Mutagenetix > Incidental Mutation

Incidental Mutation 'R6815:Armh1'

537267

Institutional Source

Beutler Lab

Gene Symbol

Armh1

Ensembl Gene

ENSMUSG00000060268

Gene Name

armadillo-like helical domain containing 1

Synonyms

LOC381544, LOC381543, Ncrna00082, Gm1661

MMRRC Submission

044927-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.094) question?

Stock #

R6815 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

117070531-117109322 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 117087134 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 177 (H177L)

Ref Sequence

ENSEMBL: ENSMUSP00000128613 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000077500] [ENSMUST00000165128]

AlphaFold

E9Q963

Predicted Effect

probably damaging
Transcript: ENSMUST00000077500
AA Change: H177L

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000076706
Gene: ENSMUSG00000060268
AA Change: H177L

Domain	Start	End	E-Value	Type
SCOP:d1qbkb_	156	272	3e-3	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000165128
AA Change: H177L

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000128613
Gene: ENSMUSG00000060268
AA Change: H177L

Domain	Start	End	E-Value	Type
low complexity region	162	176	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931414P19Rik	T	G	14: 54,828,610 (GRCm39)	N297T	probably damaging	Het
6820408C15Rik	A	G	2: 152,282,975 (GRCm39)	N251S	probably benign	Het
Abcc5	T	C	16: 20,152,380 (GRCm39)	T1389A	probably damaging	Het
Acad11	A	G	9: 103,958,526 (GRCm39)	T265A	probably benign	Het
Ace3	C	T	11: 105,888,084 (GRCm39)	Q302*	probably null	Het
Aip	A	T	19: 4,166,066 (GRCm39)	H128Q	probably benign	Het
Akr1b7	A	T	6: 34,389,269 (GRCm39)		probably null	Het
Arid4a	T	A	12: 71,063,856 (GRCm39)		probably null	Het
Aspm	A	G	1: 139,407,880 (GRCm39)	T2256A	probably benign	Het
Bco1	A	T	8: 117,840,261 (GRCm39)	M260L	probably benign	Het
Ccdc110	A	G	8: 46,395,024 (GRCm39)	N305S	probably benign	Het
Ccdc158	T	A	5: 92,760,345 (GRCm39)	Y1035F	probably damaging	Het
Cd180	C	T	13: 102,841,937 (GRCm39)	L328F	probably damaging	Het
Cntrl	T	C	2: 35,039,503 (GRCm39)	L1121P	probably damaging	Het
Cyp2u1	A	C	3: 131,091,659 (GRCm39)	I287S	probably damaging	Het
Dnah3	C	T	7: 119,570,950 (GRCm39)	M2195I	probably benign	Het
Dnajc21	C	T	15: 10,447,777 (GRCm39)		probably null	Het
Dock10	C	T	1: 80,516,576 (GRCm39)	V1398M	possibly damaging	Het
Dpy19l3	T	A	7: 35,449,272 (GRCm39)	I44F	possibly damaging	Het
Dst	C	A	1: 34,267,450 (GRCm39)	T4964K	possibly damaging	Het
Ercc4	T	C	16: 12,941,299 (GRCm39)	I139T	probably damaging	Het
Gpr4	T	A	7: 18,956,560 (GRCm39)	F161I	probably damaging	Het
Gucy2e	A	C	11: 69,122,827 (GRCm39)	L516R	possibly damaging	Het
Hdhd5	A	G	6: 120,498,170 (GRCm39)	V143A	probably benign	Het
Heatr4	T	A	12: 84,026,501 (GRCm39)	Q252L	probably damaging	Het
Heatr5a	T	G	12: 52,002,291 (GRCm39)	D215A	possibly damaging	Het
Hipk2	G	T	6: 38,795,777 (GRCm39)	A164D	probably damaging	Het
Igsf11	A	G	16: 38,829,243 (GRCm39)	I46V	probably benign	Het
Iqgap1	C	T	7: 80,416,632 (GRCm39)		probably null	Het
Lrig1	A	G	6: 94,602,010 (GRCm39)	L281P	probably damaging	Het
Or10p22	A	G	10: 128,826,191 (GRCm39)	S137G	probably benign	Het
Or7g32	G	T	9: 19,389,061 (GRCm39)	H159N	probably benign	Het
Pcdha7	A	G	18: 37,108,174 (GRCm39)	T400A	probably damaging	Het
Pde5a	A	G	3: 122,618,573 (GRCm39)	T629A	probably benign	Het
Pkhd1l1	A	G	15: 44,426,051 (GRCm39)	D3204G	probably damaging	Het
Prkd2	T	C	7: 16,577,718 (GRCm39)	F57S	probably benign	Het
Prr15l	T	C	11: 96,825,433 (GRCm39)	V21A	probably damaging	Het
Rag2	T	A	2: 101,460,900 (GRCm39)	N403K	probably damaging	Het
Rsf1	ATGGCG	ATGGCGACGGTGGCG	7: 97,229,111 (GRCm39)		probably benign	Het
Rtl1	C	A	12: 109,560,937 (GRCm39)	D301Y	probably damaging	Het
Septin14	T	C	5: 129,770,051 (GRCm39)	N215S	probably benign	Het
Sin3a	T	A	9: 57,024,824 (GRCm39)	D1061E	probably benign	Het
Skint5	T	A	4: 113,574,324 (GRCm39)		probably null	Het
Stox2	A	T	8: 47,646,136 (GRCm39)	D441E	probably damaging	Het
Tmem52b	G	A	6: 129,493,705 (GRCm39)		probably null	Het
Tpm3-rs7	A	G	14: 113,552,292 (GRCm39)	E62G	probably benign	Het
Trim54	G	T	5: 31,291,424 (GRCm39)	V182L	probably damaging	Het
Trmt6	A	C	2: 132,651,778 (GRCm39)	V214G	probably damaging	Het
Ttc21b	T	C	2: 66,057,134 (GRCm39)	S613G	probably benign	Het
Ttll4	C	A	1: 74,718,508 (GRCm39)	R120S	possibly damaging	Het
Wdr41	A	T	13: 95,154,682 (GRCm39)	K354N	probably damaging	Het
Zfp652	A	T	11: 95,640,230 (GRCm39)	K52*	probably null	Het

