Incidental Mutation 'R6739:Or1x6'
| ID |
530360 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or1x6
|
| Ensembl Gene |
ENSMUSG00000057890 |
| Gene Name |
olfactory receptor family 1 subfamily X member 6 |
| Synonyms |
MOR126-2, Olfr1375, Olfr1375-ps1, GA_x6K02T2QP88-4389999-4389056 |
| MMRRC Submission |
044857-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.062)
|
| Stock # |
R6739 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
11 |
| Chromosomal Location |
50938936-50939877 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 50939564 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Glutamic Acid
at position 210
(V210E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000144756
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000073543]
|
| AlphaFold |
A0A0N4SUP0 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000073543
AA Change: V210E
PolyPhen 2
Score 0.967 (Sensitivity: 0.77; Specificity: 0.95)
|
| SMART Domains |
Protein: ENSMUSP00000073233
Gene: ENSMUSG00000057890
AA Change: V210E
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
33 |
309 |
6.4e-60 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
37 |
306 |
3.9e-6 |
PFAM |
|
Pfam:7tm_1
|
43 |
291 |
9.5e-26 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000073543
AA Change: V210E
PolyPhen 2
Score 0.967 (Sensitivity: 0.77; Specificity: 0.95)
|
| SMART Domains |
Protein: ENSMUSP00000144756
Gene: ENSMUSG00000057890
AA Change: V210E
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
33 |
309 |
6.4e-60 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
37 |
306 |
3.9e-6 |
PFAM |
|
Pfam:7tm_1
|
43 |
291 |
9.5e-26 |
PFAM |
|
| Meta Mutation Damage Score |
0.6329 |
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.5%
- 20x: 96.0%
|
| Validation Efficiency |
97% (33/34) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adcy9 |
A |
G |
16: 4,236,658 (GRCm39) |
V14A |
probably benign |
Het |
| Ank2 |
A |
T |
3: 126,873,643 (GRCm39) |
N59K |
probably damaging |
Het |
| Ano4 |
T |
C |
10: 88,863,114 (GRCm39) |
Y286C |
probably damaging |
Het |
| Arhgap21 |
G |
A |
2: 20,885,543 (GRCm39) |
H545Y |
possibly damaging |
Het |
| Arid1a |
T |
A |
4: 133,414,937 (GRCm39) |
S1152C |
unknown |
Het |
| Cfap73 |
T |
C |
5: 120,768,258 (GRCm39) |
T167A |
probably benign |
Het |
| Ctbs |
A |
T |
3: 146,165,254 (GRCm39) |
|
probably null |
Het |
| Dmgdh |
T |
A |
13: 93,857,123 (GRCm39) |
N742K |
probably benign |
Het |
| Dmxl1 |
T |
C |
18: 50,011,313 (GRCm39) |
S1157P |
probably benign |
Het |
| Dnm3 |
T |
C |
1: 162,305,352 (GRCm39) |
N14S |
probably damaging |
Het |
| Dpp4 |
C |
T |
2: 62,217,439 (GRCm39) |
V53I |
probably benign |
Het |
| Etl4 |
A |
G |
2: 20,718,246 (GRCm39) |
N329S |
probably damaging |
Het |
| Fbxw25 |
A |
G |
9: 109,480,699 (GRCm39) |
V327A |
probably benign |
Het |
| Gsg1 |
T |
A |
6: 135,214,612 (GRCm39) |
Q299L |
probably damaging |
Het |
| Igsf23 |
A |
G |
7: 19,678,673 (GRCm39) |
L39P |
probably damaging |
Het |
| Il17rd |
A |
G |
14: 26,821,488 (GRCm39) |
R261G |
possibly damaging |
Het |
| Krt75 |
C |
T |
15: 101,479,503 (GRCm39) |
D276N |
probably benign |
Het |
| Lox |
T |
C |
18: 52,660,031 (GRCm39) |
T268A |
possibly damaging |
Het |
| Mroh4 |
T |
C |
15: 74,481,568 (GRCm39) |
S825G |
probably benign |
Het |
| Nlrp9c |
T |
C |
7: 26,084,850 (GRCm39) |
D243G |
probably damaging |
Het |
| Or10a5 |
T |
C |
7: 106,636,018 (GRCm39) |
Y219H |
probably damaging |
Het |
| Picalm |
C |
A |
7: 89,825,916 (GRCm39) |
T131N |
probably damaging |
Het |
| Pitpnm1 |
T |
A |
19: 4,160,522 (GRCm39) |
L781H |
probably damaging |
Het |
| Proz |
