Incidental Mutation 'R6469:Serpina3i'
| ID |
520284 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Serpina3i
|
| Ensembl Gene |
ENSMUSG00000079014 |
| Gene Name |
serine (or cysteine) peptidase inhibitor, clade A, member 3I |
| Synonyms |
alpha-1 antiproteinase, antitrypsin, 2B2, Gm6930 |
| MMRRC Submission |
044602-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.059)
|
| Stock # |
R6469 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
12 |
| Chromosomal Location |
104229381-104235631 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 104232776 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Glutamic Acid
at position 227
(V227E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000105584
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000109958]
|
| AlphaFold |
D3Z450 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000109958
AA Change: V227E
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000105584
Gene: ENSMUSG00000079014
AA Change: V227E
| Domain | Start | End | E-Value | Type |
|---|
|
SERPIN
|
46 |
407 |
8.45e-187 |
SMART |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000109960
|
| Meta Mutation Damage Score |
0.7071 |
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.4%
- 10x: 97.2%
- 20x: 91.3%
|
| Validation Efficiency |
100% (43/43) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1110002E22Rik |
T |
G |
3: 137,772,736 (GRCm39) |
S642A |
probably damaging |
Het |
| Aadacl2 |
A |
T |
3: 59,932,210 (GRCm39) |
T242S |
probably benign |
Het |
| Adprh |
T |
C |
16: 38,270,671 (GRCm39) |
M45V |
probably benign |
Het |
| Akr1c13 |
T |
C |
13: 4,246,511 (GRCm39) |
|
probably null |
Het |
| Ap3d1 |
A |
C |
10: 80,547,992 (GRCm39) |
V900G |
probably benign |
Het |
| Bak1 |
G |
A |
17: 27,240,293 (GRCm39) |
R125C |
probably damaging |
Het |
| Bmpr1b |
T |
C |
3: 141,562,222 (GRCm39) |
T322A |
possibly damaging |
Het |
| Camsap3 |
T |
A |
8: 3,653,941 (GRCm39) |
L521Q |
possibly damaging |
Het |
| Col6a6 |
A |
T |
9: 105,575,890 (GRCm39) |
F2157I |
probably damaging |
Het |
| Dcun1d4 |
G |
A |
5: 73,691,957 (GRCm39) |
M155I |
probably damaging |
Het |
| Diaph3 |
T |
C |
14: 86,893,974 (GRCm39) |
S12G |
possibly damaging |
Het |
| Enpp5 |
G |
A |
17: 44,396,155 (GRCm39) |
G356S |
probably damaging |
Het |
| Fan1 |
T |
A |
7: 64,022,234 (GRCm39) |
N340Y |
probably damaging |
Het |
| Fgb |
A |
T |
3: 82,953,449 (GRCm39) |
L107* |
probably null |
Het |
| Ganab |
T |
C |
19: 8,879,996 (GRCm39) |
|
probably null |
Het |
| Gba1 |
C |
T |
3: 89,111,388 (GRCm39) |
P51L |
probably benign |
Het |
| Glb1l2 |
T |
C |
9: 26,707,828 (GRCm39) |
D60G |
probably benign |
Het |
| Idh3b |
AG |
AGCACCACAACTG |
2: 130,121,593 (GRCm39) |
|
probably null |
Het |
| Itih2 |
A |
G |
2: 10,128,224 (GRCm39) |
V159A |
possibly damaging |
Het |
| Kif1b |
T |
C |
4: 149,277,053 (GRCm39) |
M1337V |
probably benign |
Het |
| Lrch1 |
C |
T |
14: 75,054,525 (GRCm39) |
R323Q |
probably damaging |
Het |
| Lrrc30 |
T |
C |
17: 67,938,860 (GRCm39) |
N240S |
probably benign |
Het |
| Mrgpra9 |
T |
C |
7: 46,884,854 (GRCm39) |
Y271C |
probably benign |
Het |
| Ncor1 |
T |
C |
11: 62,234,128 (GRCm39) |
H682R |
probably damaging |
Het |
| Or14j4 |
A |
T |
17: 37,921,204 (GRCm39) |
V146E |
probably damaging |
Het |
| Pax9 |
C |
A |
12: 56,743,648 (GRCm39) |
F98L |
probably damaging |
Het |
| Phlpp1 |
G |
A |
1: 106,214,833 (GRCm39) |
R585Q |
probably damaging |
Het |
| Prkdc |
A |
G |
16: 15,612,939 (GRCm39) |
T3166A |
probably benign |
Het |
| Prr11 |
T |
A |
11: 86,988,003 (GRCm39) |
Q300L |
possibly damaging |
Het |
| Rad50 |
T |
A |
11: 53,575,062 (GRCm39) |
E620D |
probably benign |
Het |
| Rpl3 |
A |
T |
15: 79,967,546 (GRCm39) |
|
probably null |
Het |
| Sacs |
G |
T |
14: 61,428,697 (GRCm39) |
G252V |
probably damaging |
Het |
| Smap2 |
GACTCTAC |
GAC |
4: 120,830,282 (GRCm39) |
|
probably benign |
