Incidental Mutation 'R0531:Sbf2'
ID 49158
Institutional Source Beutler Lab
Gene Symbol Sbf2
Ensembl Gene ENSMUSG00000038371
Gene Name SET binding factor 2
Synonyms B430219L04Rik, 4833411B01Rik, SBF2, Mtmr13, mMTMH1
MMRRC Submission 038723-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.393) question?
Stock # R0531 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 109907220-110214129 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) G to A at 109966530 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000126217 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000033058] [ENSMUST00000164759] [ENSMUST00000166020]
AlphaFold E9PXF8
Predicted Effect probably benign
Transcript: ENSMUST00000033058
SMART Domains Protein: ENSMUSP00000033058
Gene: ENSMUSG00000038371

DomainStartEndE-ValueType
uDENN 1 87 2.27e-33 SMART
DENN 116 298 5.68e-75 SMART
dDENN 351 420 2e-20 SMART
Pfam:SBF2 530 752 3.3e-106 PFAM
GRAM 869 955 1.3e-12 SMART
low complexity region 1078 1089 N/A INTRINSIC
Pfam:Myotub-related 1091 1544 8.3e-86 PFAM
PH 1767 1872 3.05e-18 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000164525
SMART Domains Protein: ENSMUSP00000128340
Gene: ENSMUSG00000038371

DomainStartEndE-ValueType
low complexity region 16 27 N/A INTRINSIC
Pfam:Myotub-related 28 217 1.5e-21 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000164759
SMART Domains Protein: ENSMUSP00000132072
Gene: ENSMUSG00000038371

DomainStartEndE-ValueType
uDENN 1 87 2.27e-33 SMART
DENN 116 298 5.68e-75 SMART
dDENN 351 420 2e-20 SMART
Pfam:SBF2 528 752 1.6e-107 PFAM
GRAM 869 955 1.3e-12 SMART
Pfam:Myotub-related 1089 1521 1.6e-98 PFAM
PH 1742 1847 3.05e-18 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000166020
SMART Domains Protein: ENSMUSP00000126217
Gene: ENSMUSG00000038371

DomainStartEndE-ValueType
uDENN 1 75 9.26e-1 SMART
DENN 70 252 5.68e-75 SMART
dDENN 305 374 2e-20 SMART
Pfam:SBF2 482 706 1.6e-107 PFAM
GRAM 823 909 1.3e-12 SMART
Pfam:Myotub-related 1043 1500 5.9e-98 PFAM
PH 1721 1826 3.05e-18 SMART
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.8%
  • 20x: 94.3%
Validation Efficiency 100% (69/69)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a pseudophosphatase and member of the myotubularin-related protein family. This gene maps within the CMT4B2 candidate region of chromosome 11p15 and mutations in this gene have been associated with Charcot-Marie-Tooth Disease, type 4B2. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for null alleles display progressive misfolding of myelin sheaths and abnormal nerve electrophysiology. [provided by MGI curators]
Allele List at MGI

All alleles(11) : Targeted, other(2) Gene trapped(9)

Other mutations in this stock
Total: 73 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930590J08Rik A G 6: 91,892,127 (GRCm39) N130D probably benign Het
Acot6 C A 12: 84,148,075 (GRCm39) D110E probably benign Het
