Incidental Mutation 'IGL01062:Glb1l'
ID |
50169 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Glb1l
|
Ensembl Gene |
ENSMUSG00000026200 |
Gene Name |
galactosidase, beta 1-like |
Synonyms |
4833408P15Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.128)
|
Stock # |
IGL01062
|
Quality Score |
|
Status
|
|
Chromosome |
1 |
Chromosomal Location |
75174880-75187457 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 75177882 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Asparagine
at position 392
(I392N)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000136285
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000113623]
[ENSMUST00000145459]
[ENSMUST00000155716]
[ENSMUST00000185448]
[ENSMUST00000152233]
|
AlphaFold |
Q8VC60 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000113623
AA Change: I392N
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000109253 Gene: ENSMUSG00000026200 AA Change: I392N
Domain | Start | End | E-Value | Type |
low complexity region
|
5 |
19 |
N/A |
INTRINSIC |
Pfam:Glyco_hydro_35
|
34 |
351 |
4.1e-123 |
PFAM |
Pfam:Glyco_hydro_42
|
48 |
209 |
6.6e-12 |
PFAM |
low complexity region
|
355 |
371 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000127860
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000131788
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000132507
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000134233
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000143193
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000145459
|
SMART Domains |
Protein: ENSMUSP00000135971 Gene: ENSMUSG00000026199
Domain | Start | End | E-Value | Type |
low complexity region
|
19 |
45 |
N/A |
INTRINSIC |
Blast:ZnF_C2H2
|
96 |
120 |
1e-9 |
BLAST |
low complexity region
|
143 |
171 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000155716
AA Change: I392N
PolyPhen 2
Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000136285 Gene: ENSMUSG00000026200 AA Change: I392N
Domain | Start | End | E-Value | Type |
low complexity region
|
5 |
19 |
N/A |
INTRINSIC |
Pfam:Glyco_hydro_35
|
34 |
351 |
4.2e-125 |
PFAM |
Pfam:Glyco_hydro_42
|
48 |
209 |
6.6e-12 |
PFAM |
low complexity region
|
355 |
371 |
N/A |
INTRINSIC |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000186173
AA Change: I296N
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000146713
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000153584
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000186148
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000185449
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000185448
|
SMART Domains |
Protein: ENSMUSP00000140820 Gene: ENSMUSG00000026200
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
Pfam:Glyco_hydro_35
|
34 |
188 |
1.6e-71 |
PFAM |
Pfam:Glyco_hydro_42
|
48 |
188 |
6.4e-10 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000189663
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000152233
|
SMART Domains |
Protein: ENSMUSP00000136163 Gene: ENSMUSG00000026199
