Mutagenetix > Incidental Mutation

Incidental Mutation 'R6192:Wsb1'

502664

Institutional Source

Beutler Lab

Gene Symbol

Wsb1

Ensembl Gene

ENSMUSG00000017677

Gene Name

WD repeat and SOCS box-containing 1

Synonyms

2700038M07Rik, 1110056B13Rik

MMRRC Submission

044332-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.447) question?

Stock #

R6192 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

79130198-79145497 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 79139336 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Proline to Leucine at position 120 (P120L)

Ref Sequence

ENSEMBL: ENSMUSP00000017821 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000017821] [ENSMUST00000131848] [ENSMUST00000145772]

AlphaFold

O54927

Predicted Effect

possibly damaging
Transcript: ENSMUST00000017821
AA Change: P120L

PolyPhen 2 Score 0.938 (Sensitivity: 0.80; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000017821
Gene: ENSMUSG00000017677
AA Change: P120L

Domain	Start	End	E-Value	Type
Blast:WD40	25	62	2e-16	BLAST
WD40	117	156	8.4e-2	SMART
WD40	159	199	2.5e-10	SMART
WD40	203	242	5.9e-10	SMART
WD40	245	284	2.9e-11	SMART
WD40	300	339	1.2e-5	SMART
WD40	342	379	1.1e-4	SMART
SOCS	378	420	2.7e-18	SMART
SOCS_box	384	420	4.1e-12	SMART

Predicted Effect

unknown
Transcript: ENSMUST00000131818
AA Change: P50L

SMART Domains

Protein: ENSMUSP00000131290
Gene: ENSMUSG00000017677
AA Change: P50L

Domain	Start	End	E-Value	Type
WD40	48	87	1.33e1	SMART
WD40	90	130	3.72e-8	SMART
WD40	134	172	4.18e-2	SMART