A |
T |
8: 13,123,451 (GRCm39) |
I241F |
possibly damaging |
Het |
| Rb1cc1 |
A |
G |
1: 6,304,454 (GRCm39) |
D67G |
probably damaging |
Het |
| Rnf213 |
T |
A |
11: 119,333,097 (GRCm39) |
C2769S |
probably damaging |
Het |
| Rsf1 |
G |
GACGGCGGCT |
7: 97,229,116 (GRCm39) |
|
probably benign |
Het |
| Scn8a |
T |
C |
15: 100,913,836 (GRCm39) |
I1076T |
possibly damaging |
Het |
| Snrnp70 |
A |
T |
7: 45,036,843 (GRCm39) |
D100E |
probably damaging |
Het |
| Triobp |
T |
A |
15: 78,850,566 (GRCm39) |
L240Q |
possibly damaging |
Het |
| Vmn2r5 |
A |
G |
3: 64,398,637 (GRCm39) |
S781P |
probably damaging |
Het |
| Zfp451 |
A |
G |
1: 33,842,675 (GRCm39) |
|
probably benign |
Het |
| Zfta |
C |
T |
19: 7,398,712 (GRCm39) |
R243* |
probably null |
Het |
|
| Other mutations in Or1x6 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00092:Or1x6
|
APN |
11 |
50,939,227 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0268:Or1x6
|
UTSW |
11 |
50,939,768 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0462:Or1x6
|
UTSW |
11 |
50,939,336 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0478:Or1x6
|
UTSW |
11 |
50,939,539 (GRCm39) |
missense |
probably benign |
0.03 |
|
R0839:Or1x6
|
UTSW |
11 |
50,939,254 (GRCm39) |
missense |
probably benign |
0.06 |
|
R2517:Or1x6
|
UTSW |
11 |
50,939,300 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4688:Or1x6
|
UTSW |
11 |
50,939,815 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4781:Or1x6
|
UTSW |
11 |
50,939,307 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5396:Or1x6
|
UTSW |
11 |
50,939,297 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6163:Or1x6
|
UTSW |
11 |
50,939,595 (GRCm39) |
nonsense |
probably null |
|
|
R7344:Or1x6
|
UTSW |
11 |
50,939,122 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7994:Or1x6
|
UTSW |
11 |
50,938,967 (GRCm39) |
missense |
probably benign |
0.31 |
|
R8054:Or1x6
|
UTSW |
11 |
50,939,090 (GRCm39) |
missense |
probably benign |
0.22 |
|
R8129:Or1x6
|
UTSW |
11 |
50,939,210 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8940:Or1x6
|
UTSW |
11 |
50,939,455 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9005:Or1x6
|
UTSW |
11 |
50,938,938 (GRCm39) |
start codon destroyed |
probably null |
0.18 |
|
R9008:Or1x6
|
UTSW |
11 |
50,938,938 (GRCm39) |
start codon destroyed |
probably null |
0.18 |
|
R9016:Or1x6
|
UTSW |
11 |
50,938,938 (GRCm39) |
start codon destroyed |
probably null |
0.18 |
|
R9018:Or1x6
|
UTSW |
11 |
50,938,938 (GRCm39) |
start codon destroyed |
probably null |
0.18 |
|
R9028:Or1x6
|
UTSW |
11 |
50,939,660 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9051:Or1x6
|
UTSW |
11 |
50,938,938 (GRCm39) |
start codon destroyed |
probably null |
0.18 |
|
R9052:Or1x6
|
UTSW |
11 |
50,938,938 (GRCm39) |
start codon destroyed |
probably null |
0.18 |
|
R9203:Or1x6
|
UTSW |
11 |
50,939,161 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R9364:Or1x6
|
UTSW |
11 |
50,939,223 (GRCm39) |
nonsense |
probably null |
|
|
R9376:Or1x6
|
UTSW |
11 |
50,939,662 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9554:Or1x6
|
UTSW |
11 |
50,939,223 (GRCm39) |
nonsense |
probably null |
|
|
R9641:Or1x6
|
UTSW |
11 |
50,939,207 (GRCm39) |
missense |
probably benign |
0.34 |
|
Z1176:Or1x6
|
UTSW |
11 |
50,939,662 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1177:Or1x6
|
UTSW |
11 |
50,939,353 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGCCATATGCTACCCACTACAG -3'
(R):5'- TGGCTACTGAGACCTGGATG -3'
Sequencing Primer
(F):5'- GTGTGGATGTGCTCTGCCC -3'
(R):5'- CCTGGATGGAGAAGGAGCCC -3'
|
| Posted On |
2018-08-01 |
Incidental Mutation