Mutagenetix > Incidental Mutation

Incidental Mutation 'R6302:Vmn2r83'

509290

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r83

Ensembl Gene

ENSMUSG00000091381

Gene Name

vomeronasal 2, receptor 83

Synonyms

EG625029

MMRRC Submission

044467-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.124) question?

Stock #

R6302 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

79304792-79327988 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 79304837 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Proline at position 16 (T16P)

Ref Sequence

ENSEMBL: ENSMUSP00000131426 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000167976]

AlphaFold

E9Q0G7

Predicted Effect

possibly damaging
Transcript: ENSMUST00000167976
AA Change: T16P

PolyPhen 2 Score 0.947 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000131426
Gene: ENSMUSG00000091381
AA Change: T16P

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
Pfam:ANF_receptor	79	473	1.5e-33	PFAM
Pfam:NCD3G	516	569	6.2e-22	PFAM
Pfam:7tm_3	602	837	8.1e-52	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl4fm4	G	T	4: 144,396,760 (GRCm39)	S324*	probably null	Het
Actl11	T	G	9: 107,806,772 (GRCm39)	V365G	probably benign	Het
Adgrg6	T	A	10: 14,317,227 (GRCm39)	D531V	probably benign	Het
Ankrd11	A	G	8: 123,616,728 (GRCm39)	S2354P	probably benign	Het
Ano9	A	T	7: 140,684,221 (GRCm39)	W514R	probably damaging	Het
Arfgef3	A	T	10: 18,528,589 (GRCm39)	V266E	probably damaging	Het
Bahcc1	T	C	11: 120,167,634 (GRCm39)	I1345T	probably damaging	Het
Bpifb4	G	A	2: 153,801,587 (GRCm39)	M355I	probably benign	Het
Catsperb	T	C	12: 101,554,402 (GRCm39)	S699P	possibly damaging	Het
Cdh23	T	G	10: 60,140,872 (GRCm39)	I3161L	possibly damaging	Het
Chd3	T	C	11: 69,244,604 (GRCm39)	T1257A	probably damaging	Het
Cnnm4	C	T	1: 36,539,036 (GRCm39)	T638I	probably benign	Het
Cspg4b	A	G	13: 113,504,646 (GRCm39)	D1925G	probably damaging	Het
Cyp26c1	A	G	19: 37,674,936 (GRCm39)	T86A	probably damaging	Het
Cyp3a63-ps	A	G	5: 145,564,847 (GRCm39)		noncoding transcript	Het
Dnah14	T	A	1: 181,428,771 (GRCm39)	I259N	possibly damaging	Het
Dnah17	T	C	11: 118,019,981 (GRCm39)	D22G	probably benign	Het
Epn2	T	G	11: 61,437,312 (GRCm39)	T87P	probably damaging	Het
Fbxl18	A	G	5: 142,874,578 (GRCm39)	L81P	probably damaging	Het
Gas1	A	T	13: 60,323,970 (GRCm39)	D221E	probably damaging	Het
Gm8356	T	C	14: 17,691,275 (GRCm39)	Y130C	probably damaging	Het
Gpr151	T	G	18: 42,712,459 (GRCm39)	K73T	probably damaging	Het
Helq	A	C	5: 100,946,305 (GRCm39)	V12G	probably damaging	Het
Inpp4b	A	G	8: 82,494,806 (GRCm39)	T74A	probably benign	Het
