Mutagenetix > Incidental Mutation

Incidental Mutation 'R6870:Or8b1'

536146

Institutional Source

Beutler Lab

Gene Symbol

Or8b1

Ensembl Gene

ENSMUSG00000039962

Gene Name

olfactory receptor family 8 subfamily B member 1

Synonyms

Olfr906, GA_x6K02T2PVTD-32194085-32195020, MOR167-2

MMRRC Submission

044967-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.056) question?

Stock #

R6870 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

38399327-38400262 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 38399382 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Alanine at position 19 (D19A)

Ref Sequence

ENSEMBL: ENSMUSP00000151008 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000045493] [ENSMUST00000214344]

AlphaFold

K7N5P3

Predicted Effect

probably benign
Transcript: ENSMUST00000045493
AA Change: D19A

PolyPhen 2 Score 0.188 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000039040
Gene: ENSMUSG00000039962
AA Change: D19A

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	307	3.6e-50	PFAM
Pfam:7tm_1	41	290	2.1e-21	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000214344
AA Change: D19A

PolyPhen 2 Score 0.188 (Sensitivity: 0.92; Specificity: 0.87)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.2%
20x: 97.4%

Validation Efficiency

72% (39/54)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700088E04Rik	T	C	15: 79,020,608 (GRCm39)	Y62C	probably benign	Het
A1bg	T	C	15: 60,791,564 (GRCm39)	T291A	probably damaging	Het
Abcb11	A	G	2: 69,115,642 (GRCm39)	I574T	possibly damaging	Het
Abcb5	T	A	12: 118,929,000 (GRCm39)	Y17F	possibly damaging	Het
Arfgef3	A	T	10: 18,522,478 (GRCm39)	L516*	probably null	Het
Arhgap21	A	G	2: 20,885,321 (GRCm39)	S619P	probably damaging	Het
Atp2c1	A	G	9: 105,347,261 (GRCm39)	V65A	probably benign	Het
Calm3	T	A	7: 16,653,568 (GRCm39)	Q9L	probably benign	Het
Cd300c2	C	T	11: 114,891,503 (GRCm39)	D124N	probably damaging	Het
Celsr3	A	G	9: 108,706,390 (GRCm39)	T958A	probably benign	Het
Cemip2	T	C	19: 21,809,487 (GRCm39)	S956P	possibly damaging	Het
Cfap69	T	C	5: 5,671,958 (GRCm39)	T317A	probably benign	Het
Cluh	T	A	11: 74,556,210 (GRCm39)	I887K	probably damaging	Het
Dag1	A	T	9: 108,086,457 (GRCm39)	V228E	probably damaging	Het
Dhtkd1	T	C	2: 5,924,248 (GRCm39)		probably null	Het
Dnah1	T	A	14: 30,993,018 (GRCm39)	K2959*	probably null	Het
Dnttip2	T	A	3: 122,069,457 (GRCm39)	V224E	probably damaging	Het
Drosha	C	T	15: 12,907,479 (GRCm39)	P1071L	probably benign	Het
E030025P04Rik	T	A	11: 109,030,993 (GRCm39)	H84L	unknown	Het
Elac2	A	T	11: 64,890,589 (GRCm39)	S698C	probably null	Het
Elf2	A	T	3: 51,201,586 (GRCm39)	*88R	probably null	Het
Fastkd1	T	A	2: 69,538,958 (GRCm39)	I143L	probably benign	Het
Fbxw10	C	T	11: 62,746,193 (GRCm39)	R366C	probably damaging	Het
Frg2f1	T	C	4: 119,388,329 (GRCm39)	M57V	probably benign	Het
Gbp4	T	C	5: 105,273,444 (GRCm39)	S129G	probably damaging	Het
Gnat2	A	C	3: 108,002,947 (GRCm39)		probably benign	Het
Golgb1	C	A	16: 36,738,565 (GRCm39)	F2301L	probably damaging	Het
Il18bp	T	C	7: 101,666,518 (GRCm39)	T2A	possibly damaging	Het
Kpna2	T	C	11: 106,883,520 (GRCm39)		probably null	Het
Lrrfip2	A	T	9: 111,045,187 (GRCm39)		probably benign	Het
Map4k1	T	G	7: 28,701,096 (GRCm39)		probably null	Het
Mcm3ap	T	C	10: 76,306,049 (GRCm39)	V54A	probably benign	Het
Nup133	A	G	8: 124,626,246 (GRCm39)	I1112T	probably benign	Het
Pcdhac1	T	A	18: 37,225,140 (GRCm39)	V651D	probably damaging	Het
Pde10a	A	G	17: 9,186,356 (GRCm39)	T571A	possibly damaging	Het
Phc3	A	G	3: 30,990,910 (GRCm39)	S403P	probably damaging	Het
Prl7b1	T	C	13: 27,788,516 (GRCm39)	E113G	probably damaging	Het
Psmd2	T	G	16: 20,480,593 (GRCm39)	M744R	probably benign	Het
Qrich2	T	C	11: 116,346,156 (GRCm39)	D1556G	probably damaging	Het
Septin1	C	T	7: 126,816,876 (GRCm39)	V46M	probably benign	Het
Shank2	C	A	7: 143,606,197 (GRCm39)	Q127K	probably damaging	Het
Siah1a	A	G	8: 87,451,653 (GRCm39)	V277A	possibly damaging	Het
Slc4a7	T	A	14: 14,733,846 (GRCm38)	D85E	probably damaging	Het
Slc5a12	A	T	2: 110,472,155 (GRCm39)	I526F	probably damaging	Het
Svil	T	C	18: 5,063,231 (GRCm39)	V834A	possibly damaging	Het
Sycp1	T	A	3: 102,842,919 (GRCm39)	S17C	probably damaging	Het
Tssk6	G	A	8: 70,355,673 (GRCm39)	R239Q	probably benign	Het
Txnrd1	A	G	10: 82,709,042 (GRCm39)	D80G	probably benign	Het
Tyk2	A	G	9: 21,036,250 (GRCm39)	F79S	probably damaging	Het
Tyrp1	T	C	4: 80,769,014 (GRCm39)	S503P	probably benign	Het
Upf1	A	T	8: 70,794,211 (GRCm39)	C232S	probably benign	Het
Zeb2	G	A	2: 44,878,922 (GRCm39)	T1080I	probably damaging	Het

