Incidental Mutation 'IGL01102:Bloc1s2-ps'
ID 50513
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Bloc1s2-ps
Ensembl Gene ENSMUSG00000025201
Gene Name biogenesis of lysosomal organelles complex-1, subunit 2, pseudogene
Synonyms Bloc1s2b
Accession Numbers
Essential gene? Not available question?
Stock # IGL01102
Quality Score
Status
Chromosome 2
Chromosomal Location 52509766-52510197 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 52509914 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Alanine to Valine at position 50 (A50V)
Gene Model predicted gene model for transcript(s): [ENSMUST00000078324] [ENSMUST00000178799]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000026219
AA Change: A50V

PolyPhen 2 Score 0.020 (Sensitivity: 0.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000026219
Gene: ENSMUSG00000025201
AA Change: A50V

DomainStartEndE-ValueType
low complexity region 22 36 N/A INTRINSIC
Pfam:BLOC1_2 43 138 6.9e-39 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000078324
SMART Domains Protein: ENSMUSP00000077438
Gene: ENSMUSG00000017412

DomainStartEndE-ValueType
Pfam:VGCC_beta4Aa_N 49 90 5.4e-27 PFAM
SH3 94 159 4.96e-2 SMART
low complexity region 172 189 N/A INTRINSIC
low complexity region 193 206 N/A INTRINSIC
GuKc 217 398 3.46e-37 SMART
low complexity region 465 481 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000178799
SMART Domains Protein: ENSMUSP00000136811
Gene: ENSMUSG00000017412

DomainStartEndE-ValueType
Pfam:VGCC_beta4Aa_N 49 90 1.3e-24 PFAM
SH3 94 159 4.96e-2 SMART
low complexity region 172 189 N/A INTRINSIC
GuKc 217 398 3.46e-37 SMART
low complexity region 465 481 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000183232
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca2 C T 2: 25,323,968 (GRCm39) probably benign Het
Bltp3b T C 10: 89,627,240 (GRCm39) L435P probably benign Het
Col4a3 A G 1: 82,647,441 (GRCm39) D455G unknown Het
Col4a3 A G 1: 82,647,976 (GRCm39) I496V unknown Het
Coro1c A T 5: 113,987,675 (GRCm39) M222K probably benign Het
Dnah5 T A 15: 28,410,149 (GRCm39) probably null Het
Emc4 C A 2: 112,197,871 (GRCm39) probably benign Het
Fcer2a T C 8: 3,738,842 (GRCm39) D32G possibly damaging Het
Fhip1a A G 3: 85,572,808 (GRCm39) probably benign Het
Garnl3 T C 2: 32,896,828 (GRCm39) K559E probably damaging Het
Gckr T C 5: 31,466,381 (GRCm39) L452P probably damaging Het
Gm4841 A G 18: 60,403,124 (GRCm39) V323A probably damaging Het
Gm6902 T A 7: 22,973,087 (GRCm39) I147L probably benign Het
Gpr75 T C 11: 30,841,755 (GRCm39) V220A probably benign Het
Hdac6 A G X: 7,813,237 (GRCm39) S42P probably benign Het
Hdhd2 A G 18: 77,044,607 (GRCm39) N128S probably damaging Het
Hsd3b2 G T 3: 98,618,995 (GRCm39) R317S probably damaging Het
Il23r T A 6: 67,400,909 (GRCm39) I474F probably damaging Het
Itga5 T C 15: 103,255,102 (GRCm39) Y954C probably benign Het
Itgam T C 7: 127,679,445 (GRCm39) F196L possibly damaging Het
Mapkbp1 T C 2: 119,852,339 (GRCm39) V957A possibly damaging Het
Mblac2 T C 13: 81,898,125 (GRCm39) M167T probably damaging Het
Mterf4 C T 1: 93,232,812 (GRCm39) R13H possibly damaging Het
Npffr1 T G 10: 61,449,987 (GRCm39) V87G probably damaging Het
Or5h18 G A 16: 58,848,192 (GRCm39) P26L probably benign Het
Or6c76b A G 10: 129,692,497 (GRCm39) I37V probably benign Het
Phldb2 A G 16: 45,645,423 (GRCm39) L386P probably damaging Het
Ppp1r13b A G 12: 111,799,653 (GRCm39) I708T probably benign Het
Pramel31 A G 4: 144,090,195 (GRCm39) I412V probably benign Het
Ramp2 T A 11: 101,138,453 (GRCm39) Y85N probably benign Het
Rnf217 A G 10: 31,484,499 (GRCm39) Y228H probably damaging Het
Rock1 T G 18: 10,080,502 (GRCm39) D1014A probably benign Het
Scyl3 T A 1: 163,762,338 (GRCm39) C101* probably null Het
Sema6b G T 17: 56,439,761 (GRCm39) L27I possibly damaging Het
Slc10a5 A G 3: 10,400,369 (GRCm39) V97A probably benign Het
Strc C A 2: 121,195,541 (GRCm39) R1636L probably benign Het
Tm9sf1 T A 14: 55,880,224 (GRCm39) T58S probably damaging Het
Tmem106c T C 15: 97,864,825 (GRCm39) Y85H probably damaging Het
Vmn2r9 A G 5: 108,990,811 (GRCm39) probably null Het
Vps13a A G 19: 16,628,781 (GRCm39) probably null Het
Zfp976 A T 7: 42,263,333 (GRCm39) L168* probably null Het
Posted On 2013-06-21