Kirrel3	G	A	9: 34,919,045 (GRCm39)	V234I	probably damaging	Het
Kxd1	T	A	8: 70,972,713 (GRCm39)		probably null	Het
Lif	T	C	11: 4,218,924 (GRCm39)	Y68H	probably damaging	Het
Map6	A	G	7: 98,985,314 (GRCm39)	Q406R	probably damaging	Het
Mcoln3	A	T	3: 145,830,527 (GRCm39)	M86L	probably benign	Het
Mei1	T	A	15: 81,987,439 (GRCm39)	Y834*	probably null	Het
Mroh1	T	C	15: 76,320,319 (GRCm39)		probably null	Het
Myo15b	T	C	11: 115,777,065 (GRCm39)	I2319T	possibly damaging	Het
Myo7b	T	G	18: 32,127,439 (GRCm39)	D621A	probably damaging	Het
Naip5	C	T	13: 100,359,674 (GRCm39)	A521T	possibly damaging	Het
Nek7	T	C	1: 138,426,351 (GRCm39)	D254G	probably damaging	Het
Nsd2	A	G	5: 34,024,921 (GRCm39)	R560G	possibly damaging	Het
Or2t46	T	C	11: 58,472,464 (GRCm39)	F265L	probably benign	Het
Or52x1	A	T	7: 104,852,926 (GRCm39)	L208H	probably damaging	Het
Pbx1	T	A	1: 168,018,910 (GRCm39)	T312S	probably benign	Het
Peg10	GAT	GATCAT	6: 4,756,449 (GRCm39)		probably benign	Het
Pitrm1	A	G	13: 6,610,097 (GRCm39)	S390G	probably damaging	Het
Plcxd3	C	T	15: 4,546,239 (GRCm39)	T81M	probably damaging	Het
Pmf1	C	T	3: 88,307,017 (GRCm39)		probably null	Het
Rabep1	T	C	11: 70,825,947 (GRCm39)	V739A	probably damaging	Het
Rex2	A	G	4: 147,142,451 (GRCm39)	D313G	possibly damaging	Het
Rpia	C	T	6: 70,750,485 (GRCm39)	V216I	probably damaging	Het
Rsf1	CG	CGACGGCGGTG	7: 97,229,115 (GRCm39)		probably benign	Het
Sec13	T	A	6: 113,712,167 (GRCm39)	H56L	probably damaging	Het
Sec16a	A	T	2: 26,315,817 (GRCm39)	V1733D	probably damaging	Het
Sim2	G	A	16: 93,898,089 (GRCm39)	A108T	probably damaging	Het
Slc27a5	T	C	7: 12,722,479 (GRCm39)	D665G	probably damaging	Het
Slc38a6	T	A	12: 73,383,849 (GRCm39)	V180E	probably damaging	Het
Smarcad1	T	G	6: 65,052,122 (GRCm39)	N38K	possibly damaging	Het
Spem2	T	C	11: 69,709,091 (GRCm39)	T45A	possibly damaging	Het
Svil	T	C	18: 5,057,432 (GRCm39)	S714P	probably benign	Het
Taar7b	T	A	10: 23,876,158 (GRCm39)	S108T	possibly damaging	Het
Tbl3	T	C	17: 24,923,645 (GRCm39)	K256E	probably benign	Het
Tcam1	T	G	11: 106,177,276 (GRCm39)	C423G	probably damaging	Het
Trpm4	A	T	7: 44,977,143 (GRCm39)		probably null	Het
Ttyh2	T	C	11: 114,592,662 (GRCm39)	C231R	probably damaging	Het
Ugt3a1	C	T	15: 9,365,397 (GRCm39)	P337S	probably damaging	Het
Vps52	T	C	17: 34,182,189 (GRCm39)	F589S	probably damaging	Het
Xkr4	T	C	1: 3,286,961 (GRCm39)	T410A	probably damaging	Het
Xkr9	A	G	1: 13,742,726 (GRCm39)	T4A	probably damaging	Het
Yars2	T	C	16: 16,122,438 (GRCm39)	L268P	probably damaging	Het
Zbtb41	C	A	1: 139,357,027 (GRCm39)	N427K	possibly damaging	Het
Zeb2	T	C	2: 44,887,771 (GRCm39)	T414A	probably benign	Het

