Mutagenetix > Incidental Mutation

Incidental Mutation 'R6862:Parp12'

535687

Institutional Source

Beutler Lab

Gene Symbol

Parp12

Ensembl Gene

ENSMUSG00000038507

Gene Name

poly (ADP-ribose) polymerase family, member 12

Synonyms

Zc3hdc1

MMRRC Submission

045026-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.157) question?

Stock #

R6862 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

39063346-39095283 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 39088670 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Valine at position 189 (I189V)

Ref Sequence

ENSEMBL: ENSMUSP00000039704 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000038398]

AlphaFold

Q8BZ20

Predicted Effect

probably benign
Transcript: ENSMUST00000038398
AA Change: I189V

PolyPhen 2 Score 0.018 (Sensitivity: 0.95; Specificity: 0.80)

SMART Domains

Protein: ENSMUSP00000039704
Gene: ENSMUSG00000038507
AA Change: I189V

Domain	Start	End	E-Value	Type
low complexity region	2	11	N/A	INTRINSIC
low complexity region	17	32	N/A	INTRINSIC
low complexity region	51	83	N/A	INTRINSIC
ZnF_C3H1	99	127	2.79e1	SMART
ZnF_C3H1	186	210	1.36e-2	SMART
ZnF_C3H1	280	306	2.03e1	SMART
Pfam:WWE	385	468	1.3e-16	PFAM
Pfam:PARP	506	689	5.2e-48	PFAM

Meta Mutation Damage Score

0.1754

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 98.0%

Validation Efficiency

98% (57/58)

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930579F01Rik	C	T	3: 137,891,949 (GRCm39)		probably benign	Het
Adgra2	T	A	8: 27,603,465 (GRCm39)	C417S	probably damaging	Het
Adgra2	C	A	8: 27,603,464 (GRCm39)	H416Q	probably benign	Het
Aff3	C	A	1: 38,445,578 (GRCm39)	R307L	possibly damaging	Het
Arhgap17	T	C	7: 122,921,124 (GRCm39)	D121G	probably damaging	Het
Ascc3	G	T	10: 50,725,742 (GRCm39)	R2155I	probably null	Het
Ccdc115	C	T	1: 34,478,364 (GRCm39)	S19N	possibly damaging	Het
Ccser2	T	C	14: 36,662,038 (GRCm39)	N382S	probably benign	Het
Cct6b	A	T	11: 82,610,785 (GRCm39)	V500E	probably damaging	Het
Cenpo	A	T	12: 4,266,539 (GRCm39)	Y190N	probably damaging	Het
Cfh	T	A	1: 140,030,100 (GRCm39)	K924N	probably damaging	Het
Col4a1	A	G	8: 11,252,926 (GRCm39)		probably benign	Het
Coro1b	T	C	19: 4,200,770 (GRCm39)	V234A	probably benign	Het
Crot	T	C	5: 9,039,641 (GRCm39)	K69E	probably damaging	Het
Cyp2d11	A	T	15: 82,274,339 (GRCm39)	H347Q	probably benign	Het
Efcab3	A	T	11: 104,612,284 (GRCm39)	K636*	probably null	Het
Fbn2	T	A	18: 58,257,393 (GRCm39)	I325F	probably benign	Het
Fbxw4	T	A	19: 45,571,187 (GRCm39)	R41S	probably benign	Het
Fn1	T	A	1: 71,653,066 (GRCm39)	I1308F	probably benign	Het
Frem1	C	A	4: 82,930,251 (GRCm39)	E232*	probably null	Het
Gabrg3	T	C	7: 56,423,059 (GRCm39)	Q213R	possibly damaging	Het
Garin3	G	A	11: 46,298,418 (GRCm39)	G574D	possibly damaging	Het
Gsdme	A	T	6: 50,204,378 (GRCm39)	V193E	probably damaging	Het
Hadha	C	A	5: 30,352,977 (GRCm39)		probably null	Het
Hdgfl2	C	A	17: 56,406,211 (GRCm39)	A533E	probably damaging	Het
Hivep2	T	C	10: 14,006,327 (GRCm39)	F975S	probably damaging	Het
Htatip2	T	A	7: 49,420,666 (GRCm39)	S171T	probably benign	Het
Ift57	A	T	16: 49,584,167 (GRCm39)	I307F	possibly damaging	Het
Il22	A	T	10: 118,041,715 (GRCm39)	R110W	probably benign	Het
Kcnk13	G	T	12: 100,027,948 (GRCm39)	R341L	probably damaging	Het
Kif2b	G	A	11: 91,466,741 (GRCm39)	T514M	probably damaging	Het
Kmt2c	A	C	5: 25,515,515 (GRCm39)	I2776S	probably damaging	Het
Ly9	T	C	1: 171,428,723 (GRCm39)	D189G	probably benign	Het
Mal2	T	C	15: 54,451,753 (GRCm39)	V58A	probably damaging	Het
Mettl21e	T	A	1: 44,245,526 (GRCm39)	N240I	probably benign	Het
Msantd5f1	A	G	4: 73,605,621 (GRCm39)	N344S	probably benign	Het
Muc5ac	C	T	7: 141,363,481 (GRCm39)		probably benign	Het
Nacc1	G	A	8: 85,399,844 (GRCm39)	R458C	probably damaging	Het
Ncapd3	T	C	9: 26,942,105 (GRCm39)	C14R	probably damaging	Het
Obscn	G	T	11: 58,886,279 (GRCm39)		probably benign	Het
Or13c3	A	G	4: 52,855,695 (GRCm39)	F273L	probably benign	Het
Or1j4	A	T	2: 36,740,234 (GRCm39)	M59L	possibly damaging	Het
Or8d23	T	A	9: 38,841,772 (GRCm39)	F102I	possibly damaging	Het
Pde4dip	C	A	3: 97,674,340 (GRCm39)	R192L	possibly damaging	Het
Pdlim4	C	A	11: 53,946,674 (GRCm39)	E204D	probably damaging	Het
Phf3	T	C	1: 30,853,063 (GRCm39)	Q1049R	probably damaging	Het
Prr14l	A	G	5: 32,985,103 (GRCm39)	L1464P	probably damaging	Het
Psg25	C	T	7: 18,255,323 (GRCm39)	V398I	probably benign	Het
Ptprq	T	A	10: 107,522,086 (GRCm39)	N622Y	probably damaging	Het
Rsf1	CG	CGACGGCGGTG	7: 97,229,115 (GRCm39)		probably benign	Het
Tex36	A	G	7: 133,189,002 (GRCm39)	L190P	probably benign	Het
Tk1	A	G	11: 117,707,320 (GRCm39)	C156R	probably damaging	Het
Tmem144	T	A	3: 79,739,406 (GRCm39)	M126L	probably benign	Het
Tmem208	G	A	8: 106,054,862 (GRCm39)		probably null	Het
Trappc13	T	C	13: 104,286,660 (GRCm39)	Q199R	probably damaging	Het
Trim30b	T	A	7: 104,012,960 (GRCm39)	K156N	probably damaging	Het
Trps1	A	G	15: 50,695,001 (GRCm39)		probably null	Het
Washc4	T	A	10: 83,394,757 (GRCm39)	F329Y	possibly damaging	Het
Zbed5	T	G	5: 129,932,026 (GRCm39)	D658E	probably benign	Het
Zfyve28	T	G	5: 34,445,449 (GRCm39)	K11N	probably benign	Het
Zp1	C	T	19: 10,893,877 (GRCm39)	V443I	possibly damaging	Het

