Mutagenetix > Incidental Mutation

Incidental Mutation 'R6385:Or52e19b'

515553

Institutional Source

Beutler Lab

Gene Symbol

Or52e19b

Ensembl Gene

ENSMUSG00000059874

Gene Name

olfactory receptor family 52 subfamily E member 19B

Synonyms

MOR32-2, GA_x6K02T2PBJ9-6092550-6092362, GA_x6K02T2PBJ9-6096387-6095449, Olfr604, Olfr603, MOR32-14_i

MMRRC Submission

044534-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.060) question?

Stock #

R6385 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

103032269-103033207 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 103033104 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Aspartic acid at position 35 (V35D)

Ref Sequence

ENSEMBL: ENSMUSP00000151321 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000071844] [ENSMUST00000218246]

AlphaFold

L7N1Y4

Predicted Effect

possibly damaging
Transcript: ENSMUST00000071844
AA Change: V35D

PolyPhen 2 Score 0.608 (Sensitivity: 0.87; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000071744
Gene: ENSMUSG00000059874
AA Change: V35D

Domain	Start	End	E-Value	Type
Pfam:7tm_4	33	311	1.7e-120	PFAM
Pfam:7TM_GPCR_Srsx	37	210	1.9e-10	PFAM
Pfam:7tm_1	43	293	5.4e-16	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000218246
AA Change: V35D

PolyPhen 2 Score 0.608 (Sensitivity: 0.87; Specificity: 0.91)

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.3%
20x: 97.4%

Validation Efficiency

98% (55/56)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
3425401B19Rik	T	A	14: 32,383,236 (GRCm39)	M910L	probably benign	Het
Abca9	T	A	11: 110,025,080 (GRCm39)	I988F	probably damaging	Het
Adgra2	A	T	8: 27,608,878 (GRCm39)	S92C	probably damaging	Het
Apon	A	G	10: 128,090,223 (GRCm39)		probably benign	Het
Arap3	G	A	18: 38,130,084 (GRCm39)	R26*	probably null	Het
Btnl6	T	G	17: 34,727,343 (GRCm39)	I396L	probably benign	Het
Catsper3	G	T	13: 55,934,239 (GRCm39)	Q53H	probably damaging	Het
Cep164	T	G	9: 45,691,081 (GRCm39)	E372A	probably damaging	Het
Cln3	A	T	7: 126,174,207 (GRCm39)	C339S	probably null	Het
Cntnap2	G	A	6: 46,833,114 (GRCm39)	D776N	probably benign	Het
Cttnbp2nl	A	G	3: 104,912,952 (GRCm39)	F311L	probably benign	Het
Daam2	C	T	17: 49,770,964 (GRCm39)	A918T	probably damaging	Het
Dst	T	C	1: 34,346,549 (GRCm39)	V7353A	possibly damaging	Het
Enpp5	G	A	17: 44,396,155 (GRCm39)	G356S	probably damaging	Het
Fanca	A	T	8: 124,032,606 (GRCm39)		probably null	Het
Filip1	G	T	9: 79,727,813 (GRCm39)	Q269K	possibly damaging	Het
Fut9	G	A	4: 25,620,328 (GRCm39)	S162L	probably damaging	Het
Gtf2ird1	A	T	5: 134,433,544 (GRCm39)	H294Q	probably benign	Het
Gucy1a1	A	G	3: 82,016,313 (GRCm39)	I225T	probably benign	Het
H2-DMb1	T	A	17: 34,374,576 (GRCm39)	N75K	probably benign	Het
Helz2	C	T	2: 180,875,260 (GRCm39)	E1745K	probably damaging	Het
Hes1	A	G	16: 29,884,424 (GRCm39)	M6V	possibly damaging	Het
Hydin	A	T	8: 111,038,856 (GRCm39)	H198L	possibly damaging	Het
Iars1	T	C	13: 49,855,371 (GRCm39)	L266P	probably damaging	Het
Ifna11	A	G	4: 88,738,386 (GRCm39)	E64G	probably damaging	Het
Inpp5d	T	A	1: 87,627,397 (GRCm39)	L566Q	probably damaging	Het
Kcnh3	T	C	15: 99,125,822 (GRCm39)	S160P	probably benign	Het
Lama5	T	C	2: 179,838,326 (GRCm39)	T850A	probably damaging	Het
Lgi3	A	G	14: 70,768,610 (GRCm39)	T36A	possibly damaging	Het
Lrp2	T	C	2: 69,326,128 (GRCm39)	S1810G	probably benign	Het
Lypd10	A	T	7: 24,413,535 (GRCm39)	I184F	probably damaging	Het
Msln	T	A	17: 25,970,115 (GRCm39)	D280V	probably benign	Het
Myh4	A	T	11: 67,146,663 (GRCm39)	I1513F	probably damaging	Het
Ncf2	A	T	1: 152,706,173 (GRCm39)	M262L	probably benign	Het
Neb	G	T	2: 52,075,311 (GRCm39)	A218D	probably damaging	Het
Notch4	C	A	17: 34,792,788 (GRCm39)	Q640K	probably null	Het
Or4f7	T	C	2: 111,644,964 (GRCm39)	I36V	probably benign	Het
Or6k6	A	T	1: 173,944,862 (GRCm39)	F240Y	probably damaging	Het
Pear1	G	T	3: 87,661,506 (GRCm39)	H562N	probably benign	Het
Poli	C	A	18: 70,663,072 (GRCm39)		probably benign	Het
Ppp3r2	A	G	4: 49,681,767 (GRCm39)	I61T	possibly damaging	Het
Rfc5	T	C	5: 117,523,463 (GRCm39)	T112A	probably benign	Het
Serhl	A	G	15: 82,985,823 (GRCm39)	T5A	probably benign	Het
Shank3	T	C	15: 89,405,578 (GRCm39)		probably null	Het
Slc22a28	A	G	19: 8,078,844 (GRCm39)	S282P	probably damaging	Het
Slc2a12	C	T	10: 22,569,929 (GRCm39)	T540I	possibly damaging	Het
Slurp2	T	C	15: 74,618,524 (GRCm39)	M1V	probably null	Het
St3gal1	A	G	15: 66,983,195 (GRCm39)	V187A	possibly damaging	Het
Tln2	C	T	9: 67,185,411 (GRCm39)	A700T	probably benign	Het
Ttn	C	T	2: 76,748,192 (GRCm39)	V4286I	probably benign	Het
Ube2u	A	G	4: 100,389,341 (GRCm39)	K214R	possibly damaging	Het
Vmn1r46	A	G	6: 89,953,427 (GRCm39)	H92R	probably damaging	Het
Wdr90	A	G	17: 26,067,504 (GRCm39)	I1486T	probably damaging	Het
Zc3h11a	A	T	1: 133,565,192 (GRCm39)	S236T	possibly damaging	Het
Zfp318	A	G	17: 46,721,932 (GRCm39)	K1312E	probably damaging	Het
Zfp930	A	G	8: 69,681,283 (GRCm39)	Y326C	probably damaging	Het
Zfp972	G	T	2: 177,563,588 (GRCm39)	D8E	probably damaging	Het