Other mutations in Vmn2r83

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00226:Vmn2r83	APN	10	79,314,805 (GRCm39)	missense	probably damaging	1.00
IGL01096:Vmn2r83	APN	10	79,313,662 (GRCm39)	missense	probably damaging	1.00
IGL01542:Vmn2r83	APN	10	79,314,846 (GRCm39)	missense	probably benign	0.30
IGL01803:Vmn2r83	APN	10	79,304,894 (GRCm39)	missense	probably benign	0.01
IGL02110:Vmn2r83	APN	10	79,327,534 (GRCm39)	missense	possibly damaging	0.82
IGL02347:Vmn2r83	APN	10	79,316,067 (GRCm39)	missense	possibly damaging	0.75
IGL02417:Vmn2r83	APN	10	79,314,881 (GRCm39)	missense	probably benign	0.00
IGL02544:Vmn2r83	APN	10	79,317,293 (GRCm39)	splice site	probably benign
IGL02683:Vmn2r83	APN	10	79,327,115 (GRCm39)	missense	probably benign
IGL02976:Vmn2r83	APN	10	79,304,832 (GRCm39)	missense	probably benign	0.00
PIT4378001:Vmn2r83	UTSW	10	79,304,849 (GRCm39)	missense	probably benign	0.00
PIT4468001:Vmn2r83	UTSW	10	79,313,884 (GRCm39)	missense	probably damaging	1.00
R0092:Vmn2r83	UTSW	10	79,327,798 (GRCm39)	missense	probably damaging	1.00
R1391:Vmn2r83	UTSW	10	79,314,931 (GRCm39)	missense	probably damaging	0.96
R1539:Vmn2r83	UTSW	10	79,327,759 (GRCm39)	missense	probably damaging	1.00
R1575:Vmn2r83	UTSW	10	79,314,956 (GRCm39)	missense	probably damaging	0.98
R2033:Vmn2r83	UTSW	10	79,327,653 (GRCm39)	missense	probably benign	0.03
R3916:Vmn2r83	UTSW	10	79,314,744 (GRCm39)	missense	probably benign	0.01
R3967:Vmn2r83	UTSW	10	79,327,154 (GRCm39)	missense	probably benign	0.00
R4840:Vmn2r83	UTSW	10	79,313,682 (GRCm39)	missense	possibly damaging	0.73
R5063:Vmn2r83	UTSW	10	79,314,921 (GRCm39)	missense	probably benign	0.04
R5630:Vmn2r83	UTSW	10	79,327,785 (GRCm39)	missense	possibly damaging	0.94
R5707:Vmn2r83	UTSW	10	79,327,183 (GRCm39)	missense	possibly damaging	0.53
R5980:Vmn2r83	UTSW	10	79,314,626 (GRCm39)	missense	probably benign	0.04
R6294:Vmn2r83	UTSW	10	79,313,688 (GRCm39)	missense	probably damaging	0.99
R6769:Vmn2r83	UTSW	10	79,313,856 (GRCm39)	missense	probably damaging	1.00
R6986:Vmn2r83	UTSW	10	79,316,093 (GRCm39)	missense	probably benign
R7221:Vmn2r83	UTSW	10	79,316,001 (GRCm39)	missense	probably benign	0.02
R7376:Vmn2r83	UTSW	10	79,314,790 (GRCm39)	missense	probably benign	0.00
R7431:Vmn2r83	UTSW	10	79,327,306 (GRCm39)	missense	probably damaging	0.99
R7501:Vmn2r83	UTSW	10	79,327,771 (GRCm39)	missense	probably damaging	0.98
R7526:Vmn2r83	UTSW	10	79,327,392 (GRCm39)	missense	probably damaging	1.00
R7663:Vmn2r83	UTSW	10	79,314,956 (GRCm39)	missense	probably damaging	0.98
R7881:Vmn2r83	UTSW	10	79,314,261 (GRCm39)	missense	probably benign	0.01
R7939:Vmn2r83	UTSW	10	79,314,651 (GRCm39)	missense	probably damaging	1.00
R8314:Vmn2r83	UTSW	10	79,317,313 (GRCm39)	missense	possibly damaging	0.76
R8364:Vmn2r83	UTSW	10	79,316,037 (GRCm39)	missense	probably benign	0.12
R8802:Vmn2r83	UTSW	10	79,314,261 (GRCm39)	missense	probably benign	0.01
R8947:Vmn2r83	UTSW	10	79,304,873 (GRCm39)	missense	probably benign	0.00
R8969:Vmn2r83	UTSW	10	79,313,853 (GRCm39)	missense	probably benign	0.15
R8983:Vmn2r83	UTSW	10	79,327,360 (GRCm39)	missense	probably damaging	1.00
R9018:Vmn2r83	UTSW	10	79,316,020 (GRCm39)	missense	probably damaging	1.00
R9082:Vmn2r83	UTSW	10	79,304,894 (GRCm39)	missense	probably benign	0.00
R9390:Vmn2r83	UTSW	10	79,317,322 (GRCm39)	nonsense	probably null
X0026:Vmn2r83	UTSW	10	79,314,486 (GRCm39)	missense	probably benign
X0026:Vmn2r83	UTSW	10	79,304,849 (GRCm39)	missense	probably benign	0.00
Z1176:Vmn2r83	UTSW	10	79,314,756 (GRCm39)	missense	possibly damaging	0.74

Predicted Primers

PCR Primer
(F):5'- GTGACATACTCAGTCATCAAGTCAAC -3'
(R):5'- TCCACACTTAACCTAGGGAACATG -3'

Sequencing Primer
(F):5'- AGTCAACAAAAGTATACTGAAAGCC -3'
(R):5'- CACTTACAGGCAATGACTT -3'

Posted On

2018-04-02