Mutagenetix > Incidental Mutation

Incidental Mutation 'R6528:Vmn1r232'

522131

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r232

Ensembl Gene

ENSMUSG00000062165

Gene Name

vomeronasal 1 receptor 232

Synonyms

V1re4

MMRRC Submission

044654-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.056) question?

Stock #

R6528 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

21133467-21134625 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 21134309 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Isoleucine at position 97 (T97I)

Ref Sequence

ENSEMBL: ENSMUSP00000076261 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000077001]

AlphaFold

A2RTT5

Predicted Effect

probably benign
Transcript: ENSMUST00000077001
AA Change: T97I

PolyPhen 2 Score 0.121 (Sensitivity: 0.93; Specificity: 0.86)

SMART Domains

Protein: ENSMUSP00000076261
Gene: ENSMUSG00000062165
AA Change: T97I

Domain	Start	End	E-Value	Type
Pfam:TAS2R	46	331	6.9e-7	PFAM
Pfam:7tm_1	70	324	1e-6	PFAM
Pfam:V1R	78	338	1.9e-29	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000232004

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.9%
3x: 99.5%
10x: 97.4%
20x: 91.6%

Validation Efficiency

98% (55/56)

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam29	C	T	8: 56,325,596 (GRCm39)	R286H	possibly damaging	Het
Arhgap29	T	A	3: 121,808,351 (GRCm39)	N1176K	probably benign	Het
Cacfd1	T	G	2: 26,908,951 (GRCm39)	D97E	probably benign	Het
Ccnj	C	A	19: 40,820,529 (GRCm39)		probably null	Het
Chad	A	G	11: 94,456,450 (GRCm39)	Y176C	probably damaging	Het
Chd5	T	C	4: 152,441,133 (GRCm39)	L191P	probably damaging	Het
Cmtm1	T	C	8: 105,035,927 (GRCm39)	D190G	possibly damaging	Het
Cyp3a16	C	T	5: 145,377,241 (GRCm39)	A449T	probably damaging	Het
Eml5	T	C	12: 98,790,896 (GRCm39)	E1334G	probably benign	Het
Endou	C	T	15: 97,617,510 (GRCm39)	E147K	probably damaging	Het
Fbxo21	C	A	5: 118,138,421 (GRCm39)	H449N	probably benign	Het
Fkbp15	A	G	4: 62,250,507 (GRCm39)	I363T	probably damaging	Het
Gm12887	C	A	4: 121,472,834 (GRCm39)	G103C	probably damaging	Het
Gm14410	T	A	2: 176,885,301 (GRCm39)	H321L	probably damaging	Het
Gtf2h3	C	T	5: 124,722,360 (GRCm39)	T121I	probably benign	Het
Irgm2	C	T	11: 58,110,878 (GRCm39)	P202S	probably benign	Het
Khsrp	G	A	17: 57,330,543 (GRCm39)	T551I	probably damaging	Het
Lpin2	T	A	17: 71,551,000 (GRCm39)	I720N	probably damaging	Het
Lypd8	G	A	11: 58,275,439 (GRCm39)	G58E	probably damaging	Het
Mdn1	G	T	4: 32,713,780 (GRCm39)	L1952F	probably damaging	Het
Med13	G	A	11: 86,189,780 (GRCm39)	P1043L	probably damaging	Het
Mycbp2	T	C	14: 103,380,317 (GRCm39)	T3832A	probably damaging	Het
Nrxn3	C	T	12: 89,479,819 (GRCm39)	R654C	probably damaging	Het
Or10a3m	T	C	7: 108,312,638 (GRCm39)	L14P	probably damaging	Het
Or12j3	G	T	7: 139,953,354 (GRCm39)	H56Q	possibly damaging	Het
Or13a22	A	G	7: 140,072,964 (GRCm39)	M138V	probably damaging	Het
Or8k35	T	C	2: 86,424,809 (GRCm39)	D121G	probably damaging	Het
Pcdhb6	A	G	18: 37,467,556 (GRCm39)	D159G	probably damaging	Het
Plec	T	C	15: 76,058,630 (GRCm39)	E3759G	probably damaging	Het
Plekho1	C	T	3: 95,896,633 (GRCm39)	D236N	probably damaging	Het
Pnma1	T	A	12: 84,194,197 (GRCm39)	I169F	probably benign	Het
Ppl	T	A	16: 4,905,480 (GRCm39)	H1605L	probably benign	Het
Ppp2r2b	T	A	18: 42,821,403 (GRCm39)	M252L	probably benign	Het
Pramel29	A	G	4: 143,935,381 (GRCm39)	V120A	probably damaging	Het
Prickle4	T	A	17: 48,000,258 (GRCm39)	R246*	probably null	Het
Rad50	G	A	11: 53,543,109 (GRCm39)	T1235I	probably damaging	Het
Ranbp10	T	C	8: 106,506,588 (GRCm39)	N244S	probably damaging	Het
Robo4	T	C	9: 37,315,664 (GRCm39)	S306P	possibly damaging	Het
Shox2	C	A	3: 66,888,618 (GRCm39)	R91L	probably benign	Het
Tbx5	A	G	5: 120,021,176 (GRCm39)	E394G	probably damaging	Het
Tcl1b5	A	G	12: 105,145,258 (GRCm39)	N74S	probably benign	Het
Tgif1	G	A	17: 71,153,555 (GRCm39)		probably benign	Het
Tmem128	T	A	5: 38,423,843 (GRCm39)		probably null	Het
Trio	A	G	15: 27,805,956 (GRCm39)	S511P	probably damaging	Het
Trps1	A	G	15: 50,685,823 (GRCm39)	I114T	probably benign	Het
Ttll8	G	T	15: 88,798,441 (GRCm39)	Q765K	probably benign	Het
Usp17ld	A	T	7: 102,899,962 (GRCm39)	D323E	probably damaging	Het
Vmn2r28	T	A	7: 5,493,684 (GRCm39)	R87S	probably benign	Het
Vps26b	C	G	9: 26,921,762 (GRCm39)	E254D	probably benign	Het
Vps8	C	A	16: 21,372,875 (GRCm39)	Y113*	probably null	Het
Wwc1	C	T	11: 35,744,264 (GRCm39)	E853K	probably benign	Het
Xcr1	A	T	9: 123,685,048 (GRCm39)	I238N	probably damaging	Het
Zar1l	T	A	5: 150,430,595 (GRCm39)	E272V	probably damaging	Het
Zfp451	A	G	1: 33,816,862 (GRCm39)	Y146H	probably damaging	Het
Zfp54	G	T	17: 21,653,736 (GRCm39)	E77*	probably null	Het

