Incidental Mutation 'R6842:Or2ag12'
| ID |
533907 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2ag12
|
| Ensembl Gene |
ENSMUSG00000051680 |
| Gene Name |
olfactory receptor family 2 subfamily AG member 12 |
| Synonyms |
Olfr693, MOR283-8, GA_x6K02T2PBJ9-9055944-9054994 |
| MMRRC Submission |
044948-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.123)
|
| Stock # |
R6842 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
106276741-106277692 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 106277093 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Cysteine
at position 200
(Y200C)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150203
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000057817]
[ENSMUST00000215541]
|
| AlphaFold |
Q8VF89 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000057817
AA Change: Y200C
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000059679
Gene: ENSMUSG00000051680
AA Change: Y200C
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
5.2e-48 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
5.7e-24 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000215541
AA Change: Y200C
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.5%
- 20x: 98.2%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acsbg3 |
A |
G |
17: 57,184,432 (GRCm39) |
N69S |
probably benign |
Het |
| Adgrl3 |
C |
T |
5: 81,888,927 (GRCm39) |
A1042V |
probably damaging |
Het |
| Armh3 |
A |
G |
19: 45,807,416 (GRCm39) |
V660A |
probably benign |
Het |
| C1s2 |
T |
A |
6: 124,604,461 (GRCm39) |
H395L |
probably benign |
Het |
| Cacna1e |
A |
G |
1: 154,358,863 (GRCm39) |
I307T |
probably damaging |
Het |
| Cap2 |
T |
C |
13: 46,800,101 (GRCm39) |
S381P |
probably damaging |
Het |
| Cbfa2t2 |
A |
G |
2: 154,365,965 (GRCm39) |
T392A |
probably benign |
Het |
| Ccdc127 |
T |
C |
13: 74,505,088 (GRCm39) |
I212T |
probably damaging |
Het |
| Cela3a |
A |
G |
4: 137,132,979 (GRCm39) |
V91A |
probably benign |
Het |
| Cep85 |
C |
G |
4: 133,883,167 (GRCm39) |
A241P |
probably benign |
Het |
| Csmd2 |
T |
C |
4: 128,402,952 (GRCm39) |
F2347L |
possibly damaging |
Het |
| Ddx19a |
A |
G |
8: 111,705,257 (GRCm39) |
V288A |
possibly damaging |
Het |
| Fbxl5 |
T |
C |
5: 43,930,928 (GRCm39) |
E53G |
probably damaging |
Het |
| Fbxw26 |
A |
T |
9: 109,553,988 (GRCm39) |
I217N |
probably damaging |
Het |
| Fgfr1op2 |
T |
A |
6: 146,491,536 (GRCm39) |
|
probably null |
Het |
| Ighv1-37 |
A |
T |
12: 114,860,275 (GRCm39) |
I6N |
probably damaging |
Het |
| Klhdc10 |
T |
C |
6: 30,439,781 (GRCm39) |
L128P |
probably damaging |
Het |
| Lypla1 |
C |
T |
1: 4,902,563 (GRCm39) |
S24F |
probably benign |
Het |
| Mme |
T |
A |
3: 63,269,465 (GRCm39) |
D591E |
probably damaging |
Het |
| Mmp1b |
T |
A |
9: 7,384,888 (GRCm39) |
I254F |
probably damaging |
Het |
| Msr1 |
T |
C |
8: 40,085,866 (GRCm39) |
M5V |
probably benign |
Het |
| Myh8 |
A |
G |
11: 67,175,481 (GRCm39) |
D312G |
probably damaging |
Het |
| Nav2 |
T |
C |
7: 49,107,917 (GRCm39) |
Y709H |
possibly damaging |
Het |
| Oas1g |
T |
C |
5: 121,025,621 (GRCm39) |
E2G |
probably benign |
Het |
| Ocm |
T |
A |
5: 143,962,509 (GRCm39) |
I6F |
unknown |
Het |
| Odad2 |
C |
T |
18: 7,268,401 (GRCm39) |
D373N |
probably benign |
Het |
| Or13f5 |
T |
C |
4: 52,825,576 (GRCm39) |
Y60H |
probably damaging |
Het |
| Or8a1b |
T |
C |