Domain | Start | End | E-Value | Type |
low complexity region
|
19 |
45 |
N/A |
INTRINSIC |
Blast:ZnF_C2H2
|
96 |
120 |
6e-11 |
BLAST |
low complexity region
|
143 |
171 |
N/A |
INTRINSIC |
low complexity region
|
394 |
407 |
N/A |
INTRINSIC |
low complexity region
|
425 |
451 |
N/A |
INTRINSIC |
low complexity region
|
459 |
469 |
N/A |
INTRINSIC |
Blast:ANK
|
515 |
545 |
2e-9 |
BLAST |
ANK
|
556 |
585 |
6.81e-3 |
SMART |
coiled coil region
|
628 |
681 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 43 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Aen |
G |
A |
7: 78,557,050 (GRCm39) |
M299I |
probably damaging |
Het |
Amer3 |
A |
G |
1: 34,625,820 (GRCm39) |
K20E |
probably damaging |
Het |
Arhgap31 |
A |
G |
16: 38,421,818 (GRCm39) |
L1416P |
probably damaging |
Het |
Avpr1a |
G |
A |
10: 122,285,434 (GRCm39) |
C242Y |
probably damaging |
Het |
Bclaf3 |
T |
C |
X: 158,336,415 (GRCm39) |
Y281H |
probably benign |
Het |
Cdc14a |
T |
A |
3: 116,068,361 (GRCm39) |
|
probably benign |
Het |
Cfap206 |
C |
T |
4: 34,721,562 (GRCm39) |
S162N |
probably damaging |
Het |
Cntn4 |
T |
C |
6: 106,595,239 (GRCm39) |
|
probably benign |
Het |
Cyp3a44 |
T |
A |
5: 145,731,149 (GRCm39) |
D217V |
possibly damaging |
Het |
Eprs1 |
A |
G |
1: 185,111,812 (GRCm39) |
E274G |
probably benign |
Het |
Ercc6l2 |
G |
T |
13: 63,995,268 (GRCm39) |
Q354H |
probably null |
Het |
Gm3173 |
T |
C |
14: 15,728,472 (GRCm39) |
|
probably null |
Het |
Hadh |
C |
T |
3: 131,034,640 (GRCm39) |
V219M |
probably damaging |
Het |
Hspb9 |
A |
G |
11: 100,604,761 (GRCm39) |
H29R |
possibly damaging |
Het |
Iqgap3 |
G |
T |
3: 88,017,429 (GRCm39) |
V240L |
probably benign |
Het |
Jmjd1c |
T |
C |
10: 67,062,494 (GRCm39) |
S1616P |
probably damaging |
Het |
Knl1 |
A |
G |
2: 118,907,461 (GRCm39) |
I1662V |
probably benign |
Het |
Maco1 |
A |
T |
4: 134,560,608 (GRCm39) |
V125E |
probably damaging |
Het |
Mapre3 |
A |
G |
5: 31,022,240 (GRCm39) |
I236V |
probably benign |
Het |
Med17 |
T |
C |
9: 15,190,917 (GRCm39) |
E58G |
probably benign |
Het |
Myh6 |
T |
C |
14: 55,189,749 (GRCm39) |
E1099G |
probably damaging |
Het |
Myt1 |
T |
A |
2: 181,439,522 (GRCm39) |
V348D |
probably damaging |
Het |
Nat10 |
A |
T |
2: 103,573,393 (GRCm39) |
I368N |
probably damaging |
Het |
Nol6 |
T |
C |
4: 41,118,205 (GRCm39) |
I811V |
probably benign |
Het |
Oas1d |
C |
A |
5: 121,057,127 (GRCm39) |
Y244* |
probably null |
Het |
Or6e1 |
A |
T |
14: 54,520,181 (GRCm39) |
M57K |
probably damaging |
Het |
Osbpl1a |
A |
G |
18: 13,038,132 (GRCm39) |
V273A |
probably benign |
Het |
Pigw |
T |
C |
11: 84,768,769 (GRCm39) |
R187G |
probably benign |
Het |
Plekhg5 |
G |
A |
4: 152,192,953 (GRCm39) |
D603N |
probably damaging |
Het |
Ptprk |
T |
C |
10: 28,456,414 (GRCm39) |
V1058A |
probably damaging |
Het |
Robo4 |
G |
A |
9: 37,317,296 (GRCm39) |
S537N |
probably benign |
Het |
Rptn |
T |
A |
3: 93,304,489 (GRCm39) |
F607L |
probably benign |
Het |
Sall1 |
A |
G |
8: 89,759,972 (GRCm39) |
V44A |
probably damaging |
Het |
