Incidental Mutation 'R6753:Cmtr2'
ID 530899
Institutional Source Beutler Lab
Gene Symbol Cmtr2
Ensembl Gene ENSMUSG00000046441
Gene Name cap methyltransferase 2
Synonyms Ftsjd1, C730036L12Rik
MMRRC Submission 044870-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R6753 (G1)
Quality Score 225.009
Status Validated
Chromosome 8
Chromosomal Location 110942297-110951118 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 110949611 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 640 (D640E)
Ref Sequence ENSEMBL: ENSMUSP00000060558 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000056972] [ENSMUST00000189685]
AlphaFold Q8BWQ4
Predicted Effect probably damaging
Transcript: ENSMUST00000056972
AA Change: D640E

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000060558
Gene: ENSMUSG00000046441
AA Change: D640E

DomainStartEndE-ValueType
Pfam:FtsJ 110 320 1.7e-28 PFAM
low complexity region 550 559 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000189685
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 98.3%
  • 20x: 95.1%
Validation Efficiency 99% (68/69)
Allele List at MGI
Other mutations in this stock
Total: 64 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aatk G A 11: 119,900,977 (GRCm39) P1083S probably benign Het
Abcb5 T A 12: 118,908,641 (GRCm39) N101I possibly damaging Het
Adrb2 A G 18: 62,312,624 (GRCm39) V67A possibly damaging Het
Agk T A 6: 40,345,504 (GRCm39) probably null Het
Akap10 A T 11: 61,777,603 (GRCm39) M586K probably damaging Het
Akt3 A T 1: 176,877,756 (GRCm39) Y337* probably null Het
Armc1 A G 3: 19,198,562 (GRCm39) F133L possibly damaging Het
Bank1 T C 3: 135,799,069 (GRCm39) E424G probably damaging Het
Cacna1a A G 8: 85,306,834 (GRCm39) E1363G probably damaging Het
Cacna1d C A 14: 29,764,743 (GRCm39) A2076S probably damaging Het
Ccdc73 T A 2: 104,821,869 (GRCm39) L606* probably null Het
Ccdc8 C T 7: 16,730,562 (GRCm39) Q684* probably null Het
Ces1b T A 8: 93,793,648 (GRCm39) K314* probably null Het
Ces1e T A 8: 93,941,756 (GRCm39) N238I probably damaging Het
Chd4 A G 6: 125,091,263 (GRCm39) N1238S probably benign Het
Col7a1 C T 9: 108,787,196 (GRCm39) T559I unknown Het
Comt T C 16: 18,226,771 (GRCm39) K205R probably benign Het
Dbp A T 7: 45,357,828 (GRCm39) E232V probably damaging Het
Dcbld2 A G 16: 58,276,493 (GRCm39) T470A possibly damaging Het
Eml6 T A 11: 29,704,987 (GRCm39) D1519V probably damaging Het
Evpl T A 11: 116,128,732 (GRCm39) H31L possibly damaging Het
Exoc1 T A 5: 76,711,186 (GRCm39) I86N probably damaging Het
Fat3 C T 9: 15,826,357 (GRCm39) E4532K possibly damaging Het
Fgfr3 T C 5: 33,889,503 (GRCm39) S301P probably benign Het
Gas2l1 C T 11: 5,014,254 (GRCm39) V69I probably damaging Het
Gm2042 T A 12: 87,924,854 (GRCm39) I107K probably damaging Het
Gucy1b1 T C 3: 81,947,054 (GRCm39) D385G probably null Het
Ints1 T A 5: 139,750,930 (GRCm39) E824D probably damaging Het
Itfg1 T C 8: 86,561,707 (GRCm39) D142G probably benign Het
Jaml A G 9: 45,018,677 (GRCm39) N359D probably benign Het
Kcnh7 T A 2: 62,680,721 (GRCm39) I289L probably benign Het
Klf12 G A 14: 100,347,212 (GRCm39) Q40* probably null Het
Mcm4 A C 16: 15,447,226 (GRCm39) N579K possibly damaging Het
Mfsd2b A T 12: 4,917,358 (GRCm39) F179I possibly damaging Het
Mmp11 C T 10: 75,764,208 (GRCm39) V86M probably damaging Het
Mogs T C 6: 83,092,863 (GRCm39) V101A probably damaging Het
Narf T A 11: 121,133,452 (GRCm39) H84Q probably benign Het
Or5ak4 C A 2: 85,162,142 (GRCm39) M33I probably benign Het
Otog A C 7: 45,898,495 (GRCm39) E204D probably benign Het
Parp8 G A 13: 117,031,651 (GRCm39) H354Y possibly damaging Het
Pcnx1 C A 12: 82,011,254 (GRCm39) D1238E probably damaging Het
Pi4ka A G 16: 17,194,846 (GRCm39) L184P possibly damaging Het
Pkd1l3 C T 8: 110,351,081 (GRCm39) T642I probably damaging Het
Pkhd1l1 G A 15: 44,453,059 (GRCm39) E3995K probably benign Het
