Mutagenetix > Incidental Mutation

Incidental Mutation 'R6354:Cwf19l1'

512994

Institutional Source

Beutler Lab

Gene Symbol

Cwf19l1

Ensembl Gene

ENSMUSG00000025200

Gene Name

CWF19 like cell cycle control factor 1

Synonyms

2610528C06Rik

MMRRC Submission

044506-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.822) question?

Stock #

R6354 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

44097076-44124315 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 44115912 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glutamic Acid at position 172 (D172E)

Ref Sequence

ENSEMBL: ENSMUSP00000026218 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000026218]

AlphaFold

Q8CI33

Predicted Effect

probably benign
Transcript: ENSMUST00000026218
AA Change: D172E

PolyPhen 2 Score 0.102 (Sensitivity: 0.93; Specificity: 0.86)

SMART Domains

Protein: ENSMUSP00000026218
Gene: ENSMUSG00000025200
AA Change: D172E

Domain	Start	End	E-Value	Type
Pfam:CwfJ_C_1	314	433	5.6e-37	PFAM
Pfam:CwfJ_C_2	439	534	2.1e-19	PFAM

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 100.0%
3x: 99.8%
10x: 98.5%
20x: 95.3%

Validation Efficiency

100% (56/56)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the CWF19 protein family. Mutations in this gene have been associated with autosomal recessive spinocerebellar ataxia-17 and mild mental retardation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700012B07Rik	T	C	11: 109,685,042 (GRCm39)	K152E	probably benign	Het
Adamts20	C	A	15: 94,245,691 (GRCm39)	C537F	probably damaging	Het
Apc	A	T	18: 34,445,581 (GRCm39)	T808S	probably benign	Het
Atad3a	A	G	4: 155,838,402 (GRCm39)	I205T	possibly damaging	Het
Casz1	G	T	4: 149,036,999 (GRCm39)	G1754C	unknown	Het
Ccdc62	C	T	5: 124,082,267 (GRCm39)	A232V	probably damaging	Het
Cdc27	C	A	11: 104,425,574 (GRCm39)	D81Y	probably damaging	Het
Cep126	A	G	9: 8,099,928 (GRCm39)	S869P	probably damaging	Het
Cfap251	C	T	5: 123,440,818 (GRCm39)	T1125I	probably damaging	Het
Ciita	A	T	16: 10,341,610 (GRCm39)	K983N	probably damaging	Het
Cimap1a	A	G	7: 140,430,527 (GRCm39)		probably null	Het
Clstn1	A	C	4: 149,727,673 (GRCm39)	Q523P	probably benign	Het
Cpb2	T	C	14: 75,495,145 (GRCm39)		probably null	Het
Crybg2	A	G	4: 133,818,447 (GRCm39)	D1710G	probably benign	Het
Csmd3	C	T	15: 47,744,885 (GRCm39)	G1370D	probably damaging	Het
Cyp4a14	A	G	4: 115,344,441 (GRCm39)	F475L	probably damaging	Het
Fam98c	C	T	7: 28,852,272 (GRCm39)	V298M	probably damaging	Het
Gcsh	T	C	8: 117,710,582 (GRCm39)	N127S	probably benign	Het
Gimap4	T	C	6: 48,663,814 (GRCm39)	F10S	possibly damaging	Het
Gm4787	C	T	12: 81,424,755 (GRCm39)	A468T	probably damaging	Het
Gm5111	G	A	6: 48,567,268 (GRCm39)		probably benign	Het
Gm7137	C	A	10: 77,623,481 (GRCm39)		probably benign	Het
Inpp1	A	G	1: 52,836,224 (GRCm39)	S81P	probably damaging	Het
Iqce	T	C	5: 140,662,090 (GRCm39)		probably null	Het
Ivl	CCTGCTGCTGCTGCT	CCTGCTGCTGCT	3: 92,479,217 (GRCm39)		probably benign	Het
Krtap13	C	A	16: 88,548,131 (GRCm39)	C119F	probably damaging	Het
Lama2	G	T	10: 27,088,064 (GRCm39)	D904E	probably damaging	Het
Lrrc37a	T	A	11: 103,355,213 (GRCm39)	I2535F	unknown	Het
Lrrc40	T	A	3: 157,766,901 (GRCm39)	L452*	probably null	Het
Meis1	A	T	11: 18,966,184 (GRCm39)	M63K	possibly damaging	Het
Mpo	T	A	11: 87,688,172 (GRCm39)	I277N	possibly damaging	Het
Mtmr11	T	A	3: 96,075,992 (GRCm39)	F406I	probably benign	Het
Muc4	T	C	16: 32,575,476 (GRCm39)	S1411P	probably benign	Het
Or2y1b	A	T	11: 49,208,465 (GRCm39)	I31F	probably damaging	Het
Or4c102	T	A	2: 88,422,478 (GRCm39)	I110N	probably damaging	Het
Or56a5	G	A	7: 104,792,915 (GRCm39)	T195I	probably benign	Het
Phf21a	G	A	2: 92,179,282 (GRCm39)	G298R	probably damaging	Het
Phldb2	T	C	16: 45,645,477 (GRCm39)	Y368C	probably damaging	Het
Pik3cb	G	T	9: 98,955,696 (GRCm39)	T407K	probably benign	Het
Robo3	A	T	9: 37,328,513 (GRCm39)		probably benign	Het
Sgsm1	T	G	5: 113,430,522 (GRCm39)	T288P	probably damaging	Het
Slc5a7	A	G	17: 54,584,061 (GRCm39)	S410P	probably damaging	Het
Tmc6	A	C	11: 117,665,062 (GRCm39)	C404G	probably benign	Het
Tnrc6c	A	T	11: 117,640,440 (GRCm39)	Q1410L	possibly damaging	Het
Trak1	A	T	9: 121,280,792 (GRCm39)	T384S	probably null	Het
Txlna	A	T	4: 129,528,205 (GRCm39)	L244Q	probably damaging	Het
Ube3c	T	C	5: 29,868,581 (GRCm39)	F939L	probably damaging	Het
Vmn2r65	T	A	7: 84,589,574 (GRCm39)	I781F	probably benign	Het
Vmn2r72	A	G	7: 85,399,747 (GRCm39)		probably null	Het
Vps36	T	C	8: 22,695,771 (GRCm39)	S109P	probably damaging	Het
Wrn	T	C	8: 33,833,666 (GRCm39)	I82M	possibly damaging	Het
Zbtb49	T	C	5: 38,360,903 (GRCm39)	R511G	possibly damaging	Het
Zeb1	A	G	18: 5,772,743 (GRCm39)	T1011A	possibly damaging	Het
Zfhx4	T	C	3: 5,467,011 (GRCm39)	S2390P	probably benign	Het
Zfp619	C	A	7: 39,184,243 (GRCm39)	T91K	probably benign	Het
Zfp644	A	G	5: 106,784,619 (GRCm39)	S643P	probably benign	Het

