Mutagenetix > Incidental Mutation

Incidental Mutation 'R6750:Spata31e5'

530671

Institutional Source

Beutler Lab

Gene Symbol

Spata31e5

Ensembl Gene

ENSMUSG00000048411

Gene Name

spermatogenesis associated 31 subfamily E member 5

Synonyms

Gm597, LOC210962

MMRRC Submission

044867-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.059) question?

Stock #

R6750 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

28815203-28819333 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 28816495 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Aspartic acid at position 512 (E512D)

Ref Sequence

ENSEMBL: ENSMUSP00000058140 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000059937]

AlphaFold

E9Q8J5

Predicted Effect

probably damaging
Transcript: ENSMUST00000059937
AA Change: E512D

PolyPhen 2 Score 0.984 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000058140
Gene: ENSMUSG00000048411
AA Change: E512D

Domain	Start	End	E-Value	Type
transmembrane domain	13	35	N/A	INTRINSIC
low complexity region	112	129	N/A	INTRINSIC
Pfam:FAM75	137	472	8.1e-14	PFAM
low complexity region	664	675	N/A	INTRINSIC
internal_repeat_1	718	807	1.4e-5	PROSPERO
internal_repeat_1	807	894	1.4e-5	PROSPERO

Coding Region Coverage

1x: 99.9%
3x: 99.5%
10x: 97.6%
20x: 92.7%

Validation Efficiency

100% (75/75)

