Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01140:Trib1'

52856

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Trib1

Ensembl Gene

ENSMUSG00000032501

Gene Name

tribbles pseudokinase 1

Synonyms

A530090O15Rik, Trb1

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL01140

Quality Score

Status

Chromosome

Chromosomal Location

59520503-59528948 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 59523476 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 170 (Y170C)

Ref Sequence

ENSEMBL: ENSMUSP00000112828 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000067543] [ENSMUST00000118228]

AlphaFold

Q8K4K4

Predicted Effect

probably damaging
Transcript: ENSMUST00000067543
AA Change: Y170C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000068834
Gene: ENSMUSG00000032501
AA Change: Y170C

Domain	Start	End	E-Value	Type
low complexity region	61	82	N/A	INTRINSIC
Pfam:Pkinase	105	338	1.1e-33	PFAM
Pfam:Pkinase_Tyr	120	335	2.1e-15	PFAM
Pfam:Kinase-like	124	326	1.4e-8	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000118228
AA Change: Y170C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000112828
Gene: ENSMUSG00000032501
AA Change: Y170C

Domain	Start	End	E-Value	Type
low complexity region	61	82	N/A	INTRINSIC
Pfam:Pkinase	104	218	7.9e-12	PFAM

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Macrophages from mice homozygous for a knock-out allele exhibit impaired IL12 response to LPS, MALP-1, or CpG DNA. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 43 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Afm	A	G	5: 90,672,726 (GRCm39)	E187G	probably damaging	Het
Asap2	T	C	12: 21,256,317 (GRCm39)	V205A	probably damaging	Het
Atg16l1	A	G	1: 87,702,575 (GRCm39)	I279V	probably benign	Het
Atp2b2	C	T	6: 113,766,932 (GRCm39)	V436I	possibly damaging	Het
Cald1	T	A	6: 34,739,196 (GRCm39)	S640T	possibly damaging	Het
Cdc23	A	G	18: 34,769,385 (GRCm39)	Y460H	probably benign	Het
Cenpk	T	A	13: 104,372,742 (GRCm39)		probably benign	Het
Ctss	A	G	3: 95,446,036 (GRCm39)	E52G	probably damaging	Het
Cuzd1	A	T	7: 130,913,523 (GRCm39)	C365S	probably damaging	Het
Cyp2c55	T	C	19: 39,007,093 (GRCm39)	L163P	probably benign	Het
Cyp4f37	T	C	17: 32,848,027 (GRCm39)	S182P	probably benign	Het
Flt4	G	T	11: 49,525,770 (GRCm39)	E740*	probably null	Het
Galntl6	T	A	8: 58,411,356 (GRCm39)	R291S	probably damaging	Het
Hydin	G	A	8: 111,124,694 (GRCm39)	V568I	probably benign	Het
Ift70a1	A	G	2: 75,810,259 (GRCm39)	V608A	probably benign	Het
Kcnab3	A	G	11: 69,220,705 (GRCm39)	K145R	probably benign	Het
Lama1	T	C	17: 68,109,928 (GRCm39)	V2183A	probably benign	Het
Lrmda	C	T	14: 22,646,585 (GRCm39)	A75V	possibly damaging	Het
Mbtd1	A	G	11: 93,815,258 (GRCm39)	E282G	probably damaging	Het
Muc19	A	T	15: 91,783,593 (GRCm39)		noncoding transcript	Het
Mug1	A	G	6: 121,859,693 (GRCm39)	T1231A	probably benign	Het
Nkpd1	A	G	7: 19,257,387 (GRCm39)	T389A	possibly damaging	Het
Nudt19	A	G	7: 35,247,336 (GRCm39)	*358Q	probably null	Het
Nup160	G	T	2: 90,530,909 (GRCm39)	M522I	possibly damaging	Het
Obsl1	T	A	1: 75,466,400 (GRCm39)		probably benign	Het
Or4m1	T	A	14: 50,557,732 (GRCm39)	I187F	probably damaging	Het
Or5ak24	T	C	2: 85,260,484 (GRCm39)	T230A	probably benign	Het
Or5b119	G	A	19: 13,457,151 (GRCm39)	T137I	possibly damaging	Het
Osbpl10	C	T	9: 115,005,070 (GRCm39)	P341S	probably benign	Het
Papola	C	A	12: 105,775,856 (GRCm39)	C7*	probably null	Het
Pld1	C	A	3: 28,132,386 (GRCm39)	L525I	probably benign	Het
Prom2	T	C	2: 127,373,125 (GRCm39)		probably benign	Het
Psmb5	G	A	14: 54,855,264 (GRCm39)	T62I	possibly damaging	Het
Sag	A	G	1: 87,751,086 (GRCm39)	E184G	probably benign	Het
Slc16a10	T	C	10: 39,952,921 (GRCm39)	Y191C	probably damaging	Het
Slc22a22	T	C	15: 57,126,734 (GRCm39)	T93A	probably damaging	Het
Ssx2ip	A	G	3: 146,133,598 (GRCm39)	Y231C	probably benign	Het
Trmt10a	G	A	3: 137,862,459 (GRCm39)		probably benign	Het
Troap	G	T	15: 98,980,027 (GRCm39)	Q402H	probably damaging	Het
Vmn2r70	G	A	7: 85,214,379 (GRCm39)	Q258*	probably null	Het
Zfp128	A	G	7: 12,624,949 (GRCm39)	Y439C	probably benign	Het
Zmym1	A	G	4: 126,943,435 (GRCm39)	F318L	probably damaging	Het
Zswim2	A	G	2: 83,745,672 (GRCm39)	S589P	probably benign	Het