Other mutations in Parp12

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02199:Parp12	APN	6	39,073,524 (GRCm39)	missense	probably benign	0.01
IGL02937:Parp12	APN	6	39,079,515 (GRCm39)	missense	probably damaging	1.00
IGL03032:Parp12	APN	6	39,064,520 (GRCm39)	splice site	probably null
IGL03149:Parp12	APN	6	39,091,165 (GRCm39)	missense	probably benign	0.07
IGL03365:Parp12	APN	6	39,079,581 (GRCm39)	missense	probably damaging	1.00
I1329:Parp12	UTSW	6	39,064,505 (GRCm39)	missense	probably damaging	1.00
R1016:Parp12	UTSW	6	39,088,660 (GRCm39)	missense	probably damaging	1.00
R1446:Parp12	UTSW	6	39,079,495 (GRCm39)	missense	probably benign	0.00
R1640:Parp12	UTSW	6	39,088,612 (GRCm39)	missense	probably damaging	1.00
R1640:Parp12	UTSW	6	39,073,574 (GRCm39)	missense	probably benign	0.38
R4794:Parp12	UTSW	6	39,094,744 (GRCm39)	missense	probably benign	0.02
R5324:Parp12	UTSW	6	39,079,546 (GRCm39)	missense	probably damaging	0.99
R5411:Parp12	UTSW	6	39,067,142 (GRCm39)	missense	probably damaging	1.00
R6864:Parp12	UTSW	6	39,088,670 (GRCm39)	missense	probably benign	0.02
R6865:Parp12	UTSW	6	39,088,670 (GRCm39)	missense	probably benign	0.02
R7124:Parp12	UTSW	6	39,088,670 (GRCm39)	missense	probably benign	0.02
R7126:Parp12	UTSW	6	39,088,670 (GRCm39)	missense	probably benign	0.02
R7935:Parp12	UTSW	6	39,079,612 (GRCm39)	missense	possibly damaging	0.70
R8050:Parp12	UTSW	6	39,066,038 (GRCm39)	missense	probably damaging	1.00
R8403:Parp12	UTSW	6	39,068,279 (GRCm39)	missense	probably benign	0.06
R8686:Parp12	UTSW	6	39,094,856 (GRCm39)	missense	probably benign	0.00
R8792:Parp12	UTSW	6	39,065,984 (GRCm39)	missense	probably benign	0.00
R8813:Parp12	UTSW	6	39,073,508 (GRCm39)	missense	probably damaging	1.00
R9797:Parp12	UTSW	6	39,067,185 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- ACACTTTGCTGAGGGCTGAG -3'
(R):5'- GCCCTAAGAACCTCTCTGAC -3'

Sequencing Primer
(F):5'- GAGCCCTTATTCTTGATGTCATATG -3'
(R):5'- CCTCTCTGACTTTGAATTTTGAAAGG -3'

Posted On

2018-10-18