Predicted Effect

silent
Transcript: ENSMUST00000131848

SMART Domains

Protein: ENSMUSP00000128181
Gene: ENSMUSG00000017677

Domain	Start	End	E-Value	Type
Blast:WD40	25	62	2e-19	BLAST

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000137890

Predicted Effect

probably benign
Transcript: ENSMUST00000145772

SMART Domains

Protein: ENSMUSP00000137999
Gene: ENSMUSG00000017677

Domain	Start	End	E-Value	Type
Blast:WD40	25	62	3e-19	BLAST

Meta Mutation Damage Score

0.1922

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

100% (75/75)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the WD-protein subfamily. This protein shares a high sequence identity to mouse and chick proteins. It contains several WD-repeats spanning most of the protein and an SOCS box in the C-terminus. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamts9	T	C	6: 92,774,002 (GRCm39)	E1137G	probably damaging	Het
Adcy9	T	C	16: 4,105,818 (GRCm39)	I1099V	probably benign	Het
Angptl4	A	T	17: 33,996,015 (GRCm39)	N320K	probably benign	Het
Atp6v0a2	G	A	5: 124,767,268 (GRCm39)	M10I	probably benign	Het
Bltp1	C	T	3: 37,042,318 (GRCm39)	T2768I	probably benign	Het
Cbfa2t3	A	G	8: 123,361,135 (GRCm39)	S395P	probably benign	Het
Cenpe	C	T	3: 134,954,291 (GRCm39)	T1716I	possibly damaging	Het
Chsy1	T	C	7: 65,820,625 (GRCm39)	Y287H	probably benign	Het
Col4a4	G	T	1: 82,462,151 (GRCm39)	P1075T	probably damaging	Het
Cryab	T	A	9: 50,665,813 (GRCm39)	M68K	probably damaging	Het
Cybrd1	T	A	2: 70,967,858 (GRCm39)	L143Q	probably null	Het
Dcaf7	T	C	11: 105,942,584 (GRCm39)	V177A	probably damaging	Het
Dclk2	T	C	3: 86,722,457 (GRCm39)	Y392C	probably damaging	Het
Ddx20	T	C	3: 105,586,036 (GRCm39)	T770A	probably benign	Het
Dennd1b	T	A	1: 139,095,456 (GRCm39)	D501E	probably benign	Het
Dgkh	A	T	14: 78,865,504 (GRCm39)	Y26*	probably null	Het
Dnajc2	A	G	5: 21,973,646 (GRCm39)	V196A	probably damaging	Het
Etl4	A	G	2: 20,806,362 (GRCm39)	K827E	probably damaging	Het
Fam8a1	C	T	13: 46,823,099 (GRCm39)	P13L	probably damaging	Het
Gfra3	T	C	18: 34,837,582 (GRCm39)	S139G	possibly damaging	Het
Ggnbp1	G	A	17: 27,248,847 (GRCm39)	V139I	possibly damaging	Het
Gja1	T	A	10: 56,264,330 (GRCm39)	Y230N	probably damaging	Het
Gldc	A	G	19: 30,111,172 (GRCm39)	S535P	probably damaging	Het
Gm45871	A	G	18: 90,610,357 (GRCm39)	T532A	probably benign	Het
Gm5431	T	A	11: 48,785,220 (GRCm39)	D107V	probably benign	Het
Herc2	C	T	7: 55,857,510 (GRCm39)	T4031M	probably damaging	Het
Iffo2	G	A	4: 139,333,769 (GRCm39)	A282T	probably damaging	Het
Ifi44	T	G	3: 151,451,276 (GRCm39)		probably null	Het
Igkv4-53	C	T	6: 69,625,915 (GRCm39)	R62H	possibly damaging	Het
Lrp11	A	C	10: 7,474,454 (GRCm39)		probably null	Het
Lrp4	A	G	2: 91,338,833 (GRCm39)	T1755A	probably benign	Het
Mcm3ap	A	T	10: 76,336,934 (GRCm39)	K1316M	probably damaging	Het
Mctp1	T	G	13: 76,971,082 (GRCm39)		probably null	Het
Mroh5	A	T	15: 73,662,630 (GRCm39)	I396N	probably damaging	Het
Mrps5	T	A	2: 127,443,305 (GRCm39)	H294Q	probably damaging	Het
Muc16	A	T	9: 18,569,985 (GRCm39)	S845T	unknown	Het
Mycbpap	A	T	11: 94,398,557 (GRCm39)	V474E	probably damaging	Het
Mzt2	G	C	16: 15,666,551 (GRCm39)	S122W	probably benign	Het
Neb	T	C	2: 52,146,802 (GRCm39)	I2821V	probably benign	Het
Ngef	A	T	1: 87,415,622 (GRCm39)	D347E	probably damaging	Het
Nlrp14	T	C	7: 106,781,646 (GRCm39)	V281A	probably benign	Het
Obscn	A	T	11: 58,888,864 (GRCm39)	Y7597N	unknown	Het
Or4k47	T	C	2: 111,451,520 (GRCm39)	R300G	possibly damaging	Het
Patj	G	T	4: 98,344,394 (GRCm39)	G569W	probably damaging	Het
Pdzrn4	A	T	15: 92,655,562 (GRCm39)	E485V	probably damaging	Het
Phf2	T	A	13: 48,973,583 (GRCm39)	T361S	unknown	Het
Pik3r6	A	G	11: 68,434,455 (GRCm39)	E552G	probably damaging	Het
Pitx2	A	G	3: 129,009,521 (GRCm39)	T147A	probably benign	Het
Pkmyt1	G	A	17: 23,953,167 (GRCm39)	G241D	probably damaging	Het
Pola2	A	T	19: 6,003,802 (GRCm39)	V191D	possibly damaging	Het
Ralgapb	T	A	2: 158,291,367 (GRCm39)		probably null	Het
Rapgef4	T	C	2: 71,811,661 (GRCm39)	S11P	probably benign	Het
Rnf10	G	A	5: 115,395,136 (GRCm39)	R151C	probably damaging	Het
Rpl34	G	A	3: 130,522,716 (GRCm39)	P50L	probably benign	Het
Rptn	C	G	3: 93,305,437 (GRCm39)	H923Q	possibly damaging	Het
Sbno2	A	T	10: 79,895,850 (GRCm39)	L977Q	probably damaging	Het
Sec14l3	G	A	11: 4,025,566 (GRCm39)		probably null	Het
Serping1	A	T	2: 84,600,612 (GRCm39)	N243K	possibly damaging	Het
Slco2b1	T	A	7: 99,334,779 (GRCm39)	I231F	probably damaging	Het
Spag8	A	G	4: 43,652,458 (GRCm39)	F294S	probably damaging	Het
Speer4f1	G	A	5: 17,684,493 (GRCm39)	A174T	probably damaging	Het
Spred3	T	C	7: 28,862,402 (GRCm39)	D147G	probably benign	Het
Stard9	A	G	2: 120,527,241 (GRCm39)	D1166G	probably damaging	Het
Svep1	G	T	4: 58,104,536 (GRCm39)	T1229K	possibly damaging	Het
Tanc1	T	A	2: 59,669,305 (GRCm39)		probably null	Het
Tmem232	T	C	17: 65,737,800 (GRCm39)	Y420C	probably damaging	Het
Tubd1	A	T	11: 86,448,619 (GRCm39)	M311L	probably benign	Het
Tulp3	G	A	6: 128,332,703 (GRCm39)		probably null	Het
Usp42	T	C	5: 143,702,942 (GRCm39)	T560A	possibly damaging	Het
Vmn1r170	A	T	7: 23,305,934 (GRCm39)	Y112F	probably damaging	Het
Vmn2r4	A	T	3: 64,322,699 (GRCm39)	C7S	probably benign	Het
Wrn	A	G	8: 33,774,682 (GRCm39)	M652T	probably benign	Het
Zfp142	T	C	1: 74,609,667 (GRCm39)	E1376G	probably damaging	Het
Zfp709	TCGACG	TCG	8: 72,644,552 (GRCm39)		probably benign	Het

