Incidental Mutation 'R6056:Vmn2r106'
ID 502029
Institutional Source Beutler Lab
Gene Symbol Vmn2r106
Ensembl Gene ENSMUSG00000091656
Gene Name vomeronasal 2, receptor 106
Synonyms EG224576
MMRRC Submission 044223-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.166) question?
Stock # R6056 (G1)
Quality Score 225.009
Status Validated
Chromosome 17
Chromosomal Location 20487809-20505692 bp(-) (GRCm39)
Type of Mutation splice site (3 bp from exon)
DNA Base Change (assembly) T to A at 20487806 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000126534 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000167464]
AlphaFold E9PY92
Predicted Effect probably null
Transcript: ENSMUST00000167464
SMART Domains Protein: ENSMUSP00000126534
Gene: ENSMUSG00000091656

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
Pfam:ANF_receptor 83 471 3.8e-37 PFAM
Pfam:NCD3G 514 567 5.7e-22 PFAM
Pfam:7tm_3 596 835 1.3e-49 PFAM
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.7%
  • 10x: 98.4%
  • 20x: 95.4%
Validation Efficiency 96% (99/103)
Allele List at MGI
Other mutations in this stock
Total: 101 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2310002L09Rik A T 4: 73,861,115 (GRCm39) W162R probably benign Het
4930438A08Rik C A 11: 58,184,464 (GRCm39) P394H probably damaging Het
Aggf1 C T 13: 95,508,123 (GRCm39) C81Y probably benign Het
Agxt2 A T 15: 10,378,963 (GRCm39) D188V probably damaging Het
Angpt2 T C 8: 18,748,132 (GRCm39) K376R probably benign Het
Anxa5 A G 3: 36,504,840 (GRCm39) S241P probably damaging Het
Aox3 A T 1: 58,209,018 (GRCm39) K850N probably damaging Het
Arid5a T C 1: 36,358,473 (GRCm39) M415T probably benign Het
Aspa T A 11: 73,199,578 (GRCm39) N233I probably damaging Het
Atp4b C T 8: 13,438,782 (GRCm39) R198Q probably damaging Het
Atp8b2 A T 3: 89,853,528 (GRCm39) V719E possibly damaging Het
Bltp2 C A 11: 78,162,210 (GRCm39) L691I possibly damaging Het
Cacna1s T G 1: 136,033,574 (GRCm39) V1017G probably damaging Het
Chrna4 G T 2: 180,671,235 (GRCm39) Q174K probably damaging Het
Chrnb1 A T 11: 69,677,765 (GRCm39) V329D probably damaging Het
Chst14 T C 2: 118,758,214 (GRCm39) L336P probably damaging Het
Clec2e T C 6: 129,077,772 (GRCm39) D22G probably benign Het
Csrnp2 A C 15: 100,380,263 (GRCm39) S343A probably benign Het
Dapl1 C A 2: 59,315,057 (GRCm39) A2E probably damaging Het
Dlec1 G T 9: 118,950,991 (GRCm39) R519L probably damaging Het
Dmgdh T A 13: 93,845,251 (GRCm39) F415I possibly damaging Het
Dmgdh T C 13: 93,888,834 (GRCm39) V824A probably damaging Het
Dnah11 T G 12: 117,892,191 (GRCm39) T3661P probably benign Het
Dnah3 A G 7: 119,629,254 (GRCm39) F1434L probably damaging Het
Dnajc11 C A 4: 152,062,583 (GRCm39) probably benign Het
Dot1l A G 10: 80,621,929 (GRCm39) E527G probably damaging Het
Drc7 T C 8: 95,801,679 (GRCm39) L680P probably damaging Het
Dysf T C 6: 84,083,844 (GRCm39) Y742H probably benign Het
Ece1 A G 4: 137,688,958 (GRCm39) Y665C probably damaging Het
Emc1 A G 4: 139,081,533 (GRCm39) K54E possibly damaging Het
Enoph1 C T 5: 100,215,760 (GRCm39) T247M probably damaging Het
Exoc2 T C 13: 31,084,812 (GRCm39) K383R probably benign Het
Fam227b A T 2: 125,962,972 (GRCm39) H181Q probably damaging Het