Agrn T A 4: 156,263,891 (GRCm39) N124I probably benign Het
Astn1 G T 1: 158,427,959 (GRCm39) G710V probably damaging Het
Bcar3 T C 3: 122,220,148 (GRCm39) V15A probably benign Het
Best3 T C 10: 116,840,280 (GRCm39) probably benign Het
Bltp1 T A 3: 37,090,974 (GRCm39) I743N probably damaging Het
Cenpa T C 5: 30,829,837 (GRCm39) F39L possibly damaging Het
Cfap44 A T 16: 44,221,789 (GRCm39) M1L probably benign Het
Chrnd A G 1: 87,122,541 (GRCm39) I107M probably damaging Het
Col11a2 A G 17: 34,277,351 (GRCm39) probably benign Het
Dnah10 G A 5: 124,889,787 (GRCm39) probably null Het
Entpd8 A G 2: 24,974,781 (GRCm39) Y404C probably damaging Het
Fam118a T C 15: 84,932,633 (GRCm39) I125T possibly damaging Het
Fam161a G A 11: 22,970,298 (GRCm39) E159K possibly damaging Het
Fkbp5 A T 17: 28,657,003 (GRCm39) H71Q probably benign Het
Frem2 A T 3: 53,427,375 (GRCm39) Y2926N probably damaging Het
Gap43 A T 16: 42,112,691 (GRCm39) D23E probably damaging Het
Glt8d1 T C 14: 30,728,461 (GRCm39) F3S probably benign Het
Gm11555 C T 11: 99,540,844 (GRCm39) probably benign Het
Gtpbp1 G A 15: 79,604,292 (GRCm39) G667S probably damaging Het
H2-T24 A C 17: 36,326,463 (GRCm39) S145R probably benign Het
Inpp5b A T 4: 124,689,249 (GRCm39) N843I probably damaging Het
Jak3 C T 8: 72,139,620 (GRCm39) probably benign Het
Krt8 T A 15: 101,909,883 (GRCm39) M174L probably benign Het
Ktn1 C T 14: 47,901,398 (GRCm39) T52I probably damaging Het
Lrp4 T C 2: 91,305,523 (GRCm39) probably benign Het
Nefh G A 11: 4,890,240 (GRCm39) A793V probably damaging Het
Niban1 T C 1: 151,593,835 (GRCm39) V840A probably benign Het
Notch1 A G 2: 26,356,584 (GRCm39) S1678P probably benign Het
Notch2 C T 3: 98,009,767 (GRCm39) probably benign Het
Nrxn3 T C 12: 88,762,112 (GRCm39) F53S probably damaging Het
Or10d4c A G 9: 39,558,168 (GRCm39) T49A probably benign Het
Or2ab1 A G 11: 58,488,674 (GRCm39) I151V probably benign Het
Or5ac25 T A 16: 59,182,171 (GRCm39) N137Y probably damaging Het
Or6z5 A T 7: 6,477,234 (GRCm39) I42F possibly damaging Het
Or8g17 G T 9: 38,930,472 (GRCm39) R122S probably damaging Het
Or9i16 C T 19: 13,865,116 (GRCm39) V153I possibly damaging Het
Pak4 T A 7: 28,267,479 (GRCm39) I62F possibly damaging Het
Pcdhb12 T A 18: 37,570,371 (GRCm39) F506I probably damaging Het
Per1 A T 11: 68,995,016 (GRCm39) D632V probably damaging Het
Plec A G 15: 76,061,498 (GRCm39) M2678T probably benign Het
Plg A G 17: 12,630,334 (GRCm39) probably benign Het
Prmt1 A T 7: 44,627,048 (GRCm39) S304R probably damaging Het
Prr27 T C 5: 87,990,537 (GRCm39) F50L probably benign Het
Prune2 T C 19: 16,984,117 (GRCm39) L159P probably damaging Het
Ptpn12 A T 5: 21,203,481 (GRCm39) N432K possibly damaging Het
Rfwd3 A G 8: 112,020,621 (GRCm39) probably null Het
Rims2 A T 15: 39,430,426 (GRCm39) D1170V probably damaging Het
Sag T C 1: 87,762,351 (GRCm39) probably null Het
Sall4 C T 2: 168,598,256 (GRCm39) A195T probably benign Het
