Incidental Mutation 'IGL01018:Vmn2r125'
ID |
53544 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vmn2r125
|
Ensembl Gene |
ENSMUSG00000096042 |
Gene Name |
vomeronasal 2, receptor 125 |
Synonyms |
Gm20782 |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.078)
|
Stock # |
IGL01018
|
Quality Score |
|
Status
|
|
Chromosome |
4 |
Chromosomal Location |
156696567-156708037 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 156703140 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Asparagine to Aspartic acid
at position 173
(N173D)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000094556
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000096794]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000096794
AA Change: N173D
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000094556 Gene: ENSMUSG00000096042 AA Change: N173D
Domain | Start | End | E-Value | Type |
Pfam:ANF_receptor
|
9 |
355 |
7e-32 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 45 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
5530400C23Rik |
G |
T |
6: 133,271,460 (GRCm39) |
R168I |
probably benign |
Het |
5530400C23Rik |
A |
T |
6: 133,271,461 (GRCm39) |
R168S |
probably benign |
Het |
Armt1 |
T |
A |
10: 4,400,732 (GRCm39) |
S160T |
probably benign |
Het |
Armt1 |
C |
T |
10: 4,404,237 (GRCm39) |
|
probably benign |
Het |
Ccdc170 |
T |
C |
10: 4,462,788 (GRCm39) |
W35R |
probably benign |
Het |
Ccdc170 |
T |
C |
10: 4,464,114 (GRCm39) |
V31A |
probably benign |
Het |
Ccdc170 |
G |
T |
10: 4,464,155 (GRCm39) |
A99S |
probably benign |
Het |
Glp2r |
C |
A |
11: 67,600,470 (GRCm39) |
V460F |
probably benign |
Het |
Gm21411 |
C |
T |
4: 146,977,067 (GRCm39) |
S69N |
possibly damaging |
Het |
Gm21411 |
T |
C |
4: 146,977,034 (GRCm39) |
Q80R |
probably benign |
Het |
Gm21738 |
G |
A |
14: 19,418,856 (GRCm38) |
P24L |
probably benign |
Het |
H2-M10.6 |
C |
T |
17: 37,123,112 (GRCm39) |
A15V |
probably benign |
Het |
H60c |
T |
C |
10: 3,209,766 (GRCm39) |
M174V |
probably benign |
Het |
H60c |
A |
C |
10: 3,210,343 (GRCm39) |
F69V |
probably benign |
Het |
Ipcef1 |
C |
T |
10: 6,869,968 (GRCm39) |
R144Q |
probably damaging |
Het |
Ipcef1 |
G |
A |
10: 6,840,551 (GRCm39) |
A382V |
probably benign |
Het |
Mapk8ip3 |
T |
G |
17: 25,118,693 (GRCm39) |
|
probably benign |
Het |
Mthfd1l |
T |
C |
10: 3,928,708 (GRCm39) |
V100A |
probably benign |
Het |
Mthfd1l |
T |
C |
10: 3,957,800 (GRCm39) |
V279A |
probably benign |
Het |
Mthfd1l |
T |
C |
10: 3,982,345 (GRCm39) |
|
probably benign |
Het |
Mtrf1l |
A |
G |
10: 5,764,180 (GRCm39) |
|
probably benign |
Het |
Myo18b |
T |
C |
5: 112,957,613 (GRCm39) |
E1450G |
probably damaging |
Het |
Obscn |
C |
T |
11: 59,018,895 (GRCm39) |
V973M |
probably damaging |
Het |
Oprm1 |
T |
C |
10: 6,987,170 (GRCm39) |
|