Het |
| Snx19 |
T |
C |
9: 30,339,039 (GRCm39) |
V59A |
possibly damaging |
Het |
| St3gal1 |
A |
G |
15: 66,983,195 (GRCm39) |
V187A |
possibly damaging |
Het |
| Tcstv2c |
T |
A |
13: 120,616,349 (GRCm39) |
W63R |
probably damaging |
Het |
| Tsc1 |
G |
A |
2: 28,561,898 (GRCm39) |
|
probably null |
Het |
| Vmn2r61 |
C |
T |
7: 41,915,283 (GRCm39) |
Q77* |
probably null |
Het |
| Wdr72 |
A |
G |
9: 74,120,643 (GRCm39) |
H954R |
probably benign |
Het |
| Zbtb21 |
T |
C |
16: 97,757,972 (GRCm39) |
M20V |
probably benign |
Het |
| Zkscan16 |
A |
T |
4: 58,956,483 (GRCm39) |
D255V |
probably damaging |
Het |
|
| Other mutations in Serpina3i |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00658:Serpina3i
|
APN |
12 |
104,231,429 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
IGL01311:Serpina3i
|
APN |
12 |
104,233,946 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02661:Serpina3i
|
APN |
12 |
104,231,515 (GRCm39) |
nonsense |
probably null |
|
|
IGL02819:Serpina3i
|
APN |
12 |
104,234,761 (GRCm39) |
missense |
probably damaging |
1.00 |
|
FR4340:Serpina3i
|
UTSW |
12 |
104,231,423 (GRCm39) |
small insertion |
probably benign |
|
|
PIT4431001:Serpina3i
|
UTSW |
12 |
104,231,432 (GRCm39) |
missense |
probably benign |
0.03 |
|
R0091:Serpina3i
|
UTSW |
12 |
104,231,423 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R0678:Serpina3i
|
UTSW |
12 |
104,232,978 (GRCm39) |
critical splice donor site |
probably null |
|
|
R1624:Serpina3i
|
UTSW |
12 |
104,234,897 (GRCm39) |
makesense |
probably null |
|
|
R4604:Serpina3i
|
UTSW |
12 |
104,234,036 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R4814:Serpina3i
|
UTSW |
12 |
104,231,470 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5213:Serpina3i
|
UTSW |
12 |
104,231,914 (GRCm39) |
missense |
probably benign |
|
|
R5464:Serpina3i
|
UTSW |
12 |
104,234,751 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R5504:Serpina3i
|
UTSW |
12 |
104,232,862 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5723:Serpina3i
|
UTSW |
12 |
104,231,759 (GRCm39) |
missense |
probably benign |
0.09 |
|
R5828:Serpina3i
|
UTSW |
12 |
104,231,474 (GRCm39) |
missense |
probably benign |
0.35 |
|
R5922:Serpina3i
|
UTSW |
12 |
104,232,766 (GRCm39) |
missense |
probably benign |
0.15 |
|
R6194:Serpina3i
|
UTSW |
12 |
104,232,762 (GRCm39) |
missense |
probably benign |
0.21 |
|
R6235:Serpina3i
|
UTSW |
12 |
104,232,791 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6631:Serpina3i
|
UTSW |
12 |
104,232,725 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7993:Serpina3i
|
UTSW |
12 |
104,231,407 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R8437:Serpina3i
|
UTSW |
12 |
104,231,963 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8680:Serpina3i
|
UTSW |
12 |
104,231,387 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R9157:Serpina3i
|
UTSW |
12 |
104,231,672 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9249:Serpina3i
|
UTSW |
12 |
104,231,728 (GRCm39) |
nonsense |
probably null |
|
|
R9303:Serpina3i
|
UTSW |
12 |
104,234,881 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9305:Serpina3i
|
UTSW |
12 |
104,234,881 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9313:Serpina3i
|
UTSW |
12 |
104,231,672 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9424:Serpina3i
|
UTSW |
12 |
104,234,730 (GRCm39) |
missense |
probably benign |
|
|
R9572:Serpina3i
|
UTSW |
12 |
104,234,743 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9576:Serpina3i
|
UTSW |
12 |
104,234,730 (GRCm39) |
missense |
probably benign |
|
|
Z1176:Serpina3i
|
UTSW |
12 |
104,233,989 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- CTACTAAGGGACACTGTGCTG -3'
(R):5'- TGGGTTTCAGAGAGTTCTTCCAC -3'
Sequencing Primer
(F):5'- TACTAAGGGACACTGTGCTGTTGAAG -3'
(R):5'- AGAGAGTTCTTCCACTTCCTCAGG -3'
|
| Posted On |
2018-06-06 |
Incidental Mutation