Fsip2 A T 2: 82,816,017 (GRCm39) M3917L probably benign Het
Gtf3a T A 5: 146,892,338 (GRCm39) probably benign Het
Hgfac T A 5: 35,198,973 (GRCm39) C11* probably null Het
Hmcn1 C A 1: 150,539,660 (GRCm39) A2944S probably damaging Het
Hps5 T A 7: 46,416,521 (GRCm39) Y947F probably benign Het
Ighv2-5 A T 12: 113,649,120 (GRCm39) I111K probably benign Het
Inpp5e A T 2: 26,297,860 (GRCm39) L247* probably null Het
Kbtbd11 T C 8: 15,077,577 (GRCm39) S59P probably benign Het
Kctd19 G A 8: 106,123,082 (GRCm39) H111Y probably damaging Het
Kif1a T C 1: 92,952,370 (GRCm39) D1303G probably damaging Het
Kif7 A G 7: 79,363,842 (GRCm39) V22A possibly damaging Het
Lrit3 A T 3: 129,583,004 (GRCm39) C328S probably damaging Het
Lrrc37a G T 11: 103,388,484 (GRCm39) Q2314K unknown Het
LTO1 G T 7: 144,469,023 (GRCm39) V17L possibly damaging Het
Lurap1 G T 4: 115,994,599 (GRCm39) P211T possibly damaging Het
Mbd2 T A 18: 70,713,874 (GRCm39) N5K possibly damaging Het
Mbtps1 A C 8: 120,242,341 (GRCm39) L894V probably benign Het
Mefv G A 16: 3,525,906 (GRCm39) S787F possibly damaging Het
Miip T A 4: 147,946,792 (GRCm39) I289F probably damaging Het
Mogat2 T A 7: 98,872,720 (GRCm39) I155F possibly damaging Het
Mpp3 C A 11: 101,902,515 (GRCm39) probably null Het
Mrrf A G 2: 36,067,233 (GRCm39) K220E probably damaging Het
Mtmr6 C T 14: 60,535,619 (GRCm39) P485L probably damaging Het
Mtor G A 4: 148,621,892 (GRCm39) R1896K probably benign Het
Myh3 C T 11: 66,978,371 (GRCm39) P453S probably benign Het
Nebl A G 2: 17,455,045 (GRCm39) V112A probably benign Het
Nmnat2 G A 1: 152,950,480 (GRCm39) W55* probably null Het
Nprl3 A G 11: 32,217,432 (GRCm39) S37P probably damaging Het
Or4a73 T C 2: 89,421,445 (GRCm39) N5D possibly damaging Het
Pcdhga4 T G 18: 37,819,383 (GRCm39) S311A probably benign Het
Pcdhgb6 T C 18: 37,876,165 (GRCm39) V291A probably benign Het
Peg10 GAT GATCAT 6: 4,756,449 (GRCm39) probably benign Het
Peg3 T C 7: 6,712,570 (GRCm39) E884G probably damaging Het
Pgpep1 G A 8: 71,105,101 (GRCm39) T53M probably damaging Het
Phf12 A G 11: 77,900,341 (GRCm39) T146A probably benign Het
Polr3k C G 2: 181,506,281 (GRCm39) N10K probably damaging Het
Prickle4 C A 17: 48,001,135 (GRCm39) G144C probably damaging Het
Ptpn6 T C 6: 124,709,398 (GRCm39) Y25C probably damaging Het
Rad1 A G 15: 10,488,160 (GRCm39) I95V probably damaging Het
Rad23b A G 4: 55,382,540 (GRCm39) T248A probably benign Het
Rapgef3 T C 15: 97,656,742 (GRCm39) D299G probably damaging Het
Rcc2 T G 4: 140,444,335 (GRCm39) V342G possibly damaging Het
Rgs3 G T 4: 62,544,143 (GRCm39) R136L probably damaging Het
Scube2 A T 7: 109,432,220 (GRCm39) C399* probably null Het
Serpinb3d T C 1: 107,007,452 (GRCm39) Y178C probably damaging Het
Slc1a7 A G 4: 107,869,458 (GRCm39) T508A probably benign Het
Slc29a4 C T 5: 142,705,832 (GRCm39) R439C probably damaging Het
Sntg2 A G 12: 30,362,560 (GRCm39) I62T probably benign Het
Sowaha G A 11: 53,369,914 (GRCm39) P274L probably damaging Het
Sptan1 A G 2: 29,886,794 (GRCm39) N869S probably benign Het
Stx18 C A 5: 38,263,908 (GRCm39) A64D probably damaging Het
Stxbp5 A G 10: 9,646,430 (GRCm39) V94A probably benign Het
