Mutagenetix > Incidental Mutation

Incidental Mutation 'R6178:Zfp65'

487892

Institutional Source

Beutler Lab

Gene Symbol

Zfp65

Ensembl Gene

ENSMUSG00000071281

Gene Name

zinc finger protein 65

Synonyms

KRAB5, Zfp71-rs1

MMRRC Submission

044320-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.103) question?

Stock #

R6178 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

67853428-67877238 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 67858437 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Proline to Serine at position 76 (P76S)

Ref Sequence

ENSEMBL: ENSMUSP00000153058 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000073157] [ENSMUST00000127979] [ENSMUST00000130891] [ENSMUST00000223829]

AlphaFold

Q91W94

Predicted Effect

probably benign
Transcript: ENSMUST00000073157
AA Change: P76S

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000072900
Gene: ENSMUSG00000071281
AA Change: P76S

Domain	Start	End	E-Value	Type
KRAB	5	65	9.17e-32	SMART
ZnF_C2H2	81	101	1.05e1	SMART
ZnF_C2H2	109	131	8.4e1	SMART
ZnF_C2H2	137	159	3.58e-2	SMART
ZnF_C2H2	165	187	5.99e-4	SMART
ZnF_C2H2	193	215	1.56e-2	SMART
ZnF_C2H2	221	243	1.95e-3	SMART
ZnF_C2H2	249	271	4.79e-3	SMART
ZnF_C2H2	277	299	3.63e-3	SMART
ZnF_C2H2	305	327	8.22e-2	SMART
ZnF_C2H2	333	355	5.9e-3	SMART
ZnF_C2H2	361	383	2.57e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000127979
AA Change: P73S

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000117218
Gene: ENSMUSG00000071281
AA Change: P73S

Domain	Start	End	E-Value	Type
KRAB	2	62	9.17e-32	SMART
ZnF_C2H2	78	98	1.05e1	SMART
ZnF_C2H2	106	128	8.4e1	SMART
ZnF_C2H2	134	156	3.58e-2	SMART
ZnF_C2H2	162	184	5.99e-4	SMART
ZnF_C2H2	190	212	1.56e-2	SMART
ZnF_C2H2	218	240	1.95e-3	SMART
ZnF_C2H2	246	268	4.79e-3	SMART
ZnF_C2H2	274	296	3.63e-3	SMART
ZnF_C2H2	302	324	8.22e-2	SMART
ZnF_C2H2	330	352	5.9e-3	SMART
ZnF_C2H2	358	380	2.57e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000130891
AA Change: P86S

PolyPhen 2 Score 0.010 (Sensitivity: 0.96; Specificity: 0.77)

SMART Domains

Protein: ENSMUSP00000123380
Gene: ENSMUSG00000071281
AA Change: P86S

Domain	Start	End	E-Value	Type
KRAB	15	75	9.17e-32	SMART
ZnF_C2H2	91	111	1.05e1	SMART
ZnF_C2H2	119	141	8.4e1	SMART
ZnF_C2H2	147	169	3.58e-2	SMART
ZnF_C2H2	175	197	5.99e-4	SMART
ZnF_C2H2	203	225	1.56e-2	SMART
ZnF_C2H2	231	253	1.95e-3	SMART
ZnF_C2H2	259	281	4.79e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000223829
AA Change: P76S

PolyPhen 2 Score 0.213 (Sensitivity: 0.92; Specificity: 0.88)

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 97.9%
20x: 94.0%

Validation Efficiency

98% (54/55)