Allele List at MGI

Other mutations in this stock

Total: 73 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adal	A	T	2: 120,973,130 (GRCm39)	L62F	probably damaging	Het
Akap13	C	T	7: 75,389,206 (GRCm39)	P2375S	probably benign	Het
Apob	T	A	12: 8,047,853 (GRCm39)	L931Q	probably damaging	Het
Arcn1	A	G	9: 44,661,691 (GRCm39)	V391A	possibly damaging	Het
Ccdc162	A	T	10: 41,437,222 (GRCm39)	I1729N	possibly damaging	Het
Cd24a	T	C	10: 43,458,721 (GRCm39)	L86P	unknown	Het
Cdcp3	T	A	7: 130,889,974 (GRCm39)		probably benign	Het
Churc1	C	A	12: 76,822,405 (GRCm39)	H71Q	probably damaging	Het
Clcn3	A	G	8: 61,367,809 (GRCm39)	L780P	possibly damaging	Het
Cldn17	C	T	16: 88,303,195 (GRCm39)	G178E	possibly damaging	Het
Cmah	A	G	13: 24,648,235 (GRCm39)	Y345C	probably damaging	Het
Cntnap5b	C	T	1: 100,202,224 (GRCm39)	S357L	probably damaging	Het
Col6a6	A	G	9: 105,660,879 (GRCm39)	I410T	probably damaging	Het
Crmp1	T	C	5: 37,422,666 (GRCm39)		probably null	Het
Csmd2	A	C	4: 128,091,018 (GRCm39)	N186H	possibly damaging	Het
Cyp1a1	A	T	9: 57,607,539 (GRCm39)	M56L	probably benign	Het
D2hgdh	G	C	1: 93,754,129 (GRCm39)	R56P	probably benign	Het
Dapk2	A	G	9: 66,128,034 (GRCm39)	E104G	probably damaging	Het
Dld	T	C	12: 31,382,213 (GRCm39)	N498S	probably benign	Het
Dyrk4	G	T	6: 126,875,918 (GRCm39)	Q106K	probably benign	Het
Eif2b4	T	C	5: 31,347,304 (GRCm39)	I333V	probably damaging	Het
F5	A	G	1: 164,021,076 (GRCm39)	T1184A	possibly damaging	Het
Fbxl6	C	T	15: 76,422,612 (GRCm39)	G102D	probably damaging	Het
Foxa1	C	T	12: 57,589,396 (GRCm39)	G275R	probably benign	Het
Fryl	A	G	5: 73,179,575 (GRCm39)	I2944T	probably damaging	Het
Gna15	T	C	10: 81,350,117 (GRCm39)	D95G	probably benign	Het
Greb1	T	A	12: 16,738,584 (GRCm39)	M1460L	probably benign	Het
Herc1	TCCC	TCC	9: 66,408,470 (GRCm39)		probably null	Het
Herc2	T	C	7: 55,747,195 (GRCm39)	I444T	probably damaging	Het
Ifngr1	T	A	10: 19,485,099 (GRCm39)	M366K	probably benign	Het
Krt27	C	T	11: 99,239,806 (GRCm39)	E253K	probably damaging	Het
Mical2	C	T	7: 111,981,046 (GRCm39)	T406I	probably damaging	Het
Mocs2	T	G	13: 114,962,784 (GRCm39)	D156E	probably damaging	Het
Mprip	A	T	11: 59,586,957 (GRCm39)	K43N	probably damaging	Het
Myo5b	A	T	18: 74,750,106 (GRCm39)	T190S	possibly damaging	Het
Naa25	C	T	5: 121,546,372 (GRCm39)	T86M	probably damaging	Het