Scaper A T 9: 55,517,158 (GRCm39) D599E possibly damaging Het
Sema7a G A 9: 57,867,876 (GRCm39) S484N possibly damaging Het
Senp1 A G 15: 97,962,761 (GRCm39) probably benign Het
Senp6 A G 9: 80,031,166 (GRCm39) T623A probably damaging Het
Siae A G 9: 37,539,090 (GRCm39) D95G probably benign Het
Slc26a2 T C 18: 61,331,451 (GRCm39) D660G probably damaging Het
Slc3a1 T C 17: 85,336,077 (GRCm39) F73S possibly damaging Het
Slfn5 A T 11: 82,851,866 (GRCm39) Q664L probably damaging Het
Spire1 T C 18: 67,624,375 (GRCm39) I512V probably damaging Het
Srpra A G 9: 35,124,797 (GRCm39) T133A probably benign Het
Stag1 A G 9: 100,836,300 (GRCm39) *175W probably null Het
Stk32c C A 7: 138,700,636 (GRCm39) V316F probably damaging Het
Tekt1 A C 11: 72,236,420 (GRCm39) N347K possibly damaging Het
Tmem81 C G 1: 132,435,567 (GRCm39) I124M probably damaging Het
Tnpo2 T A 8: 85,776,786 (GRCm39) C498S probably damaging Het
Tra2b G A 16: 22,065,955 (GRCm39) R281* probably null Het
Ubr5 A T 15: 37,991,588 (GRCm39) I1985N probably benign Het
Ush2a T G 1: 188,175,378 (GRCm39) S1159A probably benign Het
Vmn1r15 C T 6: 57,235,236 (GRCm39) P35S probably benign Het
Vmn1r6 A T 6: 56,979,583 (GRCm39) I60L probably benign Het
Vps8 A G 16: 21,278,561 (GRCm39) probably benign Het
Xkr7 T C 2: 152,874,272 (GRCm39) V113A possibly damaging Het
Other mutations in Sbf2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00421:Sbf2 APN 7 109,975,039 (GRCm39) splice site probably benign
IGL01089:Sbf2 APN 7 109,948,169 (GRCm39) missense probably damaging 1.00
IGL01144:Sbf2 APN 7 109,929,110 (GRCm39) missense probably damaging 1.00
IGL01652:Sbf2 APN 7 110,046,327 (GRCm39) missense probably damaging 1.00
IGL01950:Sbf2 APN 7 109,965,032 (GRCm39) missense probably benign 0.00
IGL02027:Sbf2 APN 7 110,060,348 (GRCm39) missense probably damaging 1.00
IGL02244:Sbf2 APN 7 110,159,502 (GRCm39) missense probably damaging 1.00
IGL02376:Sbf2 APN 7 110,062,163 (GRCm39) missense probably damaging 0.99
IGL03405:Sbf2 APN 7 110,062,139 (GRCm39) missense probably damaging 0.98
N/A - 535:Sbf2 UTSW 7 109,911,959 (GRCm39) missense probably benign
R0084:Sbf2 UTSW 7 110,041,573 (GRCm39) missense possibly damaging 0.95
R0092:Sbf2 UTSW 7 109,920,013 (GRCm39) splice site probably benign
R0121:Sbf2 UTSW 7 110,088,426 (GRCm39) critical splice donor site probably null
R0464:Sbf2 UTSW 7 110,063,783 (GRCm39) splice site probably benign
R0505:Sbf2 UTSW 7 109,998,550 (GRCm39) missense probably damaging 1.00
R0554:Sbf2 UTSW 7 110,027,494 (GRCm39) missense probably damaging 1.00
R0617:Sbf2 UTSW 7 109,929,890 (GRCm39) frame shift probably null
R0619:Sbf2 UTSW 7 109,909,469 (GRCm39) missense possibly damaging 0.87
R0799:Sbf2 UTSW 7 109,940,562 (GRCm39) missense possibly damaging 0.58
R0898:Sbf2 UTSW 7 109,970,859 (GRCm39) missense possibly damaging 0.59
R1077:Sbf2 UTSW 7 109,966,379 (GRCm39) splice site probably benign
