Incidental Mutation 'R6499:Oog4'
ID |
519622 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Oog4
|
Ensembl Gene |
ENSMUSG00000047799 |
Gene Name |
oogenesin 4 |
Synonyms |
|
MMRRC Submission |
044631-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.095)
|
Stock # |
R6499 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
143163734-143176894 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to C
at 143164548 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Alanine
at position 328
(S328A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000073325
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061277]
[ENSMUST00000073641]
|
AlphaFold |
Q4G0C7 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000061277
AA Change: S256A
PolyPhen 2
Score 0.457 (Sensitivity: 0.89; Specificity: 0.90)
|
SMART Domains |
Protein: ENSMUSP00000052217 Gene: ENSMUSG00000047799 AA Change: S256A
Domain | Start | End | E-Value | Type |
SCOP:d1a4ya_
|
195 |
357 |
6e-7 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000073641
AA Change: S328A
PolyPhen 2
Score 0.957 (Sensitivity: 0.78; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000073325 Gene: ENSMUSG00000047799 AA Change: S328A
Domain | Start | End | E-Value | Type |
SCOP:d1a4ya_
|
267 |
429 |
3e-7 |
SMART |
|
Meta Mutation Damage Score |
0.1648 |
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.6%
- 10x: 98.2%
- 20x: 94.7%
|
Validation Efficiency |
98% (43/44) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 43 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1110002E22Rik |
C |
T |
3: 137,774,561 (GRCm39) |
T1250M |
probably damaging |
Het |
Actn1 |
C |
T |
12: 80,215,191 (GRCm39) |
A857T |
possibly damaging |
Het |
Adam2 |
C |
T |
14: 66,296,239 (GRCm39) |
V207I |
probably damaging |
Het |
Angpt2 |
T |
C |
8: 18,744,533 (GRCm39) |
T404A |
probably benign |
Het |
Ank3 |
T |
C |
10: 69,827,574 (GRCm39) |
|
probably benign |
Het |
Atosa |
C |
A |
9: 74,930,930 (GRCm39) |
Q958K |
probably damaging |
Het |
B4galt4 |
T |
A |
16: 38,578,184 (GRCm39) |
D210E |
probably benign |
Het |
Brinp3 |
A |
T |
1: 146,777,431 (GRCm39) |
H626L |
possibly damaging |
Het |
Ccna2 |
T |
G |
3: 36,625,112 (GRCm39) |
D68A |
probably damaging |
Het |
Cd163 |
G |
A |
6: 124,281,703 (GRCm39) |
G2D |
probably benign |
Het |
Chrm5 |
A |
T |
2: 112,310,825 (GRCm39) |
V97D |
probably benign |
Het |
Dctn5 |
G |
A |
7: 121,734,320 (GRCm39) |
V55I |
probably benign |
Het |
Dnm3 |
A |
T |
1: 162,141,164 (GRCm39) |
I365N |
probably damaging |
Het |
Esyt2 |
A |
G |
12: 116,284,790 (GRCm39) |
D184G |
probably damaging |
Het |
Ifi214 |
C |
A |
1: 173,352,597 (GRCm39) |
K277N |
probably damaging |
Het |
Il11ra1 |
C |
T |
4: 41,765,412 (GRCm39) |
P169L |
probably benign |
Het |
Inhbb |
C |
T |
1: 119,345,069 (GRCm39) |
E407K |
probably damaging |
Het |
Lama2 |
T |
A |
10: 26,907,154 (GRCm39) |
T2336S |
probably damaging |
Het |
Ldhb |
A |
T |
6: 142,439,847 (GRCm39) |
V231E |
possibly damaging |
Het |
Lrit2 |
T |
C |
14: 36,790,767 (GRCm39) |
F149L |
probably damaging |
Het |
Malrd1 |
T |
A |
2: 15,936,500 (GRCm39) |
S1575T |
probably benign |
Het |
Naip5 |
A |
G |
13: 100,358,102 (GRCm39) |
C1045R |
probably benign |
Het |
Nefl |
A |
G |
14: 68,322,034 (GRCm39) |
E208G |
probably damaging |
Het |
Or1e1 |
T |
A |
11: 73,245,011 (GRCm39) |
L144Q |
probably damaging |
Het |
Or5p79 |
G |
T |
7: 108,221,713 (GRCm39) |
M231I |
probably benign |
Het |
Or6c216 |
T |
C |
10: 129,678,453 (GRCm39) |
I153V |
probably benign |
Het |
Or7e168 |
A |
G |
9: 19,719,847 (GRCm39) |
I78V |
probably benign |
Het |
Pbrm1 |
A |
G |
14: 30,783,466 (GRCm39) |
N528D |
probably damaging |
Het |
Pls1 |
A |
G |
9: 95,636,798 (GRCm39) |
I558T |
probably damaging |
Het |
Polq |
T |
C |
16: 36,881,189 (GRCm39) |