Other mutations in Wsb1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01760:Wsb1	APN	11	79,132,867 (GRCm39)	missense	probably damaging	1.00
IGL02352:Wsb1	APN	11	79,141,838 (GRCm39)	missense	probably damaging	1.00
IGL02359:Wsb1	APN	11	79,141,838 (GRCm39)	missense	probably damaging	1.00
IGL03218:Wsb1	APN	11	79,139,324 (GRCm39)	missense	probably damaging	0.97
R0488:Wsb1	UTSW	11	79,135,326 (GRCm39)	missense	probably damaging	1.00
R1051:Wsb1	UTSW	11	79,137,059 (GRCm39)	missense	probably damaging	1.00
R1612:Wsb1	UTSW	11	79,139,411 (GRCm39)	missense	probably benign	0.31
R2202:Wsb1	UTSW	11	79,131,212 (GRCm39)	missense	probably benign
R2449:Wsb1	UTSW	11	79,131,178 (GRCm39)	missense	probably benign
R4782:Wsb1	UTSW	11	79,131,199 (GRCm39)	missense	probably benign	0.44
R4805:Wsb1	UTSW	11	79,131,217 (GRCm39)	missense	possibly damaging	0.95
R4932:Wsb1	UTSW	11	79,141,826 (GRCm39)	missense	probably damaging	0.96
R5458:Wsb1	UTSW	11	79,139,262 (GRCm39)	missense	probably damaging	1.00
R6032:Wsb1	UTSW	11	79,131,025 (GRCm39)	unclassified	probably benign
R6032:Wsb1	UTSW	11	79,131,025 (GRCm39)	unclassified	probably benign
R6140:Wsb1	UTSW	11	79,132,444 (GRCm39)	missense	probably damaging	0.98
R6498:Wsb1	UTSW	11	79,139,315 (GRCm39)	missense	probably damaging	1.00
R6545:Wsb1	UTSW	11	79,141,881 (GRCm39)	missense	probably damaging	1.00
R6608:Wsb1	UTSW	11	79,131,188 (GRCm39)	missense	probably benign	0.30
R7142:Wsb1	UTSW	11	79,141,814 (GRCm39)	missense	probably benign	0.01
R7339:Wsb1	UTSW	11	79,131,184 (GRCm39)	missense	probably damaging	0.97
R7361:Wsb1	UTSW	11	79,131,623 (GRCm39)	critical splice acceptor site	probably null
R8338:Wsb1	UTSW	11	79,137,103 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGACCCAAACCTGCTTTGC -3'
(R):5'- GGGTTCTCAGCCAACAATAGTTTTC -3'

Sequencing Primer
(F):5'- CCAAACCTGCTTTGCATATTTTATC -3'
(R):5'- CTCAGCCAACAATAGTTTTCATGAG -3'

Posted On

2018-02-27