R1167:Sbf2 UTSW 7 109,963,756 (GRCm39) missense probably damaging 1.00
R1169:Sbf2 UTSW 7 109,909,391 (GRCm39) missense probably benign 0.04
R1424:Sbf2 UTSW 7 109,914,233 (GRCm39) missense probably damaging 1.00
R1536:Sbf2 UTSW 7 109,977,250 (GRCm39) missense probably damaging 1.00
R1558:Sbf2 UTSW 7 110,027,553 (GRCm39) missense probably damaging 1.00
R1601:Sbf2 UTSW 7 109,939,283 (GRCm39) critical splice acceptor site probably null
R1762:Sbf2 UTSW 7 109,911,965 (GRCm39) missense probably benign
R1771:Sbf2 UTSW 7 110,060,353 (GRCm39) nonsense probably null
R1989:Sbf2 UTSW 7 109,948,130 (GRCm39) missense possibly damaging 0.94
R2109:Sbf2 UTSW 7 110,060,419 (GRCm39) missense probably damaging 1.00
R2126:Sbf2 UTSW 7 110,159,502 (GRCm39) missense probably damaging 1.00
R2444:Sbf2 UTSW 7 109,929,905 (GRCm39) missense probably benign 0.31
R3765:Sbf2 UTSW 7 109,974,788 (GRCm39) missense probably damaging 1.00
R3808:Sbf2 UTSW 7 110,088,487 (GRCm39) makesense probably null
R3895:Sbf2 UTSW 7 110,046,298 (GRCm39) missense probably damaging 0.99
R3978:Sbf2 UTSW 7 109,929,092 (GRCm39) missense probably benign 0.00
R4056:Sbf2 UTSW 7 110,040,673 (GRCm39) missense probably damaging 0.99
R4057:Sbf2 UTSW 7 110,040,673 (GRCm39) missense probably damaging 0.99
R4111:Sbf2 UTSW 7 110,027,449 (GRCm39) missense probably damaging 1.00
R4569:Sbf2 UTSW 7 109,948,060 (GRCm39) critical splice donor site probably null
R4670:Sbf2 UTSW 7 109,934,606 (GRCm39) missense probably damaging 1.00
R4763:Sbf2 UTSW 7 110,020,124 (GRCm39) missense probably damaging 1.00
R4792:Sbf2 UTSW 7 109,950,817 (GRCm39) missense probably damaging 0.98
R4811:Sbf2 UTSW 7 109,971,742 (GRCm39) missense probably damaging 1.00
R4822:Sbf2 UTSW 7 109,977,146 (GRCm39) intron probably benign
R5110:Sbf2 UTSW 7 109,963,864 (GRCm39) missense probably benign 0.10
R5143:Sbf2 UTSW 7 110,021,747 (GRCm39) nonsense probably null
R5443:Sbf2 UTSW 7 109,977,135 (GRCm39) intron probably benign
R5457:Sbf2 UTSW 7 109,912,037 (GRCm39) missense probably benign
R5641:Sbf2 UTSW 7 110,038,108 (GRCm39) missense probably damaging 1.00
R5915:Sbf2 UTSW 7 109,977,303 (GRCm39) nonsense probably null
R5948:Sbf2 UTSW 7 110,088,492 (GRCm39) missense probably damaging 1.00
R5977:Sbf2 UTSW 7 109,977,193 (GRCm39) missense probably benign 0.00
R6052:Sbf2 UTSW 7 110,040,741 (GRCm39) missense probably damaging 1.00
R6142:Sbf2 UTSW 7 109,948,182 (GRCm39) missense probably damaging 1.00
R6327:Sbf2 UTSW 7 110,040,759 (GRCm39) missense probably damaging 1.00
R6356:Sbf2 UTSW 7 109,971,830 (GRCm39) missense probably damaging 1.00
R6450:Sbf2 UTSW 7 110,062,070 (GRCm39) missense probably damaging 1.00
R6587:Sbf2 UTSW 7 110,040,182 (GRCm39) missense probably damaging 1.00
R6696:Sbf2 UTSW 7 110,159,505 (GRCm39) missense probably benign 0.04
R6986:Sbf2 UTSW 7 109,929,822 (GRCm39) missense probably damaging 0.99
R7147:Sbf2 UTSW 7 110,046,268 (GRCm39) missense probably benign 0.01
