Mutagenetix > Incidental Mutation

Incidental Mutation 'R6126:Spata31e3'

487413

Institutional Source

Beutler Lab

Gene Symbol

Spata31e3

Ensembl Gene

ENSMUSG00000095300

Gene Name

spermatogenesis associated 31 subfamily E member 3

Synonyms

LOC380882, Gm906

MMRRC Submission

044273-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.071) question?

Stock #

R6126 (G1)

Quality Score

213.009

Status

Not validated

Chromosome

Chromosomal Location

50399217-50404344 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 50400326 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Lysine at position 667 (Q667K)

Ref Sequence

ENSEMBL: ENSMUSP00000097121 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000099521]

AlphaFold

Q3V0M1

Predicted Effect

probably benign
Transcript: ENSMUST00000099521
AA Change: Q667K

PolyPhen 2 Score 0.177 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000097121
Gene: ENSMUSG00000095300
AA Change: Q667K

Domain	Start	End	E-Value	Type
low complexity region	69	82	N/A	INTRINSIC
Pfam:FAM75	96	414	5.3e-15	PFAM
SCOP:d1i5pa1	811	874	1e-2	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000221451

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 98.5%
20x: 95.8%

Validation Efficiency

93% (51/55)

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4933434E20Rik	G	A	3: 89,963,881 (GRCm39)	R111H	probably damaging	Het
Alk	G	A	17: 72,182,037 (GRCm39)	L1329F	possibly damaging	Het
Apoh	A	T	11: 108,288,199 (GRCm39)	I106F	probably damaging	Het
Atp8a2	C	T	14: 60,281,775 (GRCm39)	M126I	probably benign	Het
Cactin	G	A	10: 81,160,143 (GRCm39)	R412H	possibly damaging	Het
Chd7	T	C	4: 8,826,482 (GRCm39)	S949P	probably damaging	Het
Clec11a	C	T	7: 43,954,345 (GRCm39)	A203T	probably damaging	Het
Dnase1l1	C	T	X: 73,320,644 (GRCm39)		probably null	Het
Dst	T	A	1: 34,267,264 (GRCm39)	I5080K	probably damaging	Het
Ecd	T	C	14: 20,388,493 (GRCm39)		probably null	Het
Eml2	G	A	7: 18,935,088 (GRCm39)	V432I	probably damaging	Het
Fan1	T	A	7: 64,014,318 (GRCm39)	K638*	probably null	Het
Fblim1	G	A	4: 141,312,033 (GRCm39)	R231C	probably damaging	Het
Fig4	A	G	10: 41,141,443 (GRCm39)	I272T	probably damaging	Het
Foxd2	C	A	4: 114,765,702 (GRCm39)	G106V	unknown	Het
Ggcx	A	T	6: 72,394,966 (GRCm39)	M115L	possibly damaging	Het
Gm21976	G	A	13: 98,423,821 (GRCm39)	R72H	unknown	Het
Hsf2	T	C	10: 57,372,013 (GRCm39)	V38A	probably damaging	Het
Ifi208	A	G	1: 173,505,274 (GRCm39)	Y8C	possibly damaging	Het
Il31ra	A	C	13: 112,666,908 (GRCm39)	L390R	probably damaging	Het
Kif1a	A	T	1: 92,947,621 (GRCm39)	Y1614N	probably damaging	Het
Mef2b	C	A	8: 70,619,526 (GRCm39)	T267K	probably benign	Het
Mfsd8	A	G	3: 40,786,446 (GRCm39)		probably null	Het
Mnx1	G	T	5: 29,683,110 (GRCm39)	A55E	possibly damaging	Het
Muc5ac	A	T	7: 141,354,969 (GRCm39)	I949F	possibly damaging	Het
Muc6	G	T	7: 141,218,685 (GRCm39)	T1996N	possibly damaging	Het
Ntpcr	G	A	8: 126,462,626 (GRCm39)		probably null	Het
Or12j3	T	G	7: 139,953,166 (GRCm39)	Y119S	probably damaging	Het
Otx1	T	C	11: 21,946,457 (GRCm39)		probably benign	Het
Panx1	T	A	9: 14,919,086 (GRCm39)	I258F	probably benign	Het
Pask	T	C	1: 93,242,081 (GRCm39)	Y1212C	probably damaging	Het
Pdgfra	A	G	5: 75,331,190 (GRCm39)	K265R	probably benign	Het
Phf20l1	A	G	15: 66,508,673 (GRCm39)	H844R	probably benign	Het
Ppp6r1	T	C	7: 4,646,376 (GRCm39)	T136A	possibly damaging	Het
Rab35	A	G	5: 115,783,767 (GRCm39)	N185D	probably benign	Het
Rdh1	A	T	10: 127,599,083 (GRCm39)	D188V	probably damaging	Het
Rimbp3	A	T	16: 17,030,140 (GRCm39)	D1188V	probably benign	Het
Robo2	C	T	16: 73,717,570 (GRCm39)	G100S	probably benign	Het
Rsf1	ATGGCG	ATGGCGACGGTGGCG	7: 97,229,111 (GRCm39)		probably benign	Het
Ryr1	A	C	7: 28,775,664 (GRCm39)	D2282E	probably null	Het
Ryr3	A	G	2: 112,588,015 (GRCm39)	L2642P	probably damaging	Het
Sez6	A	T	11: 77,864,630 (GRCm39)	Y530F	probably damaging	Het
Slc12a2	A	G	18: 58,077,116 (GRCm39)	Y1205C	possibly damaging	Het
Slc4a5	A	T	6: 83,203,247 (GRCm39)	H49L	probably benign	Het
Smchd1	A	T	17: 71,677,280 (GRCm39)	V1503D	probably damaging	Het
Srsf11	C	T	3: 157,728,981 (GRCm39)		probably benign	Het
Tex15	A	G	8: 34,063,591 (GRCm39)	N1007S	probably benign	Het
Tpk1	A	T	6: 43,400,594 (GRCm39)	C143S	probably damaging	Het
Wdr20	A	T	12: 110,760,536 (GRCm39)	H474L	probably benign	Het
Wnk4	A	G	11: 101,167,174 (GRCm39)		probably benign	Het
Zfp292	T	C	4: 34,808,497 (GRCm39)	T1516A	probably benign	Het
Zfp462	G	A	4: 55,023,573 (GRCm39)	A2121T	probably benign	Het
Zfp647	G	A	15: 76,796,285 (GRCm39)	P125L	probably damaging	Het