Ncam1	T	C	9: 49,478,639 (GRCm39)	D163G	probably damaging	Het
Nlrp4f	A	T	13: 65,329,468 (GRCm39)	Y908*	probably null	Het
Nlrp9b	T	A	7: 19,757,159 (GRCm39)	L132*	probably null	Het
Nrg1	A	C	8: 32,308,124 (GRCm39)	S679A	probably damaging	Het
Or1j1	C	A	2: 36,702,954 (GRCm39)	R50M	possibly damaging	Het
Or52p1	C	T	7: 104,267,320 (GRCm39)	R145C	probably damaging	Het
Paqr9	A	T	9: 95,443,050 (GRCm39)	T347S	probably damaging	Het
Pcdhb21	T	C	18: 37,647,501 (GRCm39)	L210P	probably damaging	Het
Pdzd7	T	G	19: 45,016,187 (GRCm39)	D978A	probably benign	Het
Phf8-ps	A	T	17: 33,285,372 (GRCm39)	S477T	possibly damaging	Het
Pkd1l1	A	T	11: 8,923,217 (GRCm39)	S17T	unknown	Het
Plcz1	T	C	6: 139,974,164 (GRCm39)	K93E	possibly damaging	Het
Pom121l2	G	C	13: 22,166,107 (GRCm39)	R126P	probably damaging	Het
Prkg1	C	T	19: 31,741,961 (GRCm39)	E88K	probably benign	Het
Psme4	A	T	11: 30,803,203 (GRCm39)	D15V	probably damaging	Het
Ptprf	A	G	4: 118,088,928 (GRCm39)	V625A	probably benign	Het
Rab27a	G	A	9: 72,992,290 (GRCm39)	S106N	probably damaging	Het
Rasa4	A	G	5: 136,129,802 (GRCm39)	T261A	probably benign	Het
Sardh	T	C	2: 27,118,269 (GRCm39)	D487G	probably benign	Het
Sec16a	A	G	2: 26,330,030 (GRCm39)	Y662H	probably benign	Het
Sema3d	T	A	5: 12,635,067 (GRCm39)	L711*	probably null	Het
Septin14	T	A	5: 129,773,181 (GRCm39)	Y152F	probably damaging	Het
Smc5	A	G	19: 23,220,004 (GRCm39)	L411P	probably damaging	Het
Spg7	T	A	8: 123,800,650 (GRCm39)	V39E	probably damaging	Het
Tas2r117	A	G	6: 132,779,817 (GRCm39)		probably benign	Het
Tle1	A	T	4: 72,040,687 (GRCm39)	I631N	probably damaging	Het
Tmed3	T	A	9: 89,581,843 (GRCm39)	S207C	probably damaging	Het
Tmem59l	G	A	8: 70,939,022 (GRCm39)	P51S	probably benign	Het
Trpc3	A	G	3: 36,678,542 (GRCm39)	Y848H	probably damaging	Het
Tsen2	T	C	6: 115,526,881 (GRCm39)	F66S	probably damaging	Het
Ttll5	T	A	12: 86,003,384 (GRCm39)	S216R	probably damaging	Het
Usp22	A	T	11: 61,048,042 (GRCm39)	V426E	probably damaging	Het
Vmn2r76	T	C	7: 85,875,114 (GRCm39)	N621S	probably damaging	Het
Wdr75	A	G	1: 45,856,539 (GRCm39)	T521A	probably damaging	Het
Wrnip1	T	A	13: 32,986,739 (GRCm39)	D173E	probably damaging	Het
Zfp317	G	A	9: 19,559,100 (GRCm39)	G438D	probably damaging	Het
Zscan10	T	A	17: 23,826,164 (GRCm39)	S109T	possibly damaging	Het