Allele List at MGI

Other mutations in this stock

Total: 58 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc6	T	C	7: 45,678,468 (GRCm39)	I61V	probably benign	Het
Afg3l2	G	A	18: 67,542,598 (GRCm39)	T616I	possibly damaging	Het
Aktip	T	C	8: 91,852,671 (GRCm39)	N195S	probably damaging	Het
Ankfy1	G	A	11: 72,645,285 (GRCm39)	C788Y	probably benign	Het
Atg7	T	A	6: 114,701,856 (GRCm39)	I621N	probably damaging	Het
Becn1	T	A	11: 101,182,336 (GRCm39)	I283F	probably damaging	Het
Btnl12	T	C	16: 37,676,422 (GRCm39)	Y115C	probably damaging	Het
C4b	T	C	17: 34,952,380 (GRCm39)	T1220A	probably benign	Het
Celsr1	C	A	15: 85,785,222 (GRCm39)	R3004M	probably benign	Het
Clspn	A	T	4: 126,471,529 (GRCm39)		probably null	Het
Csmd3	T	C	15: 48,536,854 (GRCm39)	Y116C	probably damaging	Het
Dcp1a	T	G	14: 30,245,261 (GRCm39)	*603G	probably null	Het
Dmrtc1b	C	T	X: 101,757,169 (GRCm39)	P205S	possibly damaging	Het
Fev	G	T	1: 74,923,698 (GRCm39)		probably benign	Het
Fry	T	A	5: 150,377,987 (GRCm39)	V393E	probably damaging	Het
Gm30646	A	G	7: 30,132,081 (GRCm39)		probably null	Het
Gm3676	C	T	14: 41,363,452 (GRCm39)	E175K	probably benign	Het
Gm4847	T	C	1: 166,469,905 (GRCm39)	Y56C	probably damaging	Het
Gm5422	T	C	10: 31,125,688 (GRCm39)		noncoding transcript	Het
Gstm6	A	G	3: 107,848,397 (GRCm39)	V174A	probably benign	Het
Isoc1	G	T	18: 58,804,664 (GRCm39)	V191F	possibly damaging	Het
Kalrn	T	A	16: 33,874,009 (GRCm39)	D132V	possibly damaging	Het
Kcp	T	C	6: 29,482,887 (GRCm39)	D1394G	possibly damaging	Het
Marchf10	T	G	11: 105,280,440 (GRCm39)	D615A	probably damaging	Het
Mau2	A	G	8: 70,495,187 (GRCm39)	I50T	probably damaging	Het
Mgp	A	G	6: 136,849,722 (GRCm39)	C79R	probably damaging	Het
Mpdz	T	A	4: 81,226,602 (GRCm39)	K1344N	probably damaging	Het
Mrgpre	T	A	7: 143,334,708 (GRCm39)	Y265F	possibly damaging	Het
Mro	G	A	18: 74,006,295 (GRCm39)	V80M	possibly damaging	Het
Mrpl44	G	T	1: 79,755,895 (GRCm39)	C167F	possibly damaging	Het
Muc5b	A	G	7: 141,410,079 (GRCm39)	M1218V	probably null	Het
Naa16	T	C	14: 79,620,780 (GRCm39)	I100V	possibly damaging	Het
Nup205	A	T	6: 35,220,778 (GRCm39)	Y1860F	possibly damaging	Het
Or10aa3	A	T	1: 173,878,533 (GRCm39)	Y198F	probably benign	Het
Or14c40	A	G	7: 86,313,819 (GRCm39)	I316M	probably benign	Het
Or1e16	AGCGGTCGTAGGC	AGC	11: 73,286,480 (GRCm39)		probably null	Het
Or4c103	T	C	2: 88,513,977 (GRCm39)	Y33C	probably damaging	Het
Plcb3	A	G	19: 6,932,071 (GRCm39)		probably null	Het
Pnpla3	G	A	15: 84,065,132 (GRCm39)	A309T	probably benign	Het
Ranbp10	A	G	8: 106,498,296 (GRCm39)	S624P	possibly damaging	Het
Ripor2	T	C	13: 24,894,113 (GRCm39)	S714P	possibly damaging	Het
Robo4	C	T	9: 37,316,926 (GRCm39)	Q414*	probably null	Het
Shc2	A	G	10: 79,465,954 (GRCm39)	I161T	probably damaging	Het
Slc35b2	C	T	17: 45,877,302 (GRCm39)	T143I	probably benign	Het
Slc39a13	T	C	2: 90,898,880 (GRCm39)	D77G	probably damaging	Het
Snx6	A	C	12: 54,807,249 (GRCm39)	D243E	probably damaging	Het
Taar8b	A	G	10: 23,967,711 (GRCm39)	V161A	probably benign	Het
Tbr1	T	A	2: 61,635,159 (GRCm39)	D36E	possibly damaging	Het
Tdpoz2	T	C	3: 93,559,618 (GRCm39)	N118S	probably benign	Het
Tgfb1i1	T	C	7: 127,852,517 (GRCm39)	F478L	probably damaging	Het
Tmprss11f	T	C	5: 86,704,837 (GRCm39)	D27G	probably benign	Het
Trim30d	T	G	7: 104,137,202 (GRCm39)	M1L	probably damaging	Het
Trpm7	A	G	2: 126,679,301 (GRCm39)	V420A	probably damaging	Het
Ubap2	G	T	4: 41,206,981 (GRCm39)	P199H	probably benign	Het
Ubash3b	T	C	9: 40,926,212 (GRCm39)	T512A	probably damaging	Het
Zic5	A	T	14: 122,696,748 (GRCm39)	H622Q	unknown	Het
Zpld1	A	T	16: 55,053,993 (GRCm39)	N266K	probably damaging	Het
Zswim1	A	G	2: 164,667,972 (GRCm39)		probably null	Het

Other mutations in Zfp65

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02094:Zfp65	APN	13	67,856,304 (GRCm39)	missense	possibly damaging	0.92
IGL02563:Zfp65	APN	13	67,856,184 (GRCm39)	missense	possibly damaging	0.88
R2142:Zfp65	UTSW	13	67,856,311 (GRCm39)	missense	probably damaging	1.00
R2169:Zfp65	UTSW	13	67,858,499 (GRCm39)	missense	probably damaging	1.00
R4702:Zfp65	UTSW	13	67,872,341 (GRCm39)	start codon destroyed	probably null	0.98
R4770:Zfp65	UTSW	13	67,856,477 (GRCm39)	missense	probably damaging	1.00
R4836:Zfp65	UTSW	13	67,856,994 (GRCm39)	missense	probably benign	0.15
R4943:Zfp65	UTSW	13	67,859,099 (GRCm39)	missense	probably damaging	0.99
R5229:Zfp65	UTSW	13	67,856,929 (GRCm39)	missense	probably benign	0.02
R6786:Zfp65	UTSW	13	67,856,130 (GRCm39)	missense	probably damaging	1.00
R6991:Zfp65	UTSW	13	67,856,640 (GRCm39)	missense	probably damaging	0.97
R7896:Zfp65	UTSW	13	67,877,174 (GRCm39)	splice site	probably null
R8376:Zfp65	UTSW	13	67,857,037 (GRCm39)	missense	probably damaging	1.00
R9762:Zfp65	UTSW	13	67,856,478 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GGAACACAAGTTAATCTCATAGTGG -3'
(R):5'- TGGTGTGCCCATCAGAAAACATG -3'

Sequencing Primer
(F):5'- TCTCATAGTGGAAGAAAACAAAGC -3'
(R):5'- GCCCATCAGAAAACATGTGAAAAATG -3'

Posted On

2017-10-10