39) nonsense probably null
R7054:Vmn2r106 UTSW 17 20,499,182 (GRCm39) missense probably damaging 0.96
R7379:Vmn2r106 UTSW 17 20,488,037 (GRCm39) missense possibly damaging 0.75
R7402:Vmn2r106 UTSW 17 20,487,883 (GRCm39) missense probably damaging 0.99
R7497:Vmn2r106 UTSW 17 20,488,201 (GRCm39) missense probably damaging 1.00
R7692:Vmn2r106 UTSW 17 20,505,490 (GRCm39) missense possibly damaging 0.96
R8539:Vmn2r106 UTSW 17 20,499,271 (GRCm39) missense probably benign 0.00
R8827:Vmn2r106 UTSW 17 20,487,868 (GRCm39) missense probably benign 0.05
R8872:Vmn2r106 UTSW 17 20,488,401 (GRCm39) missense probably benign 0.19
R9118:Vmn2r106 UTSW 17 20,505,667 (GRCm39) missense probably benign 0.00
R9254:Vmn2r106 UTSW 17 20,496,066 (GRCm39) missense probably damaging 1.00
R9379:Vmn2r106 UTSW 17 20,496,066 (GRCm39) missense probably damaging 1.00
R9571:Vmn2r106 UTSW 17 20,505,641 (GRCm39) missense probably benign 0.17
Predicted Primers PCR Primer
(F):5'- CAACTCCAAATGTGGTCTGTTG -3'
(R):5'- GGTGAATTTGTGACAGTCCTTGTAC -3'

Sequencing Primer
(F):5'- TTGACCAATGAAGTTCAAAGAGC -3'
(R):5'- GACAGTCCTTGTACATAGAAATGAC -3'
Posted On 2017-10-10