Other mutations in Spata31e5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00740:Spata31e5	APN	1	28,817,732 (GRCm39)	missense	possibly damaging	0.94
IGL00885:Spata31e5	APN	1	28,815,926 (GRCm39)	missense	unknown
IGL01296:Spata31e5	APN	1	28,816,137 (GRCm39)	missense	probably benign	0.23
IGL01476:Spata31e5	APN	1	28,816,534 (GRCm39)	missense	probably benign	0.04
IGL02125:Spata31e5	APN	1	28,815,419 (GRCm39)	missense	possibly damaging	0.91
IGL02410:Spata31e5	APN	1	28,817,712 (GRCm39)	missense	probably benign	0.25
IGL02982:Spata31e5	APN	1	28,817,135 (GRCm39)	missense	probably damaging	1.00
IGL03031:Spata31e5	APN	1	28,817,664 (GRCm39)	missense	probably benign	0.03
IGL03267:Spata31e5	APN	1	28,816,202 (GRCm39)	missense	probably damaging	1.00
R0294:Spata31e5	UTSW	1	28,817,744 (GRCm39)	missense	probably benign	0.00
R0433:Spata31e5	UTSW	1	28,816,423 (GRCm39)	nonsense	probably null
R0485:Spata31e5	UTSW	1	28,817,223 (GRCm39)	missense	probably damaging	1.00
R0645:Spata31e5	UTSW	1	28,816,011 (GRCm39)	missense	probably damaging	0.99
R0744:Spata31e5	UTSW	1	28,816,902 (GRCm39)	missense	possibly damaging	0.46
R0836:Spata31e5	UTSW	1	28,816,902 (GRCm39)	missense	possibly damaging	0.46
R1036:Spata31e5	UTSW	1	28,816,883 (GRCm39)	missense	probably benign	0.01
R1302:Spata31e5	UTSW	1	28,815,421 (GRCm39)	missense	probably benign	0.00
R1394:Spata31e5	UTSW	1	28,815,890 (GRCm39)	missense	possibly damaging	0.61
R1395:Spata31e5	UTSW	1	28,815,890 (GRCm39)	missense	possibly damaging	0.61
R1514:Spata31e5	UTSW	1	28,817,829 (GRCm39)	missense	possibly damaging	0.83
R1535:Spata31e5	UTSW	1	28,816,505 (GRCm39)	missense	probably damaging	1.00
R2004:Spata31e5	UTSW	1	28,816,260 (GRCm39)	missense	probably damaging	1.00
R2021:Spata31e5	UTSW	1	28,817,234 (GRCm39)	missense	probably damaging	0.98
R2022:Spata31e5	UTSW	1	28,817,234 (GRCm39)	missense	probably damaging	0.98
R3115:Spata31e5	UTSW	1	28,815,410 (GRCm39)	missense	possibly damaging	0.92
R3615:Spata31e5	UTSW	1	28,815,656 (GRCm39)	missense	probably benign	0.26
R3616:Spata31e5	UTSW	1	28,815,656 (GRCm39)	missense	probably benign	0.26
R3862:Spata31e5	UTSW	1	28,816,722 (GRCm39)	missense	probably damaging	0.98
R4067:Spata31e5	UTSW	1	28,816,712 (GRCm39)	missense	probably damaging	0.98
R4119:Spata31e5	UTSW	1	28,817,054 (GRCm39)	missense	probably damaging	0.99
R4415:Spata31e5	UTSW	1	28,816,214 (GRCm39)	missense	probably benign	0.01
R5010:Spata31e5	UTSW	1	28,816,943 (GRCm39)	missense	possibly damaging	0.52
R5109:Spata31e5	UTSW	1	28,816,636 (GRCm39)	missense	possibly damaging	0.46
R5122:Spata31e5	UTSW	1	28,819,141 (GRCm39)	missense	probably benign	0.00
R5533:Spata31e5	UTSW	1	28,817,163 (GRCm39)	missense	probably damaging	1.00
R6085:Spata31e5	UTSW	1	28,817,308 (GRCm39)	missense	possibly damaging	0.55
R6116:Spata31e5	UTSW	1	28,817,780 (GRCm39)	missense	probably benign	0.01
R6757:Spata31e5	UTSW	1	28,819,191 (GRCm39)	missense	probably damaging	0.98
R6774:Spata31e5	UTSW	1	28,815,974 (GRCm39)	missense	probably benign	0.00
R7156:Spata31e5	UTSW	1	28,815,848 (GRCm39)	missense	possibly damaging	0.53
R7365:Spata31e5	UTSW	1	28,819,233 (GRCm39)	missense	probably benign	0.04
R7739:Spata31e5	UTSW	1	28,816,689 (GRCm39)	missense	possibly damaging	0.72
R7996:Spata31e5	UTSW	1	28,817,487 (GRCm39)	missense	probably damaging	0.98
R8082:Spata31e5	UTSW	1	28,816,579 (GRCm39)	missense	probably benign	0.08
R8281:Spata31e5	UTSW	1	28,817,225 (GRCm39)	missense	possibly damaging	0.77
R8514:Spata31e5	UTSW	1	28,817,586 (GRCm39)	missense	probably damaging	1.00
R8944:Spata31e5	UTSW	1	28,816,155 (GRCm39)	missense	probably benign	0.00
R9042:Spata31e5	UTSW	1	28,816,037 (GRCm39)	missense	possibly damaging	0.72
R9101:Spata31e5	UTSW	1	28,815,740 (GRCm39)	missense	probably benign	0.04
R9106:Spata31e5	UTSW	1	28,815,975 (GRCm39)	missense	probably benign	0.00
R9173:Spata31e5	UTSW	1	28,816,430 (GRCm39)	missense	probably benign	0.22
R9596:Spata31e5	UTSW	1	28,815,688 (GRCm39)	missense	probably benign	0.07
R9632:Spata31e5	UTSW	1	28,817,120 (GRCm39)	missense	probably benign	0.20
R9656:Spata31e5	UTSW	1	28,816,536 (GRCm39)	missense	probably benign	0.02
R9659:Spata31e5	UTSW	1	28,816,536 (GRCm39)	missense	probably benign	0.02
R9661:Spata31e5	UTSW	1	28,816,536 (GRCm39)	missense	probably benign	0.02
R9663:Spata31e5	UTSW	1	28,816,536 (GRCm39)	missense	probably benign	0.02
R9710:Spata31e5	UTSW	1	28,817,120 (GRCm39)	missense	probably benign	0.20

Predicted Primers

PCR Primer
(F):5'- TCCTGAAACCACATGCTCAG -3'
(R):5'- TGAACAGCATGCAGTTTCCC -3'

Sequencing Primer
(F):5'- AGACATCTTCCATGGTGCATG -3'
(R):5'- TTTCCCGAGAAACACAGAATATTGC -3'

Posted On

2018-08-01