Prdm9 A T 17: 15,765,218 (GRCm39) Y521N probably benign Het
Prex2 A G 1: 11,254,680 (GRCm39) S1105G probably damaging Het
Prss35 T A 9: 86,638,153 (GRCm39) F308I probably damaging Het
Rab22a C T 2: 173,542,848 (GRCm39) A167V probably benign Het
Rims2 A G 15: 39,430,369 (GRCm39) Q871R possibly damaging Het
Rorb A T 19: 18,934,611 (GRCm39) M253K probably benign Het
Ryr3 T C 2: 112,482,955 (GRCm39) D4269G probably damaging Het
Snx11 T C 11: 96,660,732 (GRCm39) probably benign Het
Son A G 16: 91,454,076 (GRCm39) Q941R probably damaging Het
Sptbn2 G T 19: 4,797,813 (GRCm39) R1880L probably benign Het
Sun1 G A 5: 139,201,014 (GRCm39) probably null Het
Tprn A G 2: 25,154,050 (GRCm39) R451G probably benign Het
Trbv30 T A 6: 41,258,311 (GRCm39) M1K probably null Het
Ttn C A 2: 76,568,565 (GRCm39) G25697W probably damaging Het
Ubb T G 11: 62,442,353 (GRCm39) probably null Het
Unc13b C T 4: 43,239,331 (GRCm39) R1038C probably damaging Het
Usp7 T C 16: 8,514,775 (GRCm39) M687V probably benign Het
Zfp160 G A 17: 21,240,996 (GRCm39) M21I probably benign Het
Zfp868 T C 8: 70,064,747 (GRCm39) N196S probably benign Het
Zup1 A T 10: 33,804,025 (GRCm39) I483N probably damaging Het
Other mutations in Cmtr2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00818:Cmtr2 APN 8 110,949,732 (GRCm39) missense probably benign 0.02
IGL01068:Cmtr2 APN 8 110,949,501 (GRCm39) missense possibly damaging 0.65
IGL01286:Cmtr2 APN 8 110,949,484 (GRCm39) missense possibly damaging 0.95
IGL01916:Cmtr2 APN 8 110,948,580 (GRCm39) missense probably benign 0.01
IGL02302:Cmtr2 APN 8 110,948,136 (GRCm39) missense probably damaging 1.00
IGL02426:Cmtr2 APN 8 110,948,322 (GRCm39) missense possibly damaging 0.65
IGL02903:Cmtr2 APN 8 110,949,510 (GRCm39) missense probably benign 0.02
PIT4362001:Cmtr2 UTSW 8 110,948,968 (GRCm39) missense probably damaging 0.99
R1435:Cmtr2 UTSW 8 110,947,711 (GRCm39) missense probably benign
R1501:Cmtr2 UTSW 8 110,948,235 (GRCm39) missense probably benign 0.29
R1512:Cmtr2 UTSW 8 110,949,267 (GRCm39) missense probably damaging 0.99
R1709:Cmtr2 UTSW 8 110,948,581 (GRCm39) missense probably benign 0.31
R1715:Cmtr2 UTSW 8 110,949,430 (GRCm39) missense probably damaging 1.00
R1953:Cmtr2 UTSW 8 110,948,551 (GRCm39) missense probably damaging 1.00
R1960:Cmtr2 UTSW 8 110,948,382 (GRCm39) missense probably damaging 1.00
R2422:Cmtr2 UTSW 8 110,949,413 (GRCm39) missense probably benign 0.02
R3717:Cmtr2 UTSW 8 110,948,386 (GRCm39) missense probably damaging 0.96
R4043:Cmtr2 UTSW 8 110,948,462 (GRCm39) nonsense probably null
R4074:Cmtr2 UTSW 8 110,947,849 (GRCm39) missense possibly damaging 0.83
R4179:Cmtr2 UTSW 8 110,947,669 (GRCm39) splice site probably null
R4457:Cmtr2 UTSW 8 110,948,884 (GRCm39) missense probably benign 0.02
R4945:Cmtr2 UTSW 8 110,948,065 (GRCm39) missense probably damaging 0.99
R5371:Cmtr2 UTSW 8 110,948,044 (GRCm39) missense probably damaging 1.00
R7231:Cmtr2 UTSW 8 110,949,178 (GRCm39) missense probably benign 0.02
R7527:Cmtr2 UTSW 8 110,948,770 (GRCm39) missense probably damaging 1.00
R7580:Cmtr2 UTSW 8 110,948,309 (GRCm39) missense probably damaging 0.99
R7808:Cmtr2 UTSW 8 110,948,251 (GRCm39) missense possibly damaging 0.88
R8510:Cmtr2 UTSW 8 110,949,067 (GRCm39) missense possibly damaging 0.53
R8690:Cmtr2 UTSW 8 110,948,977 (GRCm39) missense probably benign 0.00
R9172:Cmtr2 UTSW 8 110,948,761 (GRCm39) missense probably damaging 1.00
R9282:Cmtr2 UTSW 8 110,948,977 (GRCm39) missense probably benign
R9307:Cmtr2 UTSW 8 110,949,712 (GRCm39) missense probably benign 0.06
R9342:Cmtr2 UTSW 8 110,949,078 (GRCm39) missense possibly damaging 0.92
Z1177:Cmtr2 UTSW 8 110,948,131 (GRCm39) frame shift probably null
Predicted Primers PCR Primer
(F):5'- TTACCAAGTGCCTTCCGGAC -3'
(R):5'- AAAACTGCATCTGGAAGGTTCTG -3'

Sequencing Primer
(F):5'- AAGTGCCTTCCGGACGAACAG -3'
(R):5'- CTGCATCTGGAAGGTTCTGATAAC -3'
Posted On 2018-08-01