Incidental Mutation 'IGL01070:Trac'
ID 52653
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Trac
Ensembl Gene ENSMUSG00000076928
Gene Name T cell receptor alpha constant
Synonyms Gm16914, Tcra-C
Accession Numbers
Essential gene? Probably non essential (E-score: 0.050) question?
Stock # IGL01070
Quality Score
Status
Chromosome 14
Chromosomal Location 54457978-54461655 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 54458223 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 82 (T82A)
Gene Model predicted gene model for transcript(s):
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000103736
Predicted Effect probably benign
Transcript: ENSMUST00000103737
Predicted Effect probably benign
Transcript: ENSMUST00000103738
Predicted Effect noncoding transcript
Transcript: ENSMUST00000103739
Predicted Effect probably benign
Transcript: ENSMUST00000103740
AA Change: T82A

PolyPhen 2 Score 0.007 (Sensitivity: 0.96; Specificity: 0.75)
SMART Domains Protein: ENSMUSP00000100459
Gene: ENSMUSG00000076928
AA Change: T82A

DomainStartEndE-ValueType
Pfam:DUF1968 7 88 1.6e-39 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000198398
AA Change: T82A

PolyPhen 2 Score 0.007 (Sensitivity: 0.96; Specificity: 0.75)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110038F14Rik G A 15: 76,834,475 (GRCm39) V124I probably damaging Het
Adamts5 T C 16: 85,660,021 (GRCm39) H757R probably damaging Het
Aen G A 7: 78,557,050 (GRCm39) M299I probably damaging Het
Akap3 A T 6: 126,842,842 (GRCm39) E487V possibly damaging Het
Bicd2 T C 13: 49,531,792 (GRCm39) S271P probably damaging Het
Cfap206 C T 4: 34,721,562 (GRCm39) S162N probably damaging Het
Cma1 A G 14: 56,180,154 (GRCm39) S71P probably benign Het
Cspp1 T C 1: 10,158,370 (GRCm39) Y494H probably damaging Het
Cyp39a1 A G 17: 43,993,913 (GRCm39) K191R probably benign Het
Efr3a G A 15: 65,724,927 (GRCm39) V507I probably benign Het
Fam178b C T 1: 36,603,484 (GRCm39) R489Q possibly damaging Het
Kcnj4 A G 15: 79,368,780 (GRCm39) L400P probably benign Het
Kif27 A G 13: 58,491,907 (GRCm39) Y411H probably damaging Het
Mstn A T 1: 53,101,156 (GRCm39) I78L possibly damaging Het
Nrap T C 19: 56,317,516 (GRCm39) D1377G probably damaging Het
Pramel5 T G 4: 143,997,842 (GRCm39) Y467S probably damaging Het
Prkg1 G A 19: 30,546,743 (GRCm39) probably benign Het
Rbfox1 A C 16: 7,124,307 (GRCm39) S219R possibly damaging Het
Rfng T C 11: 120,674,778 (GRCm39) N71D probably damaging Het
Rp1 T C 1: 4,415,461 (GRCm39) I1884V probably damaging Het
Rptn T A 3: 93,305,483 (GRCm39) Y939N possibly damaging Het
Sart1 A G 19: 5,433,979 (GRCm39) V322A probably benign Het
Shank3 T C 15: 89,433,619 (GRCm39) S1455P probably damaging Het
Smc5 T A 19: 23,208,965 (GRCm39) R703W possibly damaging Het
Sptan1 G A 2: 29,904,185 (GRCm39) probably null Het
Tecta T C 9: 42,306,299 (GRCm39) D43G probably damaging Het
Tmem67 A T 4: 12,054,750 (GRCm39) M685K probably benign Het
Trank1 A G 9: 111,195,861 (GRCm39) N1295S probably damaging Het
Ttc36 T C 9: 44,712,887 (GRCm39) probably null Het
Utp18 A T 11: 93,760,674 (GRCm39) S384T possibly damaging Het
Vmn1r64 C A 7: 5,886,941 (GRCm39) A201S probably benign Het
Vmn2r26 A T 6: 124,038,566 (GRCm39) I714F probably benign Het
Vps54 T A 11: 21,262,268 (GRCm39) V626D probably damaging Het
Wapl T C 14: 34,467,579 (GRCm39) probably benign Het
Yars2 C T 16: 16,124,406 (GRCm39) R338* probably null Het
Other mutations in Trac
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01735:Trac APN 14 54,460,438 (GRCm39) splice site probably benign
alphaless UTSW 14 54,458,148 (GRCm39) nonsense probably null
R6868:Trac UTSW 14 54,458,049 (GRCm39) unclassified probably benign
R7983:Trac UTSW 14 54,458,214 (GRCm39) missense
R8112:Trac UTSW 14 54,460,557 (GRCm39) critical splice donor site probably benign
R9044:Trac UTSW 14 54,458,148 (GRCm39) nonsense probably null
Z1177:Trac UTSW 14 54,458,125 (GRCm39) missense
Z1177:Trac UTSW 14 54,457,996 (GRCm39) missense
Posted On 2013-06-21