Other mutations in Vmn1r232

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00900:Vmn1r232	APN	17	21,134,394 (GRCm39)	missense	probably benign	0.07
IGL02576:Vmn1r232	APN	17	21,134,175 (GRCm39)	missense	probably benign	0.30
H8562:Vmn1r232	UTSW	17	21,133,656 (GRCm39)	missense	probably benign	0.29
R1182:Vmn1r232	UTSW	17	21,133,705 (GRCm39)	missense	possibly damaging	0.95
R2010:Vmn1r232	UTSW	17	21,133,601 (GRCm39)	missense	probably benign	0.00
R2088:Vmn1r232	UTSW	17	21,133,999 (GRCm39)	missense	possibly damaging	0.63
R2206:Vmn1r232	UTSW	17	21,134,465 (GRCm39)	missense	probably benign	0.29
R2207:Vmn1r232	UTSW	17	21,134,465 (GRCm39)	missense	probably benign	0.29
R2273:Vmn1r232	UTSW	17	21,134,465 (GRCm39)	missense	probably benign	0.29
R2274:Vmn1r232	UTSW	17	21,134,465 (GRCm39)	missense	probably benign	0.29
R2275:Vmn1r232	UTSW	17	21,134,465 (GRCm39)	missense	probably benign	0.29
R2443:Vmn1r232	UTSW	17	21,133,646 (GRCm39)	missense	probably damaging	1.00
R2516:Vmn1r232	UTSW	17	21,134,288 (GRCm39)	missense	possibly damaging	0.65
R3700:Vmn1r232	UTSW	17	21,134,465 (GRCm39)	missense	probably benign	0.29
R5256:Vmn1r232	UTSW	17	21,133,846 (GRCm39)	missense	probably damaging	1.00
R5418:Vmn1r232	UTSW	17	21,134,378 (GRCm39)	missense	possibly damaging	0.75
R5726:Vmn1r232	UTSW	17	21,133,601 (GRCm39)	missense	probably benign	0.00
R5833:Vmn1r232	UTSW	17	21,133,913 (GRCm39)	missense	probably damaging	1.00
R7019:Vmn1r232	UTSW	17	21,133,547 (GRCm39)	missense	possibly damaging	0.76
R7600:Vmn1r232	UTSW	17	21,133,999 (GRCm39)	missense	possibly damaging	0.63
R8377:Vmn1r232	UTSW	17	21,134,239 (GRCm39)	missense	probably benign	0.00
R8695:Vmn1r232	UTSW	17	21,134,109 (GRCm39)	missense	probably benign
R9000:Vmn1r232	UTSW	17	21,134,111 (GRCm39)	missense	probably damaging	1.00
R9512:Vmn1r232	UTSW	17	21,134,416 (GRCm39)	missense	probably damaging	0.99
Z1088:Vmn1r232	UTSW	17	21,134,100 (GRCm39)	missense	probably benign	0.38

Predicted Primers

PCR Primer
(F):5'- TTGCCTGGAAGACACTCAAG -3'
(R):5'- TGCACATACATGTCCCAACTTAG -3'

Sequencing Primer
(F):5'- CACTCAAGAGACAAGTGGTGATAATG -3'
(R):5'- TGTCCCAACTTAGAAAACTTACTTC -3'

Posted On

2018-06-06