Other mutations in Cwf19l1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00923:Cwf19l1	APN	19	44,119,849 (GRCm39)	critical splice donor site	probably null
IGL01691:Cwf19l1	APN	19	44,109,311 (GRCm39)	critical splice donor site	probably null
IGL02427:Cwf19l1	APN	19	44,121,462 (GRCm39)	nonsense	probably null
IGL03234:Cwf19l1	APN	19	44,115,809 (GRCm39)	missense	probably damaging	1.00
IGL03236:Cwf19l1	APN	19	44,115,887 (GRCm39)	missense	probably benign	0.00
IGL03275:Cwf19l1	APN	19	44,111,696 (GRCm39)	missense	probably benign	0.10
R0068:Cwf19l1	UTSW	19	44,119,938 (GRCm39)	missense	probably damaging	0.99
R0068:Cwf19l1	UTSW	19	44,119,938 (GRCm39)	missense	probably damaging	0.99
R0486:Cwf19l1	UTSW	19	44,103,129 (GRCm39)	missense	probably benign	0.35
R1820:Cwf19l1	UTSW	19	44,115,826 (GRCm39)	missense	probably benign	0.00
R2317:Cwf19l1	UTSW	19	44,120,597 (GRCm39)	missense	possibly damaging	0.92
R2418:Cwf19l1	UTSW	19	44,119,911 (GRCm39)	missense	probably benign
R2438:Cwf19l1	UTSW	19	44,099,002 (GRCm39)	missense	probably benign	0.00
R3796:Cwf19l1	UTSW	19	44,103,006 (GRCm39)	missense	probably damaging	0.97
R3850:Cwf19l1	UTSW	19	44,119,937 (GRCm39)	missense	probably benign	0.24
R4518:Cwf19l1	UTSW	19	44,121,473 (GRCm39)	missense	probably damaging	1.00
R4855:Cwf19l1	UTSW	19	44,103,006 (GRCm39)	missense	probably damaging	0.97
R5402:Cwf19l1	UTSW	19	44,121,524 (GRCm39)	critical splice acceptor site	probably null
R5587:Cwf19l1	UTSW	19	44,109,316 (GRCm39)	missense	possibly damaging	0.49
R5785:Cwf19l1	UTSW	19	44,110,380 (GRCm39)	missense	probably damaging	0.98
R6652:Cwf19l1	UTSW	19	44,103,138 (GRCm39)	missense	probably benign	0.11
R7365:Cwf19l1	UTSW	19	44,120,579 (GRCm39)	missense	probably damaging	1.00
R7548:Cwf19l1	UTSW	19	44,098,989 (GRCm39)	missense	probably benign	0.18
R7562:Cwf19l1	UTSW	19	44,117,680 (GRCm39)	missense	probably damaging	1.00
R9005:Cwf19l1	UTSW	19	44,111,653 (GRCm39)	missense	possibly damaging	0.90
R9068:Cwf19l1	UTSW	19	44,124,274 (GRCm39)	unclassified	probably benign
R9235:Cwf19l1	UTSW	19	44,113,275 (GRCm39)	missense	probably damaging	1.00
R9695:Cwf19l1	UTSW	19	44,101,425 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CGTCTTAGACTCGAAGGAACC -3'
(R):5'- GGTTTCCAACAGTTGTGTCATTTC -3'

Sequencing Primer
(F):5'- TCTTAGACTCGAAGGAACCAAGATAC -3'
(R):5'- GATTGCCTAGGTATGCAG -3'

Posted On

2018-04-27