probably benign |
Het |
Or6p1 |
G |
A |
1: 174,258,908 (GRCm39) |
V305I |
probably benign |
Het |
Pou5f2 |
A |
G |
13: 78,174,057 (GRCm39) |
|
probably benign |
Het |
Ralgapa2 |
G |
A |
2: 146,252,113 (GRCm39) |
H891Y |
probably benign |
Het |
Ralgapa2 |
T |
G |
2: 146,252,112 (GRCm39) |
H806P |
probably benign |
Het |
Rmnd1 |
A |
G |
10: 4,377,392 (GRCm39) |
W96R |
probably benign |
Het |
Rmnd1 |
A |
T |
10: 4,377,290 (GRCm39) |
S130T |
probably benign |
Het |
Spata31e2 |
T |
C |
1: 26,721,991 (GRCm39) |
E1063G |
probably damaging |
Het |
Speer4a3 |
G |
T |
5: 26,155,721 (GRCm39) |
H208N |
probably benign |
Het |
Trappc12 |
A |
C |
12: 28,741,853 (GRCm39) |
|
probably benign |
Het |
Ulbp3 |
G |
A |
10: 3,075,031 (GRCm39) |
|
noncoding transcript |
Het |
Ulbp3 |
C |
T |
10: 3,075,193 (GRCm39) |
|
noncoding transcript |
Het |
Ulbp3 |
A |
G |
10: 3,070,231 (GRCm39) |
|
noncoding transcript |
Het |
Ulbp3 |
A |
G |
10: 3,070,209 (GRCm39) |
|
noncoding transcript |
Het |
Vip |
A |
G |
10: 5,592,480 (GRCm39) |
D40G |
probably benign |
Het |
Vmn2r129 |
T |
C |
4: 156,687,885 (GRCm39) |
|
noncoding transcript |
Het |
Vmn2r129 |
G |
A |
4: 156,686,900 (GRCm39) |
|
noncoding transcript |
Het |
Vmn2r129 |
A |
T |
4: 156,690,441 (GRCm39) |
|
noncoding transcript |
Het |
Vmn2r129 |
C |
A |
4: 156,690,730 (GRCm39) |
|
noncoding transcript |
Het |
Vmn2r129 |
T |
C |
4: 156,686,558 (GRCm39) |
|
noncoding transcript |
Het |
Vmn2r40 |
G |
A |
7: 8,911,175 (GRCm39) |
S706F |
probably damaging |
Het |
Zfp14 |
T |
A |
7: 29,737,526 (GRCm39) |
R486S |
probably damaging |
Het |
|
Other mutations in Vmn2r125 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00990:Vmn2r125
|
APN |
4 |
156,703,194 (GRCm39) |
missense |
probably benign |
|
IGL00990:Vmn2r125
|
APN |
4 |
156,703,333 (GRCm39) |
missense |
probably benign |
0.06 |
IGL00990:Vmn2r125
|
APN |
4 |
156,703,332 (GRCm39) |
missense |
probably benign |
0.16 |
IGL00990:Vmn2r125
|
APN |
4 |
156,703,521 (GRCm39) |
missense |
probably benign |
|
IGL00990:Vmn2r125
|
APN |
4 |
156,703,678 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00990:Vmn2r125
|
APN |
4 |
156,703,261 (GRCm39) |
missense |
probably benign |
0.01 |
IGL00990:Vmn2r125
|
APN |
4 |
156,703,195 (GRCm39) |
missense |
probably benign |
0.35 |
IGL01018:Vmn2r125
|
APN |
4 |
156,703,332 (GRCm39) |
missense |
probably benign |
0.16 |
IGL01018:Vmn2r125
|
APN |
4 |
156,703,195 (GRCm39) |
missense |
probably benign |
0.35 |
IGL01018:Vmn2r125
|
APN |
4 |
156,703,333 (GRCm39) |
missense |
probably benign |
0.06 |
IGL01018:Vmn2r125
|
APN |
4 |
156,703,194 (GRCm39) |
missense |
probably benign |
|
IGL01018:Vmn2r125
|
APN |
4 |
156,702,907 (GRCm39) |
splice site |
probably benign |
|
IGL01018:Vmn2r125
|
APN |
4 |
156,703,521 (GRCm39) |
missense |
probably benign |
|
IGL02644:Vmn2r125