Other mutations in Trib1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01648:Trib1	APN	15	59,526,350 (GRCm39)	missense	probably benign	0.38
IGL02267:Trib1	APN	15	59,523,449 (GRCm39)	missense	probably damaging	0.98
IGL03018:Trib1	APN	15	59,526,333 (GRCm39)	missense	probably damaging	1.00
Dibble	UTSW	15	59,526,324 (GRCm39)	missense	probably damaging	1.00
lawrence	UTSW	15	59,521,264 (GRCm39)	missense	probably benign
Topcat	UTSW	15	59,523,487 (GRCm39)	nonsense	probably null
R1994:Trib1	UTSW	15	59,521,192 (GRCm39)	missense	possibly damaging	0.70
R2073:Trib1	UTSW	15	59,526,189 (GRCm39)	missense	probably damaging	1.00
R2407:Trib1	UTSW	15	59,526,449 (GRCm39)	missense	probably benign	0.00
R3709:Trib1	UTSW	15	59,526,210 (GRCm39)	missense	probably damaging	1.00
R5759:Trib1	UTSW	15	59,526,350 (GRCm39)	missense	probably benign
R5986:Trib1	UTSW	15	59,526,451 (GRCm39)	splice site	probably null
R6083:Trib1	UTSW	15	59,526,324 (GRCm39)	missense	probably damaging	1.00
R6084:Trib1	UTSW	15	59,526,324 (GRCm39)	missense	probably damaging	1.00
R6086:Trib1	UTSW	15	59,526,324 (GRCm39)	missense	probably damaging	1.00
R6112:Trib1	UTSW	15	59,523,487 (GRCm39)	nonsense	probably null
R6113:Trib1	UTSW	15	59,523,487 (GRCm39)	nonsense	probably null
R6316:Trib1	UTSW	15	59,521,264 (GRCm39)	missense	probably benign
R7288:Trib1	UTSW	15	59,526,471 (GRCm39)	missense	probably benign
R7663:Trib1	UTSW	15	59,523,562 (GRCm39)	missense	probably damaging	1.00
R7744:Trib1	UTSW	15	59,526,512 (GRCm39)	missense	probably benign	0.04
R8061:Trib1	UTSW	15	59,523,404 (GRCm39)	missense	probably damaging	0.97

Posted On

2013-06-21