Mutagenetix > Incidental Mutation

Incidental Mutation 'R6249:Or13p3'

505834

Institutional Source

Beutler Lab

Gene Symbol

Or13p3

Ensembl Gene

ENSMUSG00000046790

Gene Name

olfactory receptor family 13 subfamily P member 3

Synonyms

GA_x6K02T2QD9B-18838170-18837232, MOR258-1, Olfr1341

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.078) question?

Stock #

R6249 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

118566606-118567544 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 118566910 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 102 (Y102C)

Ref Sequence

ENSEMBL: ENSMUSP00000149466 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000061215] [ENSMUST00000214131] [ENSMUST00000215117]

AlphaFold

Q7TQV4

Predicted Effect

probably damaging
Transcript: ENSMUST00000061215
AA Change: Y102C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000095523
Gene: ENSMUSG00000046790
AA Change: Y102C

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	306	8.4e-54	PFAM
Pfam:7TM_GPCR_Srsx	35	304	1.5e-7	PFAM
Pfam:7tm_1	41	290	1.7e-24	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000214131
AA Change: Y102C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

Predicted Effect

probably damaging
Transcript: ENSMUST00000215117
AA Change: Y102C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 98.5%
20x: 95.8%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 66 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110004F10Rik	A	T	7: 115,702,505 (GRCm39)	S90C	probably damaging	Het
Abca9	T	C	11: 110,036,453 (GRCm39)	D552G	probably benign	Het
Adgrb3	A	G	1: 25,471,639 (GRCm39)	L502P	probably damaging	Het
Agmo	T	C	12: 37,293,837 (GRCm39)		probably null	Het
Ank3	A	G	10: 69,658,906 (GRCm39)		probably null	Het
Apol11b	G	T	15: 77,519,537 (GRCm39)	T181K	probably benign	Het
Arap2	G	T	5: 62,803,536 (GRCm39)	H1244N	probably damaging	Het
Arid1b	A	T	17: 5,329,636 (GRCm39)	M838L	possibly damaging	Het
Aste1	G	A	9: 105,273,816 (GRCm39)	V19I	probably benign	Het
B3gnt3	A	T	8: 72,145,306 (GRCm39)	M354K	probably damaging	Het
Calcr	A	T	6: 3,692,711 (GRCm39)	M381K	possibly damaging	Het
Ccdc63	A	C	5: 122,263,062 (GRCm39)	L160W	probably benign	Het
Cerkl	A	G	2: 79,199,122 (GRCm39)	L156P	probably damaging	Het
Csnk2a1-ps3	A	G	1: 156,352,800 (GRCm39)	M334V	probably benign	Het
Dab1	C	T	4: 104,588,948 (GRCm39)	A524V	probably benign	Het
Ddb1	C	A	19: 10,583,084 (GRCm39)	Y5*	probably null	Het
Fignl2	T	C	15: 100,952,060 (GRCm39)	E74G	possibly damaging	Het
Glb1l2	C	T	9: 26,676,850 (GRCm39)		probably benign	Het
Gm16503	A	G	4: 147,625,508 (GRCm39)	M1V	probably null	Het
Gm2696	A	C	10: 77,630,646 (GRCm39)		probably benign	Het
Gm45844	A	G	7: 7,243,092 (GRCm39)	S20P	probably benign	Het
Gm7579	C	T	7: 141,765,743 (GRCm39)	P50S	unknown	Het
Idh1	A	G	1: 65,205,378 (GRCm39)	S196P	probably damaging	Het
Il1rap	T	C	16: 26,511,598 (GRCm39)	V214A	possibly damaging	Het
Kctd17	C	G	15: 78,314,239 (GRCm39)		probably null	Het
Lama1	G	T	17: 68,105,599 (GRCm39)	V2036L	probably benign	Het
Lars1	G	T	18: 42,390,271 (GRCm39)		probably null	Het
Mdn1	T	A	4: 32,708,484 (GRCm39)	V1670E	possibly damaging	Het
Mtmr7	A	T	8: 41,034,524 (GRCm39)	I266N	probably damaging	Het
Ncapd3	GGCTGCTGCTGCTGCTGCTGCTG	GGCTGCTGCTGCTGCTGCTG	9: 26,999,349 (GRCm39)		probably benign	Het
Nckap5	T	C	1: 125,952,667 (GRCm39)	E1295G	probably benign	Het
Nrxn3	T	A	12: 89,221,448 (GRCm39)	V409D	probably damaging	Het
Or2a5	G	T	6: 42,874,238 (GRCm39)	L284F	probably damaging	Het
Or2aj4	T	A	16: 19,384,725 (GRCm39)	N303Y	probably damaging	Het
Or51q1	A	T	7: 103,628,818 (GRCm39)	S140C	possibly damaging	Het
Or5h22	T	C	16: 58,894,795 (GRCm39)	Y216C	probably damaging	Het
Or8b44	T	G	9: 38,410,880 (GRCm39)	I305R	unknown	Het
Pcdha4	T	A	18: 37,086,729 (GRCm39)	V304E	probably damaging	Het
Pde6c	T	C	19: 38,147,008 (GRCm39)		probably null	Het
Pebp4	A	T	14: 70,297,099 (GRCm39)	T213S	possibly damaging	Het
Phf2	C	A	13: 48,959,348 (GRCm39)	R886L	unknown	Het
Pik3ca	A	T	3: 32,515,712 (GRCm39)	H795L	probably damaging	Het
Pisd	G	T	5: 32,896,188 (GRCm39)	T379N	probably damaging	Het
Pld2	T	C	11: 70,446,196 (GRCm39)	L732P	probably damaging	Het
Pskh1	A	G	8: 106,639,617 (GRCm39)	D99G	possibly damaging	Het
Rest	A	G	5: 77,429,071 (GRCm39)	T497A	probably benign	Het
Rps24	C	T	14: 24,543,530 (GRCm39)	T108M	possibly damaging	Het
Rtel1	C	T	2: 180,993,475 (GRCm39)	R566C	probably damaging	Het
Scyl2	A	G	10: 89,493,719 (GRCm39)	S350P	possibly damaging	Het
Slc38a7	G	T	8: 96,564,302 (GRCm39)		probably null	Het
Sox5	A	G	6: 143,779,009 (GRCm39)	I674T	probably benign	Het
Spata31f1a	A	T	4: 42,850,528 (GRCm39)	W543R	probably benign	Het
Surf4	C	A	2: 26,816,899 (GRCm39)	E39D	probably damaging	Het
Tas2r144	T	A	6: 42,192,291 (GRCm39)	Y10*	probably null	Het
Thbs4	C	T	13: 92,911,215 (GRCm39)	G323R	probably damaging	Het
Top2b	A	G	14: 16,399,006 (GRCm38)	Y542C	probably damaging	Het
Trim61	A	G	8: 65,467,108 (GRCm39)	V51A	probably benign	Het
Tyrp1	T	A	4: 80,769,009 (GRCm39)	I501N	possibly damaging	Het
U2surp	C	T	9: 95,382,869 (GRCm39)	D32N	probably benign	Het
Ush1c	T	C	7: 45,864,383 (GRCm39)	Y411C	probably damaging	Het
Vwa7	G	A	17: 35,242,365 (GRCm39)	V490I	probably benign	Het
Xylt1	G	T	7: 117,266,528 (GRCm39)	A849S	probably benign	Het
Ythdc1	T	A	5: 86,979,815 (GRCm39)	N599K	possibly damaging	Het
Zbtb38	T	A	9: 96,568,045 (GRCm39)	Y1013F	probably damaging	Het
Zfp709	TCGACG	TCG	8: 72,644,552 (GRCm39)		probably benign	Het
Zswim9	T	C	7: 12,994,903 (GRCm39)	S418G	probably damaging	Het