S839P |
probably benign |
Het |
Psmg1 |
A |
G |
16: 95,789,297 (GRCm39) |
F87L |
probably damaging |
Het |
Ptprt |
A |
G |
2: 161,376,507 (GRCm39) |
M1298T |
probably benign |
Het |
Rbm27 |
T |
A |
18: 42,470,076 (GRCm39) |
W958R |
probably damaging |
Het |
Skint5 |
T |
G |
4: 113,396,552 (GRCm39) |
D1207A |
unknown |
Het |
Stx17 |
T |
A |
4: 48,183,478 (GRCm39) |
|
probably null |
Het |
Tas2r114 |
A |
T |
6: 131,666,099 (GRCm39) |
*310R |
probably null |
Het |
Tmem130 |
T |
A |
5: 144,689,224 (GRCm39) |
N139I |
probably damaging |
Het |
Trpc1 |
T |
C |
9: 95,608,490 (GRCm39) |
E267G |
probably damaging |
Het |
Trrap |
T |
A |
5: 144,793,812 (GRCm39) |
M3398K |
probably damaging |
Het |
Vrtn |
T |
G |
12: 84,697,090 (GRCm39) |
D613E |
probably benign |
Het |
Vsx1 |
G |
T |
2: 150,530,441 (GRCm39) |
T147K |
probably benign |
Het |
Wdr55 |
T |
C |
18: 36,895,231 (GRCm39) |
V103A |
probably benign |
Het |
Zfp712 |
A |
T |
13: 67,200,400 (GRCm39) |
D28E |
probably benign |
Het |
|
Other mutations in Oog4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01580:Oog4
|
APN |
4 |
143,165,682 (GRCm39) |
missense |
probably benign |
0.27 |
IGL02207:Oog4
|
APN |
4 |
143,165,510 (GRCm39) |
missense |
probably benign |
0.20 |
R0038:Oog4
|
UTSW |
4 |
143,165,514 (GRCm39) |
missense |
probably benign |
0.20 |
R0038:Oog4
|
UTSW |
4 |
143,165,514 (GRCm39) |
missense |
probably benign |
0.20 |
R0326:Oog4
|
UTSW |
4 |
143,165,773 (GRCm39) |
missense |
probably benign |
0.03 |
R0372:Oog4
|
UTSW |
4 |
143,164,259 (GRCm39) |
missense |
probably damaging |
1.00 |
R1056:Oog4
|
UTSW |
4 |
143,164,581 (GRCm39) |
missense |
possibly damaging |
0.72 |
R1598:Oog4
|
UTSW |
4 |
143,164,571 (GRCm39) |
missense |
probably damaging |
0.99 |
R1712:Oog4
|
UTSW |
4 |
143,166,484 (GRCm39) |
missense |
probably damaging |
1.00 |
R4028:Oog4
|
UTSW |
4 |
143,166,770 (GRCm39) |
missense |
probably benign |
0.02 |
R4029:Oog4
|
UTSW |
4 |
143,166,770 (GRCm39) |
missense |
probably benign |
0.02 |
R4030:Oog4
|
UTSW |
4 |
143,166,770 (GRCm39) |
missense |
probably benign |
0.02 |
R4705:Oog4
|
UTSW |
4 |
143,165,445 (GRCm39) |
missense |
probably benign |
0.00 |
R5260:Oog4
|
UTSW |
4 |
143,164,424 (GRCm39) |
missense |
probably benign |
0.00 |
R5945:Oog4
|
UTSW |
4 |
143,164,293 (GRCm39) |
missense |
probably benign |
0.01 |
R6614:Oog4
|
UTSW |
4 |
143,164,445 (GRCm39) |
missense |
possibly damaging |
0.66 |
R6852:Oog4
|
UTSW |
4 |
143,165,679 (GRCm39) |
missense |
possibly damaging |
0.72 |
R7371:Oog4
|
UTSW |
4 |
143,165,346 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7375:Oog4
|
UTSW |
4 |
143,165,544 (GRCm39) |
missense |
possibly damaging |
0.72 |
R7501:Oog4
|
UTSW |
4 |
143,164,022 (GRCm39) |
frame shift |
probably null |
|
R7564:Oog4
|
UTSW |
4 |
143,164,022 (GRCm39) |
frame shift |
probably null |
|
R7678:Oog4
|
UTSW |
4 |
143,164,022 (GRCm39) |
frame shift |
probably null |
|
R7688:Oog4
|
UTSW |
4 |
143,164,022 (GRCm39) |
frame shift |
probably null |
|
R7689:Oog4
|
UTSW |
4 |
143,164,022 (GRCm39) |
frame shift |
probably null |
|
R8219:Oog4
|
UTSW |
4 |
143,166,508 (GRCm39) |
missense |
probably benign |
0.00 |
R8274:Oog4
|
UTSW |
4 |
143,166,459 (GRCm39) |
splice site |
probably benign |
|
R8352:Oog4
|
UTSW |
4 |
143,164,047 (GRCm39) |
missense |
probably benign |
0.22 |
R8452:Oog4
|
UTSW |
4 |
143,164,047 (GRCm39) |
missense |
probably benign |
0.22 |
Z1177:Oog4
|
UTSW |
4 |
143,164,145 (GRCm39) |
missense |
probably benign |
0.06 |
Z1177:Oog4
|
UTSW |
4 |
143,164,144 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
Predicted Primers |
PCR Primer
(F):5'- CTTAGGGCAGGCAAAATGGC -3'
(R):5'- CAGACAACAGAAGGTCATGTCC -3'
Sequencing Primer
(F):5'- AATGGCACTGATCTGAGAGTCCTC -3'
(R):5'- TCATGTCCTGGGGCTTGACC -3'
|
Posted On |
2018-06-06 |