|
APN |
4 |
156,703,294 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03144:Vmn2r125
|
APN |
4 |
156,702,314 (GRCm39) |
missense |
possibly damaging |
0.76 |
BB013:Vmn2r125
|
UTSW |
4 |
156,702,988 (GRCm39) |
missense |
probably damaging |
1.00 |
FR4342:Vmn2r125
|
UTSW |
4 |
156,703,260 (GRCm39) |
missense |
probably benign |
0.01 |
R0408:Vmn2r125
|
UTSW |
4 |
156,703,153 (GRCm39) |
missense |
probably damaging |
0.99 |
R0785:Vmn2r125
|
UTSW |
4 |
156,703,396 (GRCm39) |
missense |
probably benign |
|
R1185:Vmn2r125
|
UTSW |
4 |
156,703,396 (GRCm39) |
missense |
probably benign |
|
R1185:Vmn2r125
|
UTSW |
4 |
156,703,396 (GRCm39) |
missense |
probably benign |
|
R1530:Vmn2r125
|
UTSW |
4 |
156,703,447 (GRCm39) |
missense |
probably damaging |
1.00 |
R1698:Vmn2r125
|
UTSW |
4 |
156,703,333 (GRCm39) |
missense |
probably benign |
0.06 |
R1780:Vmn2r125
|
UTSW |
4 |
156,703,668 (GRCm39) |
missense |
probably damaging |
1.00 |
R1977:Vmn2r125
|
UTSW |
4 |
156,707,162 (GRCm39) |
splice site |
probably null |
|
R2917:Vmn2r125
|
UTSW |
4 |
156,703,564 (GRCm39) |
missense |
probably benign |
0.01 |
R3428:Vmn2r125
|
UTSW |
4 |
156,702,436 (GRCm39) |
missense |
probably benign |
0.34 |
R3712:Vmn2r125
|
UTSW |
4 |
156,702,419 (GRCm39) |
nonsense |
probably null |
|
R4274:Vmn2r125
|
UTSW |
4 |
156,702,382 (GRCm39) |
missense |
probably benign |
0.00 |
R4575:Vmn2r125
|
UTSW |
4 |
156,702,272 (GRCm39) |
missense |
probably null |
0.30 |
R4707:Vmn2r125
|
UTSW |
4 |
156,702,276 (GRCm39) |
missense |
probably damaging |
1.00 |
R5229:Vmn2r125
|
UTSW |
4 |
156,703,333 (GRCm39) |
missense |
probably benign |
0.06 |
R5504:Vmn2r125
|
UTSW |
4 |
156,703,456 (GRCm39) |
missense |
possibly damaging |
0.81 |
R5587:Vmn2r125
|
UTSW |
4 |
156,702,433 (GRCm39) |
missense |
probably damaging |
1.00 |
R5987:Vmn2r125
|
UTSW |
4 |
156,702,292 (GRCm39) |
missense |
probably damaging |
1.00 |
R6037:Vmn2r125
|
UTSW |
4 |
156,703,396 (GRCm39) |
missense |
probably benign |
|
R6183:Vmn2r125
|
UTSW |
4 |
156,702,364 (GRCm39) |
missense |
probably damaging |
0.97 |
R6456:Vmn2r125
|
UTSW |
4 |
156,703,357 (GRCm39) |
missense |
probably benign |
0.41 |
R7342:Vmn2r125
|
UTSW |
4 |
156,703,138 (GRCm39) |
missense |
probably damaging |
1.00 |
R7926:Vmn2r125
|
UTSW |
4 |
156,702,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Vmn2r125
|
UTSW |
4 |
156,703,642 (GRCm39) |
missense |
probably damaging |
1.00 |
R8191:Vmn2r125
|
UTSW |
4 |
156,703,709 (GRCm39) |
missense |
probably damaging |
1.00 |
R8272:Vmn2r125
|
UTSW |
4 |
156,702,373 (GRCm39) |
missense |
probably damaging |
1.00 |
R8962:Vmn2r125
|
UTSW |
4 |
156,703,186 (GRCm39) |
missense |
possibly damaging |
0.50 |
R9187:Vmn2r125
|
UTSW |
4 |
156,703,554 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Posted On |
2013-06-28 |