Mutagenetix > Incidental Mutation

Incidental Mutation 'R6324:Nufip2'

510664

Institutional Source

Beutler Lab

Gene Symbol

Nufip2

Ensembl Gene

ENSMUSG00000037857

Gene Name

nuclear FMR1 interacting protein 2

Synonyms

1110001M19Rik, 9530056D24Rik

MMRRC Submission

044478-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.955) question?

Stock #

R6324 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

77576566-77608792 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 77582487 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 134 (T134A)

Ref Sequence

ENSEMBL: ENSMUSP00000137922 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000100802] [ENSMUST00000181023]

AlphaFold

Q5F2E7

Predicted Effect

probably benign
Transcript: ENSMUST00000100802
AA Change: T134A

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000098365
Gene: ENSMUSG00000037857
AA Change: T134A

Domain	Start	End	E-Value	Type
low complexity region	7	61	N/A	INTRINSIC
Pfam:NUFIP2	90	685	2.4e-292	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000126942

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000155238

Predicted Effect

probably benign
Transcript: ENSMUST00000181023
AA Change: T134A

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000137922
Gene: ENSMUSG00000037857
AA Change: T134A

Domain	Start	End	E-Value	Type
low complexity region	7	61	N/A	INTRINSIC
Pfam:NUFIP2	89	681	7e-293	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.7%

Validation Efficiency

96% (47/49)

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arhgef4	G	A	1: 34,762,558 (GRCm39)	A605T	unknown	Het
Atp13a3	A	G	16: 30,151,103 (GRCm39)	V1069A	possibly damaging	Het
Atp1a2	C	G	1: 172,116,903 (GRCm39)	R238P	probably damaging	Het
Baz2b	A	G	2: 59,737,292 (GRCm39)	S1877P	probably damaging	Het
Ccdc27	A	T	4: 154,120,648 (GRCm39)	S383T	probably benign	Het
Cr1l	A	G	1: 194,793,430 (GRCm39)	V377A	probably benign	Het
Dazap1	A	G	10: 80,113,494 (GRCm39)	E130G	probably benign	Het
Dchs1	G	T	7: 105,414,145 (GRCm39)	A890E	probably benign	Het
Dock10	G	A	1: 80,482,893 (GRCm39)	T2143I	probably benign	Het
Eif3j1	A	G	2: 121,871,659 (GRCm39)	D60G	probably benign	Het
Enah	A	G	1: 181,746,136 (GRCm39)	S382P	probably damaging	Het
Fam171b	A	T	2: 83,709,608 (GRCm39)	K427*	probably null	Het
Fmn2	A	T	1: 174,440,119 (GRCm39)	I1179L	possibly damaging	Het
Focad	C	T	4: 88,319,305 (GRCm39)	R1505*	probably null	Het
Frem1	T	C	4: 82,901,574 (GRCm39)	T985A	probably benign	Het
Gm3404	A	T	5: 146,464,917 (GRCm39)	Q219L	possibly damaging	Het
Gm5592	A	C	7: 40,935,959 (GRCm39)	S154R	probably damaging	Het
Gpn3	C	T	5: 122,510,638 (GRCm39)		probably benign	Het
Gpr158	A	G	2: 21,815,365 (GRCm39)	E586G	probably damaging	Het
Gstp2	A	T	19: 4,090,499 (GRCm39)	I162N	probably benign	Het
Lin7a	T	A	10: 107,216,076 (GRCm39)		probably null	Het
Loxl4	G	A	19: 42,583,817 (GRCm39)	L745F	probably benign	Het
Ms4a19	T	A	19: 11,140,811 (GRCm39)	M3L	probably benign	Het
Mybpc1	A	G	10: 88,404,481 (GRCm39)	I172T	possibly damaging	Het
Nalcn	A	G	14: 123,647,161 (GRCm39)	W571R	possibly damaging	Het
Nkx2-5	G	C	17: 27,060,095 (GRCm39)	P79A	probably benign	Het
Odad1	A	G	7: 45,591,134 (GRCm39)	E203G	probably damaging	Het
Or13p4	G	A	4: 118,547,728 (GRCm39)		probably benign	Het
Or5al1	C	T	2: 85,989,800 (GRCm39)	V305I	probably benign	Het
Or5b109	A	G	19: 13,212,468 (GRCm39)	M285V	possibly damaging	Het
Phkb	A	G	8: 86,745,171 (GRCm39)	D616G	probably benign	Het
Plch1	C	T	3: 63,688,811 (GRCm39)	W131*	probably null	Het
Prl7b1	A	T	13: 27,786,878 (GRCm39)		probably null	Het
Prop1	G	A	11: 50,843,026 (GRCm39)	P54S	probably benign	Het
Ptcd3	C	T	6: 71,862,311 (GRCm39)	V509I	probably benign	Het
Ptprg	T	A	14: 12,226,314 (GRCm38)	D527E	probably damaging	Het
Rapgef2	C	T	3: 78,986,439 (GRCm39)	V1182I	probably benign	Het
Rfx7	C	A	9: 72,525,696 (GRCm39)	P962Q	probably damaging	Het
Rsf1	CG	CGACGGCGGTG	7: 97,229,115 (GRCm39)		probably benign	Homo
Slc38a9	A	G	13: 112,862,634 (GRCm39)	I444M	probably benign	Het
Sorbs1	T	C	19: 40,310,263 (GRCm39)	T492A	probably damaging	Het
Synj1	A	T	16: 90,735,518 (GRCm39)	S1478R	probably benign	Het
Tnn	T	A	1: 159,972,774 (GRCm39)	N276I	probably damaging	Het
Trbv19	G	A	6: 41,155,692 (GRCm39)	G21D	probably damaging	Het
Ube2o	A	T	11: 116,430,185 (GRCm39)	D1184E	probably benign	Het
Vmn1r181	G	A	7: 23,684,183 (GRCm39)	R216Q	probably benign	Het
Vmn2r108	A	T	17: 20,691,977 (GRCm39)	L182*	probably null	Het
Vmn2r15	A	G	5: 109,434,137 (GRCm39)	*856R	probably null	Het
Vmn2r70	G	A	7: 85,208,087 (GRCm39)	H797Y	probably benign	Het
Zfp11	C	T	5: 129,733,587 (GRCm39)	A625T	possibly damaging	Het