Sult1a1 T A 7: 126,275,624 (GRCm39) probably null Het
Susd1 G T 4: 59,379,687 (GRCm39) H313Q possibly damaging Het
Tdrd9 A T 12: 111,951,475 (GRCm39) K88N probably damaging Het
Tlr5 A C 1: 182,801,603 (GRCm39) R302S possibly damaging Het
Tnr C T 1: 159,714,479 (GRCm39) T786I probably damaging Het
Tprg1l A G 4: 154,244,552 (GRCm39) S148P probably damaging Het
Trpc4ap T A 2: 155,512,994 (GRCm39) N127I probably damaging Het
Tulp2 T A 7: 45,139,797 (GRCm39) probably null Het
Uggt2 C T 14: 119,273,381 (GRCm39) probably null Het
Ulk4 T A 9: 121,102,021 (GRCm39) Y19F probably damaging Het
Upf1 T C 8: 70,785,687 (GRCm39) Y1053C probably damaging Het
Vars2 A T 17: 35,976,680 (GRCm39) H223Q probably benign Het
Ythdc2 T A 18: 44,973,277 (GRCm39) F305I probably damaging Het
Zfp281 T C 1: 136,553,178 (GRCm39) F52S possibly damaging Het
Zfp292 A T 4: 34,809,784 (GRCm39) C1087S probably damaging Het
Zfp335 A T 2: 164,737,018 (GRCm39) probably null Het
Other mutations in Vmn2r106
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00979:Vmn2r106 APN 17 20,497,837 (GRCm39) missense possibly damaging 0.90
IGL01313:Vmn2r106 APN 17 20,498,651 (GRCm39) missense probably damaging 0.99
IGL01419:Vmn2r106 APN 17 20,499,807 (GRCm39) missense probably benign 0.06
IGL01574:Vmn2r106 APN 17 20,488,572 (GRCm39) missense possibly damaging 0.94
IGL01796:Vmn2r106 APN 17 20,488,314 (GRCm39) missense possibly damaging 0.79
IGL01893:Vmn2r106 APN 17 20,497,730 (GRCm39) missense probably benign 0.06
IGL01895:Vmn2r106 APN 17 20,499,227 (GRCm39) missense probably benign 0.02
IGL02378:Vmn2r106 APN 17 20,497,791 (GRCm39) missense probably damaging 1.00
IGL02430:Vmn2r106 APN 17 20,499,158 (GRCm39) missense probably benign 0.38
IGL02664:Vmn2r106 APN 17 20,488,344 (GRCm39) missense possibly damaging 0.88
IGL03308:Vmn2r106 APN 17 20,498,785 (GRCm39) nonsense probably null
IGL03384:Vmn2r106 APN 17 20,488,405 (GRCm39) missense probably damaging 0.99
R0401:Vmn2r106 UTSW 17 20,499,281 (GRCm39) missense possibly damaging 0.86
R0842:Vmn2r106 UTSW 17 20,488,465 (GRCm39) missense probably damaging 1.00
R0964:Vmn2r106 UTSW 17 20,487,859 (GRCm39) missense probably benign 0.00
R1235:Vmn2r106 UTSW 17 20,499,741 (GRCm39) missense probably benign 0.00
R1709:Vmn2r106 UTSW 17 20,499,373 (GRCm39) missense probably benign 0.12
R1712:Vmn2r106 UTSW 17 20,498,997 (GRCm39) missense probably benign 0.01
R1770:Vmn2r106 UTSW 17 20,488,560 (GRCm39) missense probably damaging 0.99
R2049:Vmn2r106 UTSW 17 20,488,566 (GRCm39) missense possibly damaging 0.90
R2245:Vmn2r106 UTSW 17 20,488,423 (GRCm39) missense probably benign 0.13
R2336:Vmn2r106 UTSW 17 20,488,470 (GRCm39) missense probably benign 0.18
R2910:Vmn2r106 UTSW 17 20,498,946 (GRCm39) missense probably damaging 1.00
R3025:Vmn2r106 UTSW 17 20,499,147 (GRCm39) missense probably benign 0.00
R3944:Vmn2r106 UTSW 17 20,487,913 (GRCm39) missense probably damaging 1.00
R4081:Vmn2r106 UTSW 17 20,487,818 (GRCm39) nonsense probably null
R4153:Vmn2r106 UTSW 17 20,488,080 (GRCm39) missense probably damaging 1.00
R4356:Vmn2r106 UTSW 17 20,499,910 (GRCm39) missense probably benign 0.06
R4426:Vmn2r106 UTSW 17 20,505,641 (GRCm39) missense probably benign 0.00