Other mutations in Or52e19b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00820:Or52e19b	APN	7	103,032,672 (GRCm39)	missense	probably damaging	0.98
IGL01582:Or52e19b	APN	7	103,032,806 (GRCm39)	nonsense	probably null
IGL01788:Or52e19b	APN	7	103,032,770 (GRCm39)	missense	probably benign	0.00
IGL02837:Or52e19b	UTSW	7	103,032,822 (GRCm39)	missense	probably damaging	1.00
R1807:Or52e19b	UTSW	7	103,032,790 (GRCm39)	missense	probably benign	0.25
R2097:Or52e19b	UTSW	7	103,032,840 (GRCm39)	missense	probably damaging	1.00
R2161:Or52e19b	UTSW	7	103,032,407 (GRCm39)	missense	probably benign	0.01
R4870:Or52e19b	UTSW	7	103,032,840 (GRCm39)	missense	probably damaging	1.00
R5116:Or52e19b	UTSW	7	103,033,071 (GRCm39)	missense	probably benign	0.03
R6263:Or52e19b	UTSW	7	103,032,403 (GRCm39)	missense	possibly damaging	0.88
R6980:Or52e19b	UTSW	7	103,032,303 (GRCm39)	missense	probably benign	0.01
R7474:Or52e19b	UTSW	7	103,032,969 (GRCm39)	missense	probably damaging	0.99
R7754:Or52e19b	UTSW	7	103,032,945 (GRCm39)	missense	probably damaging	1.00
R7842:Or52e19b	UTSW	7	103,032,783 (GRCm39)	missense	probably benign	0.00
R7947:Or52e19b	UTSW	7	103,032,735 (GRCm39)	missense	possibly damaging	0.95
R7980:Or52e19b	UTSW	7	103,032,970 (GRCm39)	missense	probably damaging	0.99
R8176:Or52e19b	UTSW	7	103,033,071 (GRCm39)	missense	probably benign	0.03
R8523:Or52e19b	UTSW	7	103,032,413 (GRCm39)	missense	probably benign	0.31
R8817:Or52e19b	UTSW	7	103,032,825 (GRCm39)	missense	probably damaging	1.00
R8845:Or52e19b	UTSW	7	103,032,357 (GRCm39)	missense	probably damaging	0.98
R8968:Or52e19b	UTSW	7	103,032,667 (GRCm39)	missense	probably damaging	1.00
R9398:Or52e19b	UTSW	7	103,032,487 (GRCm39)	missense	probably damaging	0.97
R9770:Or52e19b	UTSW	7	103,032,613 (GRCm39)	missense	probably damaging	0.99
Z1177:Or52e19b	UTSW	7	103,033,009 (GRCm39)	missense	probably benign	0.03

Predicted Primers

PCR Primer
(F):5'- TGAGGCAGCCTTCAAAGCTTATC -3'
(R):5'- GCCATACCAGGGATTCATCTAC -3'

Sequencing Primer
(F):5'- AGCTTATCTCCCTAAGGTTGAACCAG -3'
(R):5'- ACCAGGGATTCATCTACAACTTTC -3'

Posted On

2018-05-04