Other mutations in Or13p3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00983:Or13p3	APN	4	118,567,119 (GRCm39)	missense	probably damaging	1.00
IGL02699:Or13p3	APN	4	118,567,395 (GRCm39)	missense	probably benign	0.36
IGL02798:Or13p3	APN	4	118,566,696 (GRCm39)	missense	probably damaging	0.97
IGL03271:Or13p3	APN	4	118,566,982 (GRCm39)	missense	probably damaging	0.99
R0085:Or13p3	UTSW	4	118,567,078 (GRCm39)	missense	probably benign	0.18
R0355:Or13p3	UTSW	4	118,566,808 (GRCm39)	missense	probably benign	0.06
R1134:Or13p3	UTSW	4	118,567,476 (GRCm39)	missense	probably damaging	0.97
R1561:Or13p3	UTSW	4	118,566,751 (GRCm39)	missense	probably damaging	0.99
R1574:Or13p3	UTSW	4	118,566,751 (GRCm39)	missense	probably damaging	0.99
R2167:Or13p3	UTSW	4	118,567,252 (GRCm39)	missense	probably benign	0.18
R2182:Or13p3	UTSW	4	118,567,542 (GRCm39)	makesense	probably null
R2237:Or13p3	UTSW	4	118,567,192 (GRCm39)	missense	probably damaging	1.00
R3775:Or13p3	UTSW	4	118,567,351 (GRCm39)	missense	probably damaging	1.00
R6000:Or13p3	UTSW	4	118,567,441 (GRCm39)	missense	probably damaging	1.00
R6331:Or13p3	UTSW	4	118,567,144 (GRCm39)	missense	probably benign	0.34
R6527:Or13p3	UTSW	4	118,567,045 (GRCm39)	missense	possibly damaging	0.56
R7795:Or13p3	UTSW	4	118,566,855 (GRCm39)	missense	possibly damaging	0.94
R8752:Or13p3	UTSW	4	118,567,083 (GRCm39)	missense	probably damaging	1.00
R9281:Or13p3	UTSW	4	118,566,592 (GRCm39)	start gained	probably benign
R9366:Or13p3	UTSW	4	118,566,831 (GRCm39)	missense	probably damaging	0.98
R9389:Or13p3	UTSW	4	118,567,353 (GRCm39)	missense	probably benign	0.01
R9518:Or13p3	UTSW	4	118,567,120 (GRCm39)	missense	probably damaging	0.98
X0063:Or13p3	UTSW	4	118,566,952 (GRCm39)	missense	probably damaging	1.00
Z1088:Or13p3	UTSW	4	118,567,423 (GRCm39)	missense	probably benign	0.00
Z1177:Or13p3	UTSW	4	118,567,355 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- TGGGCAATGGCTTGATCTTC -3'
(R):5'- TCTTGTTGGGGCCACAGTAG -3'

Sequencing Primer
(F):5'- GGCAATGGCTTGATCTTCATCCTC -3'
(R):5'- CGCATGGCAAAGATGGTATAGAC -3'

Posted On

2018-02-28