Sh3bp4 |
C |
A |
1: 89,071,682 (GRCm39) |
Q177K |
probably benign |
Het |
Skic3 |
T |
A |
13: 76,303,581 (GRCm39) |
L1225* |
probably null |
Het |
Spmip6 |
T |
A |
4: 41,511,433 (GRCm39) |
E93D |
probably damaging |
Het |
Srrt |
C |
A |
5: 137,294,569 (GRCm39) |
G779V |
probably damaging |
Het |
Tamalin |
A |
G |
15: 101,126,777 (GRCm39) |
|
probably benign |
Het |
Tex21 |
T |
C |
12: 76,245,718 (GRCm39) |
D526G |
probably benign |
Het |
Vmn1r10 |
A |
G |
6: 57,090,821 (GRCm39) |
S138G |
possibly damaging |
Het |
Yars2 |
C |
T |
16: 16,124,406 (GRCm39) |
R338* |
probably null |
Het |
Zfp454 |
T |
C |
11: 50,765,033 (GRCm39) |
E22G |
probably benign |
Het |
Zzef1 |
T |
A |
11: 72,765,795 (GRCm39) |
C1441S |
probably benign |
Het |
|
Other mutations in Glb1l |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01477:Glb1l
|
APN |
1 |
75,185,350 (GRCm39) |
missense |
probably damaging |
1.00 |
R0408:Glb1l
|
UTSW |
1 |
75,185,479 (GRCm39) |
missense |
probably damaging |
1.00 |
R0620:Glb1l
|
UTSW |
1 |
75,176,364 (GRCm39) |
missense |
probably damaging |
1.00 |
R1639:Glb1l
|
UTSW |
1 |
75,176,245 (GRCm39) |
missense |
probably benign |
0.16 |
R1842:Glb1l
|
UTSW |
1 |
75,177,104 (GRCm39) |
missense |
probably damaging |
0.96 |
R2508:Glb1l
|
UTSW |
1 |
75,178,473 (GRCm39) |
missense |
probably damaging |
0.99 |
R2920:Glb1l
|
UTSW |
1 |
75,185,834 (GRCm39) |
missense |
probably benign |
|
R3439:Glb1l
|
UTSW |
1 |
75,179,264 (GRCm39) |
missense |
probably damaging |
1.00 |
R4096:Glb1l
|
UTSW |
1 |
75,186,084 (GRCm39) |
start codon destroyed |
probably benign |
0.01 |
R4517:Glb1l
|
UTSW |
1 |
75,185,347 (GRCm39) |
missense |
probably damaging |
1.00 |
R4829:Glb1l
|
UTSW |
1 |
75,176,994 (GRCm39) |
missense |
probably damaging |
0.96 |
R4851:Glb1l
|
UTSW |
1 |
75,185,528 (GRCm39) |
unclassified |
probably benign |
|
R4859:Glb1l
|
UTSW |
1 |
75,176,963 (GRCm39) |
splice site |
probably benign |
|
R4951:Glb1l
|
UTSW |
1 |
75,185,019 (GRCm39) |
missense |
probably damaging |
1.00 |
R6163:Glb1l
|
UTSW |
1 |
75,178,051 (GRCm39) |
missense |
probably benign |
|
R6519:Glb1l
|
UTSW |
1 |
75,177,700 (GRCm39) |
missense |
probably benign |
0.41 |
R6693:Glb1l
|
UTSW |
1 |
75,185,745 (GRCm39) |
missense |
probably damaging |
1.00 |
R6713:Glb1l
|
UTSW |
1 |
75,179,061 (GRCm39) |
missense |
probably benign |
0.02 |
R6833:Glb1l
|
UTSW |
1 |
75,178,397 (GRCm39) |
missense |
possibly damaging |
0.93 |
R6834:Glb1l
|
UTSW |
1 |
75,178,397 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7068:Glb1l
|
UTSW |
1 |
75,179,381 (GRCm39) |
missense |
probably damaging |
1.00 |
R7453:Glb1l
|
UTSW |
1 |
75,179,350 (GRCm39) |
missense |
probably damaging |
1.00 |
R7694:Glb1l
|
UTSW |
1 |
75,178,436 (GRCm39) |
missense |
probably damaging |
1.00 |
R8784:Glb1l
|
UTSW |
1 |
75,176,975 (GRCm39) |
missense |
probably damaging |
1.00 |
R9408:Glb1l
|
UTSW |
1 |
75,177,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R9538:Glb1l
|
UTSW |
1 |
75,178,096 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2013-06-21 |