R7358:Sbf2 UTSW 7 109,998,555 (GRCm39) missense possibly damaging 0.95
R7414:Sbf2 UTSW 7 109,913,271 (GRCm39) missense possibly damaging 0.89
R7418:Sbf2 UTSW 7 109,965,028 (GRCm39) missense probably damaging 1.00
R7423:Sbf2 UTSW 7 110,038,055 (GRCm39) missense possibly damaging 0.48
R7425:Sbf2 UTSW 7 109,974,984 (GRCm39) nonsense probably null
R7431:Sbf2 UTSW 7 109,950,957 (GRCm39) missense probably damaging 1.00
R7497:Sbf2 UTSW 7 110,213,923 (GRCm39) nonsense probably null
R7556:Sbf2 UTSW 7 109,913,260 (GRCm39) missense probably benign 0.20
R7604:Sbf2 UTSW 7 109,977,274 (GRCm39) missense possibly damaging 0.95
R7707:Sbf2 UTSW 7 109,929,920 (GRCm39) critical splice acceptor site probably null
R7746:Sbf2 UTSW 7 110,040,633 (GRCm39) missense probably benign 0.01
R7812:Sbf2 UTSW 7 110,049,170 (GRCm39) missense possibly damaging 0.84
R7849:Sbf2 UTSW 7 109,971,717 (GRCm39) missense probably damaging 1.00
R8026:Sbf2 UTSW 7 109,934,594 (GRCm39) missense probably damaging 1.00
R8048:Sbf2 UTSW 7 109,914,289 (GRCm39) missense probably benign 0.21
R8305:Sbf2 UTSW 7 109,970,825 (GRCm39) missense possibly damaging 0.79
R8337:Sbf2 UTSW 7 110,040,669 (GRCm39) missense probably benign
R8773:Sbf2 UTSW 7 109,948,202 (GRCm39) missense probably benign
R8786:Sbf2 UTSW 7 110,063,793 (GRCm39) critical splice donor site probably null
R8812:Sbf2 UTSW 7 109,929,069 (GRCm39) missense probably damaging 1.00
R8876:Sbf2 UTSW 7 110,049,146 (GRCm39) missense probably damaging 0.99
R8932:Sbf2 UTSW 7 110,040,155 (GRCm39) critical splice donor site probably null
R8954:Sbf2 UTSW 7 110,038,118 (GRCm39) nonsense probably null
R8991:Sbf2 UTSW 7 109,911,896 (GRCm39) missense probably benign 0.20
R9119:Sbf2 UTSW 7 109,911,292 (GRCm39) missense possibly damaging 0.93
R9310:Sbf2 UTSW 7 109,914,292 (GRCm39) missense possibly damaging 0.58
R9344:Sbf2 UTSW 7 109,940,535 (GRCm39) missense probably benign 0.10
R9346:Sbf2 UTSW 7 109,919,946 (GRCm39) missense probably benign 0.05
R9404:Sbf2 UTSW 7 110,040,702 (GRCm39) missense possibly damaging 0.81
R9406:Sbf2 UTSW 7 110,040,702 (GRCm39) missense possibly damaging 0.81
R9408:Sbf2 UTSW 7 110,040,702 (GRCm39) missense possibly damaging 0.81
R9472:Sbf2 UTSW 7 109,970,798 (GRCm39) missense possibly damaging 0.88
R9554:Sbf2 UTSW 7 110,040,671 (GRCm39) missense probably damaging 1.00
R9562:Sbf2 UTSW 7 110,040,702 (GRCm39) missense possibly damaging 0.81
R9624:Sbf2 UTSW 7 109,963,857 (GRCm39) missense probably damaging 1.00
R9652:Sbf2 UTSW 7 110,040,702 (GRCm39) missense possibly damaging 0.81
R9653:Sbf2 UTSW 7 110,040,702 (GRCm39) missense possibly damaging 0.81
R9709:Sbf2 UTSW 7 110,027,514 (GRCm39) missense probably damaging 0.99
RF005:Sbf2 UTSW 7 109,916,215 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GCCAAAGGAACCCTGAAGTAGAGTC -3'
(R):5'- atgcccagcATGAGAGACCTTGTC -3'

Sequencing Primer
(F):5'- CCCTGAAGTAGAGTCCAAAGTC -3'
(R):5'- CTCTGCTGATGAATTGCTGC -3'
Posted On 2013-06-12