Other mutations in Or8b1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL03127:Or8b1	APN	9	38,399,882 (GRCm39)	missense	probably benign	0.13
R0948:Or8b1	UTSW	9	38,400,244 (GRCm39)	missense	probably benign	0.00
R1236:Or8b1	UTSW	9	38,399,525 (GRCm39)	missense	probably damaging	1.00
R1246:Or8b1	UTSW	9	38,400,086 (GRCm39)	missense	probably damaging	1.00
R1442:Or8b1	UTSW	9	38,399,939 (GRCm39)	missense	probably benign	0.10
R2016:Or8b1	UTSW	9	38,399,309 (GRCm39)	critical splice acceptor site	probably null
R2264:Or8b1	UTSW	9	38,399,351 (GRCm39)	missense	possibly damaging	0.50
R2268:Or8b1	UTSW	9	38,399,504 (GRCm39)	missense	probably damaging	1.00
R3853:Or8b1	UTSW	9	38,400,247 (GRCm39)	missense	probably benign	0.18
R4066:Or8b1	UTSW	9	38,399,778 (GRCm39)	missense	probably benign	0.17
R4594:Or8b1	UTSW	9	38,400,057 (GRCm39)	missense	probably damaging	0.98
R5192:Or8b1	UTSW	9	38,400,101 (GRCm39)	missense	possibly damaging	0.69
R5436:Or8b1	UTSW	9	38,399,835 (GRCm39)	missense	probably benign	0.31
R5598:Or8b1	UTSW	9	38,399,821 (GRCm39)	missense	possibly damaging	0.77
R5694:Or8b1	UTSW	9	38,399,532 (GRCm39)	missense	probably damaging	1.00
R5914:Or8b1	UTSW	9	38,399,657 (GRCm39)	missense	probably damaging	1.00
R5959:Or8b1	UTSW	9	38,400,207 (GRCm39)	missense	probably damaging	1.00
R6318:Or8b1	UTSW	9	38,399,673 (GRCm39)	missense	probably benign
R7482:Or8b1	UTSW	9	38,399,747 (GRCm39)	missense	probably damaging	0.99
R7571:Or8b1	UTSW	9	38,399,952 (GRCm39)	missense	probably benign	0.08
R7917:Or8b1	UTSW	9	38,399,905 (GRCm39)	nonsense	probably null
R8837:Or8b1	UTSW	9	38,399,597 (GRCm39)	missense	probably benign	0.05
R9562:Or8b1	UTSW	9	38,400,092 (GRCm39)	missense	possibly damaging	0.45
R9628:Or8b1	UTSW	9	38,399,871 (GRCm39)	missense	probably benign	0.17

Predicted Primers

PCR Primer
(F):5'- CACTCATGGTCATGATAATGGC -3'
(R):5'- CATTTTGGGTGTAAACACTGAAGAG -3'

Sequencing Primer
(F):5'- CTCATGGTCATGATAATGGCAAATTC -3'
(R):5'- CACTGAAGAGTAACAGAGGTCTATC -3'

Posted On

2018-10-18