Other mutations in Armh1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02049:Armh1	APN	4	117,094,860 (GRCm39)	missense	probably benign	0.37
R0350:Armh1	UTSW	4	117,072,753 (GRCm39)	nonsense	probably null
R0584:Armh1	UTSW	4	117,087,047 (GRCm39)	missense	probably damaging	1.00
R1570:Armh1	UTSW	4	117,087,189 (GRCm39)	missense	probably damaging	1.00
R4335:Armh1	UTSW	4	117,071,660 (GRCm39)	missense	probably damaging	0.99
R4898:Armh1	UTSW	4	117,094,977 (GRCm39)	missense	probably damaging	1.00
R5939:Armh1	UTSW	4	117,087,119 (GRCm39)	missense	probably damaging	1.00
R6300:Armh1	UTSW	4	117,088,979 (GRCm39)	missense	probably damaging	1.00
R7526:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7529:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7630:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7632:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7659:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7660:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7662:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7663:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7665:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7666:Armh1	UTSW	4	117,070,938 (GRCm39)	missense	probably benign	0.02
R7713:Armh1	UTSW	4	117,071,425 (GRCm39)	missense	possibly damaging	0.65
R8030:Armh1	UTSW	4	117,087,184 (GRCm39)	missense	probably benign	0.31
R8433:Armh1	UTSW	4	117,085,535 (GRCm39)	missense	probably benign	0.43
R8693:Armh1	UTSW	4	117,088,960 (GRCm39)	missense	probably damaging	1.00
R8756:Armh1	UTSW	4	117,094,861 (GRCm39)	missense	probably benign
R8832:Armh1	UTSW	4	117,094,867 (GRCm39)	missense	probably damaging	0.97
R8957:Armh1	UTSW	4	117,087,104 (GRCm39)	missense	probably damaging	1.00
R9064:Armh1	UTSW	4	117,094,855 (GRCm39)	missense	probably benign	0.00
Z1088:Armh1	UTSW	4	117,070,992 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- TTAGGTCTGTGGGAAGCACC -3'
(R):5'- TTAAACAAGCTCAGTCGAGATGCTC -3'

Sequencing Primer
(F):5'- CCGCTGGGAAAGGTAAGACTG -3'
(R):5'- GCTCAGTCGAGATGCTCTTAAAGC -3'

Posted On

2018-10-18