9: 37,622,885 (GRCm39) |
N230S |
probably benign |
Het |
| Or8b12i |
A |
G |
9: 20,082,549 (GRCm39) |
L106P |
possibly damaging |
Het |
| Pax1 |
A |
G |
2: 147,215,640 (GRCm39) |
D419G |
probably benign |
Het |
| Plbd1 |
T |
A |
6: 136,612,612 (GRCm39) |
I194F |
probably benign |
Het |
| Prdx6 |
A |
T |
1: 161,074,940 (GRCm39) |
C47S |
probably damaging |
Het |
| Sec24d |
T |
C |
3: 123,136,868 (GRCm39) |
S534P |
probably benign |
Het |
| Sgk3 |
T |
C |
1: 9,968,979 (GRCm39) |
V452A |
probably benign |
Het |
| Sipa1l1 |
T |
C |
12: 82,467,320 (GRCm39) |
V1177A |
probably benign |
Het |
| Tgfbr1 |
T |
C |
4: 47,383,757 (GRCm39) |
C32R |
probably damaging |
Het |
| Trim66 |
T |
C |
7: 109,059,983 (GRCm39) |
N801S |
probably benign |
Het |
| Utp6 |
C |
T |
11: 79,831,775 (GRCm39) |
S504N |
probably benign |
Het |
| Wdsub1 |
A |
C |
2: 59,708,532 (GRCm39) |
S114A |
probably benign |
Het |
| Wfikkn2 |
T |
C |
11: 94,128,866 (GRCm39) |
E425G |
probably damaging |
Het |
| Zfp956 |
C |
T |
6: 47,940,763 (GRCm39) |
T374I |
possibly damaging |
Het |
|
| Other mutations in Or2ag12 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00911:Or2ag12
|
APN |
7 |
106,277,040 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01135:Or2ag12
|
APN |
7 |
106,277,400 (GRCm39) |
missense |
probably benign |
0.41 |
|
IGL03247:Or2ag12
|
APN |
7 |
106,276,754 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0206:Or2ag12
|
UTSW |
7 |
106,276,781 (GRCm39) |
missense |
probably benign |
0.03 |
|
R1125:Or2ag12
|
UTSW |
7 |
106,277,214 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R1873:Or2ag12
|
UTSW |
7 |
106,277,691 (GRCm39) |
start codon destroyed |
probably damaging |
1.00 |
|
R1969:Or2ag12
|
UTSW |
7 |
106,276,877 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1970:Or2ag12
|
UTSW |
7 |
106,276,877 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1971:Or2ag12
|
UTSW |
7 |
106,276,877 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1972:Or2ag12
|
UTSW |
7 |
106,277,426 (GRCm39) |
missense |
probably benign |
0.01 |
|
R1973:Or2ag12
|
UTSW |
7 |
106,277,426 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2570:Or2ag12
|
UTSW |
7 |
106,276,874 (GRCm39) |
missense |
probably benign |
0.41 |
|
R3975:Or2ag12
|
UTSW |
7 |
106,276,992 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4840:Or2ag12
|
UTSW |
7 |
106,277,330 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5569:Or2ag12
|
UTSW |
7 |
106,277,690 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
|
R6759:Or2ag12
|
UTSW |
7 |
106,277,100 (GRCm39) |
missense |
probably benign |
|
|
R7108:Or2ag12
|
UTSW |
7 |
106,277,255 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7565:Or2ag12
|
UTSW |
7 |
106,277,333 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7800:Or2ag12
|
UTSW |
7 |
106,276,781 (GRCm39) |
missense |
probably benign |
0.03 |
|
R9225:Or2ag12
|
UTSW |
7 |
106,276,976 (GRCm39) |
missense |
probably benign |
0.01 |
|
X0025:Or2ag12
|
UTSW |
7 |
106,277,456 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1088:Or2ag12
|
UTSW |
7 |
106,277,664 (GRCm39) |
missense |
probably benign |
0.02 |
|
| Predicted Primers |
PCR Primer
(F):5'- GACTGTGAGAGGCCCATAGTAC -3'
(R):5'- TGGCCATTTGTCATCCATTGAAC -3'
Sequencing Primer
(F):5'- GTGAGAGGCCCATAGTACATCCC -3'
(R):5'- TTCATGAGGCCAAGCATCTG -3'
|
| Posted On |
2018-09-12 |
Incidental Mutation