Incidental Mutation 'R6666:1700020N01Rik'
List |< first << previous [record 42 of 18487] next >> last >|
ID526981
Institutional Source Beutler Lab
Gene Symbol 1700020N01Rik
Ensembl Gene ENSMUSG00000050844
Gene NameRIKEN cDNA 1700020N01 gene
Synonyms
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.060) question?
Stock #R6666 (G1)
Quality Score174.009
Status Not validated
Chromosome10
Chromosomal Location21593145-21622376 bp(+) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) C to A at 21593329 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000054237 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000057341]
Predicted Effect probably null
Transcript: ENSMUST00000057341
SMART Domains Protein: ENSMUSP00000054237
Gene: ENSMUSG00000050844

DomainStartEndE-ValueType
KRAB 13 70 1.2e-12 SMART
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.3%
  • 20x: 95.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Arhgap24 A G 5: 102,552,297 probably null Het
Atp12a G T 14: 56,373,364 V322L probably benign Het
Capza1 A C 3: 104,828,606 probably null Het
Cela3a A T 4: 137,403,864 S188T probably benign Het
Cplx1 G T 5: 108,520,165 Y123* probably null Het
Ddias A T 7: 92,858,081 D875E probably benign Het
Dnah3 T C 7: 120,070,949 E715G probably benign Het
Fam83e A G 7: 45,727,002 T380A probably benign Het
Fancd2 T C 6: 113,585,509 V1270A probably damaging Het
Foxh1 A G 15: 76,668,413 F367S probably damaging Het
Gpat2 G C 2: 127,431,918 G294R possibly damaging Het
Gprc5a A G 6: 135,079,475 I307V probably benign Het
Gtpbp3 A G 8: 71,490,938 D212G possibly damaging Het
Helb A G 10: 120,084,951 V1029A probably damaging Het
Il22ra1 A T 4: 135,750,461 H281L probably damaging Het
Il2rb TAGTCA TAGTCAGTCA 15: 78,481,834 probably null Het
Il2rb TCA TCAGCCA 15: 78,481,837 probably null Het
Itga3 T C 11: 95,065,826 T170A probably benign Het
Kdm3a T C 6: 71,611,990 E345G probably benign Het
Kif11 T C 19: 37,409,766 I680T probably benign Het
Klhl28 C T 12: 64,943,527 D547N probably benign Het
Limk2 T A 11: 3,360,493 E49D probably damaging Het
Lmbrd2 T A 15: 9,151,569 F120I probably benign Het
Mefv T A 16: 3,707,998 N802Y possibly damaging Het
Ms4a2 C T 19: 11,618,423 S168N probably benign Het
Myct1 T C 10: 5,604,333 S67P probably damaging Het
Myh4 A G 11: 67,251,812 E933G probably damaging Het
Naif1 C A 2: 32,454,851 T189K probably damaging Het
Nppb A G 4: 147,986,006 I11V probably benign Het
Nr3c1 T C 18: 39,487,147 D29G probably damaging Het
Nrcam A G 12: 44,571,555 Y782C probably damaging Het
Olfr1154 T A 2: 87,903,508 H56L probably damaging Het
Olfr366 A T 2: 37,220,319 I277F probably damaging Het
Olfr558 T C 7: 102,709,928 probably null Het
Parp1 A G 1: 180,585,951 T375A probably benign Het
Pcdhgb1 G T 18: 37,681,493 E346* probably null Het
Pds5b G T 5: 150,778,166 S754I probably damaging Het
Scnn1g G A 7: 121,767,388 D603N probably benign Het
Slitrk5 A G 14: 111,680,102 D386G probably damaging Het
Trmt1 T C 8: 84,698,454 L493P probably damaging Het
Vrk1 A G 12: 106,058,651 E262G probably damaging Het
Wfs1 T C 5: 36,967,619 T567A possibly damaging Het
Zbtb11 A T 16: 56,006,252 K846I probably damaging Het
Zfp318 A G 17: 46,409,214 T1113A probably benign Het
Zfp654 A T 16: 64,786,233 S535R probably benign Het
Other mutations in 1700020N01Rik
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03145:1700020N01Rik APN 10 21593438 missense probably damaging 1.00
R0685:1700020N01Rik UTSW 10 21593438 missense probably damaging 1.00
R1186:1700020N01Rik UTSW 10 21621652 missense probably benign 0.01
R1626:1700020N01Rik UTSW 10 21621672 missense possibly damaging 0.52
R2507:1700020N01Rik UTSW 10 21621782 utr 3 prime probably benign
R6702:1700020N01Rik UTSW 10 21621659 nonsense probably null
R6703:1700020N01Rik UTSW 10 21621659 nonsense probably null
Predicted Primers PCR Primer
(F):5'- GCGGAATTTTCGGTGACATC -3'
(R):5'- GGAGCTTCTGAGTGTCATCGAG -3'

Sequencing Primer
(F):5'- GTGACATCACCACAGAAAGTTCG -3'
(R):5'- CTTCTGAGTGTCATCGAGGAGACC -3'
Posted On2018-07-23