Other mutations in Nufip2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01361:Nufip2	APN	11	77,583,196 (GRCm39)	missense	possibly damaging	0.93
R0646:Nufip2	UTSW	11	77,577,279 (GRCm39)	missense	probably benign	0.33
R0667:Nufip2	UTSW	11	77,582,839 (GRCm39)	missense	possibly damaging	0.94
R1544:Nufip2	UTSW	11	77,582,733 (GRCm39)	missense	possibly damaging	0.57
R1546:Nufip2	UTSW	11	77,582,432 (GRCm39)	missense	probably damaging	0.99
R1629:Nufip2	UTSW	11	77,583,834 (GRCm39)	missense	probably benign	0.03
R1719:Nufip2	UTSW	11	77,583,916 (GRCm39)	missense	probably damaging	1.00
R1864:Nufip2	UTSW	11	77,583,124 (GRCm39)	missense	probably damaging	1.00
R3855:Nufip2	UTSW	11	77,583,715 (GRCm39)	missense	probably damaging	0.97
R4489:Nufip2	UTSW	11	77,577,055 (GRCm39)	start codon destroyed	probably null
R4584:Nufip2	UTSW	11	77,632,554 (GRCm39)	missense	unknown
R4585:Nufip2	UTSW	11	77,632,554 (GRCm39)	missense	unknown
R4586:Nufip2	UTSW	11	77,632,554 (GRCm39)	missense	unknown
R4779:Nufip2	UTSW	11	77,577,154 (GRCm39)	missense	unknown
R5111:Nufip2	UTSW	11	77,582,669 (GRCm39)	missense	probably benign	0.01
R5354:Nufip2	UTSW	11	77,577,103 (GRCm39)	missense	unknown
R6051:Nufip2	UTSW	11	77,582,742 (GRCm39)	missense	probably damaging	1.00
R6505:Nufip2	UTSW	11	77,582,439 (GRCm39)	missense	probably benign	0.36
R6941:Nufip2	UTSW	11	77,577,122 (GRCm39)	small deletion	probably benign
R7237:Nufip2	UTSW	11	77,583,596 (GRCm39)	missense	probably benign	0.00
R8351:Nufip2	UTSW	11	77,583,181 (GRCm39)	missense	probably damaging	0.98
R8355:Nufip2	UTSW	11	77,583,259 (GRCm39)	missense	probably damaging	1.00
R8451:Nufip2	UTSW	11	77,583,181 (GRCm39)	missense	probably damaging	0.98
R8455:Nufip2	UTSW	11	77,583,259 (GRCm39)	missense	probably damaging	1.00
R8547:Nufip2	UTSW	11	77,583,391 (GRCm39)	missense	probably damaging	1.00
R8859:Nufip2	UTSW	11	77,584,069 (GRCm39)	missense	probably benign	0.00
R8912:Nufip2	UTSW	11	77,632,554 (GRCm39)	missense	unknown
R9244:Nufip2	UTSW	11	77,583,475 (GRCm39)	missense	probably damaging	0.96
Z1176:Nufip2	UTSW	11	77,632,617 (GRCm39)	makesense	probably null

Predicted Primers

PCR Primer
(F):5'- CAGCTTAGTATTGGGTTCAGTAAAG -3'
(R):5'- GCCTGAACTACTTGTTATAACACC -3'

Sequencing Primer
(F):5'- TCAGTAAAGTTGTTTGGTCTTAGTAC -3'
(R):5'- CACCATTTGGAATTGCTATGGTATCG -3'

Posted On

2018-04-02