Other mutations in Spata31e3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00575:Spata31e3	APN	13	50,400,752 (GRCm39)	missense	probably damaging	1.00
IGL02008:Spata31e3	APN	13	50,400,721 (GRCm39)	missense	probably benign	0.00
R0464:Spata31e3	UTSW	13	50,402,311 (GRCm39)	splice site	probably benign
R0481:Spata31e3	UTSW	13	50,401,000 (GRCm39)	missense	probably benign	0.33
R0781:Spata31e3	UTSW	13	50,402,296 (GRCm39)	missense	possibly damaging	0.70
R1110:Spata31e3	UTSW	13	50,402,296 (GRCm39)	missense	possibly damaging	0.70
R1945:Spata31e3	UTSW	13	50,399,527 (GRCm39)	missense	probably damaging	1.00
R3119:Spata31e3	UTSW	13	50,401,005 (GRCm39)	nonsense	probably null
R3824:Spata31e3	UTSW	13	50,399,548 (GRCm39)	missense	possibly damaging	0.73
R3861:Spata31e3	UTSW	13	50,400,887 (GRCm39)	missense	probably benign	0.00
R4256:Spata31e3	UTSW	13	50,404,141 (GRCm39)	missense	probably benign	0.18
R4607:Spata31e3	UTSW	13	50,399,542 (GRCm39)	missense	possibly damaging	0.86
R6550:Spata31e3	UTSW	13	50,399,482 (GRCm39)	missense	probably benign	0.00
R6913:Spata31e3	UTSW	13	50,399,293 (GRCm39)	missense	probably damaging	0.99
R6970:Spata31e3	UTSW	13	50,401,007 (GRCm39)	missense	possibly damaging	0.86
R7339:Spata31e3	UTSW	13	50,401,204 (GRCm39)	missense	possibly damaging	0.86
R7347:Spata31e3	UTSW	13	50,399,780 (GRCm39)	missense	probably benign	0.01
R7607:Spata31e3	UTSW	13	50,404,296 (GRCm39)	missense	possibly damaging	0.72
R7655:Spata31e3	UTSW	13	50,401,122 (GRCm39)	missense	probably benign	0.00
R7656:Spata31e3	UTSW	13	50,401,122 (GRCm39)	missense	probably benign	0.00
R7711:Spata31e3	UTSW	13	50,401,131 (GRCm39)	missense	probably benign	0.43
R7803:Spata31e3	UTSW	13	50,400,226 (GRCm39)	missense	probably benign	0.33
R8382:Spata31e3	UTSW	13	50,401,474 (GRCm39)	missense	possibly damaging	0.71
R8510:Spata31e3	UTSW	13	50,404,228 (GRCm39)	missense	probably benign	0.04
R9006:Spata31e3	UTSW	13	50,401,589 (GRCm39)	missense	possibly damaging	0.52
R9013:Spata31e3	UTSW	13	50,401,588 (GRCm39)	missense	possibly damaging	0.71
R9172:Spata31e3	UTSW	13	50,401,417 (GRCm39)	missense	probably benign	0.03
R9452:Spata31e3	UTSW	13	50,400,808 (GRCm39)	missense	possibly damaging	0.84
R9721:Spata31e3	UTSW	13	50,400,688 (GRCm39)	missense	possibly damaging	0.96

Predicted Primers

PCR Primer
(F):5'- AGGACATCGCATAAGCCCTG -3'
(R):5'- TATGACAATGGAAGGCCCTGG -3'

Sequencing Primer
(F):5'- CATCGCATAAGCCCTGGGAAG -3'
(R):5'- GTCCTACCTTCAGGAGCCAAAC -3'

Posted On

2017-10-10