R4590:Vmn2r106 UTSW 17 20,497,728 (GRCm39) missense probably damaging 0.99
R4661:Vmn2r106 UTSW 17 20,487,885 (GRCm39) missense probably benign 0.10
R5106:Vmn2r106 UTSW 17 20,499,395 (GRCm39) critical splice acceptor site probably null
R5341:Vmn2r106 UTSW 17 20,497,788 (GRCm39) missense probably benign 0.00
R5509:Vmn2r106 UTSW 17 20,498,684 (GRCm39) missense probably damaging 0.99
R5826:Vmn2r106 UTSW 17 20,499,133 (GRCm39) missense probably benign
R5859:Vmn2r106 UTSW 17 20,505,583 (GRCm39) missense possibly damaging 0.72
R5937:Vmn2r106 UTSW 17 20,505,667 (GRCm39) nonsense probably null
R5972:Vmn2r106 UTSW 17 20,498,738 (GRCm39) missense probably benign
R6108:Vmn2r106 UTSW 17 20,488,638 (GRCm39) missense probably benign 0.11
R6114:Vmn2r106 UTSW 17 20,488,638 (GRCm39) missense probably benign 0.11
R6115:Vmn2r106 UTSW 17 20,488,638 (GRCm39) missense probably benign 0.11
R6132:Vmn2r106 UTSW 17 20,488,666 (GRCm39) missense probably benign
R6208:Vmn2r106 UTSW 17 20,488,591 (GRCm39) missense probably damaging 0.99
R6217:Vmn2r106 UTSW 17 20,488,501 (GRCm39) missense probably benign 0.10
R6289:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6378:Vmn2r106 UTSW 17 20,498,667 (GRCm39) missense probably benign 0.19
R6390:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6391:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6392:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6405:Vmn2r106 UTSW 17 20,499,361 (GRCm39) missense probably benign 0.22
R6427:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6428:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6435:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6436:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6437:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6511:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6512:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6587:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6703:Vmn2r106 UTSW 17 20,488,725 (GRCm39) missense probably damaging 1.00
R6730:Vmn2r106 UTSW 17 20,499,096 (GRCm39) missense possibly damaging 0.64
R6961:Vmn2r106 UTSW 17 20,488,646 (GRCm39) nonsense probably null
R7054:Vmn2r106 UTSW 17 20,499,182 (GRCm39) missense probably damaging 0.96
R7379:Vmn2r106 UTSW 17 20,488,037 (GRCm39) missense possibly damaging 0.75
R7402:Vmn2r106 UTSW 17 20,487,883 (GRCm39) missense probably damaging 0.99
R7497:Vmn2r106 UTSW 17 20,488,201 (GRCm39) missense probably damaging 1.00
R7692:Vmn2r106 UTSW 17 20,505,490 (GRCm39) missense possibly damaging 0.96
R8539:Vmn2r106 UTSW 17 20,499,271 (GRCm39) missense probably benign 0.00
R8827:Vmn2r106 UTSW 17 20,487,868 (GRCm39) missense probably benign 0.05
R8872:Vmn2r106 UTSW 17 20,488,401 (GRCm39) missense probably benign 0.19
R9118:Vmn2r106 UTSW 17 20,505,667 (GRCm39) missense probably benign 0.00
R9254:Vmn2r106 UTSW 17 20,496,066 (GRCm39) missense probably damaging 1.00
R9379:Vmn2r106 UTSW 17 20,496,066 (GRCm39) missense probably damaging 1.00
R9571:Vmn2r106 UTSW 17 20,505,641 (GRCm39) missense probably benign 0.17
Predicted Primers PCR Primer
(F):5'- ACATTGTACAGTTACCATGCCAAC -3'
(R):5'- CATGGTGGCTATGGAAGTCTTC -3'

Posted On 2018-02-19