Incidental Mutation 'R6896:Or9g4'
ID 538314
Institutional Source Beutler Lab
Gene Symbol Or9g4
Ensembl Gene ENSMUSG00000075211
Gene Name olfactory receptor family 9 subfamily G member 4
Synonyms MOR213-4, Olfr1006, GA_x6K02T2Q125-47154544-47153606
MMRRC Submission 044990-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R6896 (G1)
Quality Score 225.009
Status Validated
Chromosome 2
Chromosomal Location 85504555-85509085 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 85505277 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Histidine at position 73 (Y73H)
Ref Sequence ENSEMBL: ENSMUSP00000149868 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000099917] [ENSMUST00000216084]
AlphaFold A2ALD2
Predicted Effect probably damaging
Transcript: ENSMUST00000099917
AA Change: Y73H

PolyPhen 2 Score 0.967 (Sensitivity: 0.77; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000097501
Gene: ENSMUSG00000075211
AA Change: Y73H

DomainStartEndE-ValueType
Pfam:7tm_4 39 315 1.3e-51 PFAM
Pfam:7tm_1 49 298 3.6e-20 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000216084
AA Change: Y73H

PolyPhen 2 Score 0.967 (Sensitivity: 0.77; Specificity: 0.95)
Meta Mutation Damage Score 0.1140 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.2%
  • 20x: 97.3%
Validation Efficiency 98% (49/50)
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 49 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcg2 T C 6: 58,660,298 (GRCm39) L454P probably damaging Het
Acadm T C 3: 153,641,957 (GRCm39) I192V probably damaging Het
Acadsb T A 7: 131,045,375 (GRCm39) Y436N probably benign Het
Ache G A 5: 137,289,996 (GRCm39) V442M probably damaging Het
Adam39 A T 8: 41,277,975 (GRCm39) N122I possibly damaging Het
Akap6 A T 12: 52,934,277 (GRCm39) I590F probably benign Het
Akap8 T C 17: 32,536,305 (GRCm39) N36S probably benign Het
Asap2 T C 12: 21,315,526 (GRCm39) S933P probably damaging Het
C3 C T 17: 57,527,864 (GRCm39) probably null Het
Cdon T A 9: 35,363,402 (GRCm39) M1K probably null Het
Cemip T A 7: 83,647,784 (GRCm39) I99F probably damaging Het
Cfap251 A G 5: 123,416,421 (GRCm39) T565A possibly damaging Het
Cfap58 T G 19: 47,932,626 (GRCm39) L130R probably damaging Het
Clca3a2 T C 3: 144,514,462 (GRCm39) D415G probably damaging Het
Coch A G 12: 51,649,652 (GRCm39) D321G possibly damaging Het
Dync2i1 C T 12: 116,193,291 (GRCm39) G554R possibly damaging Het
Efcab11 A G 12: 99,849,674 (GRCm39) probably benign Het
Ermap G T 4: 119,044,328 (GRCm39) S156* probably null Het
Fap G T 2: 62,334,944 (GRCm39) Y620* probably null Het
Galntl5 T C 5: 25,394,947 (GRCm39) probably null Het
Il21r C A 7: 125,226,128 (GRCm39) H76N probably damaging Het
Itpr1 T G 6: 108,458,355 (GRCm39) Y2041D probably damaging Het
Megf8 T A 7: 25,029,357 (GRCm39) N300K probably benign Het
Muc2 G A 7: 141,306,432 (GRCm39) V285I possibly damaging Het
Myh15 A T 16: 48,933,434 (GRCm39) Q623L probably benign Het
Myh7b T C 2: 155,464,488 (GRCm39) probably null Het
Naaladl1 T A 19: 6,159,335 (GRCm39) probably null Het
Nlrp9b T G 7: 19,757,170 (GRCm39) F136V probably damaging Het
Oprd1 A T 4: 131,844,612 (GRCm39) M132K probably damaging Het
Or10a3b T C 7: 108,444,750 (GRCm39) T156A probably benign Het
Or4s2b A G 2: 88,508,340 (GRCm39) N47S probably damaging Het
Or6c70 A T 10: 129,710,623 (GRCm39) M1K probably null Het
Patj T A 4: 98,314,287 (GRCm39) V369D possibly damaging Het
Pcdhb3 T C 18: 37,434,265 (GRCm39) L77P probably damaging Het
Pcf11 T C 7: 92,298,759 (GRCm39) D1259G probably damaging Het
Pdcl A T 2: 37,242,191 (GRCm39) H186Q probably damaging Het
Pdzd9 A T 7: 120,262,095 (GRCm39) *77R probably null Het
Reln C T 5: 22,104,177 (GRCm39) E3265K probably benign Het
Smg8 T C 11: 86,968,787 (GRCm39) T990A possibly damaging Het
Smok2a C T 17: 13,444,758 (GRCm39) H112Y probably benign Het
Spatc1l G A 10: 76,405,242 (GRCm39) R208H probably damaging Het
Taf7 T C 18: 37,775,733 (GRCm39) D278G possibly damaging Het
Vipas39 T C 12: 87,289,345 (GRCm39) N373S probably benign Het
Vmn2r78 C T 7: 86,571,558 (GRCm39) T456I probably benign Het
Vwf T C 6: 125,543,157 (GRCm39) S148P probably damaging Het
Xpot A C 10: 121,449,390 (GRCm39) probably null Het
Zdbf2 A T 1: 63,348,031 (GRCm39) R2137W probably damaging Het
Zfp462 T A 4: 55,009,544 (GRCm39) N503K possibly damaging Het
Zfp641 T A 15: 98,191,684 (GRCm39) M1L probably benign Het
Other mutations in Or9g4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01139:Or9g4 APN 2 85,504,841 (GRCm39) missense probably damaging 1.00
IGL01520:Or9g4 APN 2 85,504,701 (GRCm39) missense probably benign 0.00
IGL01939:Or9g4 APN 2 85,505,285 (GRCm39) missense probably damaging 1.00
IGL02060:Or9g4 APN 2 85,505,178 (GRCm39) missense probably benign 0.34
IGL02171:Or9g4 APN 2 85,505,285 (GRCm39) missense probably damaging 1.00
IGL03058:Or9g4 APN 2 85,505,025 (GRCm39) missense probably benign 0.00
IGL03210:Or9g4 APN 2 85,504,697 (GRCm39) missense probably damaging 1.00
BB002:Or9g4 UTSW 2 85,504,907 (GRCm39) missense
BB012:Or9g4 UTSW 2 85,504,907 (GRCm39) missense
R0294:Or9g4 UTSW 2 85,505,060 (GRCm39) missense probably damaging 0.99
R1304:Or9g4 UTSW 2 85,504,682 (GRCm39) missense probably damaging 1.00
R1476:Or9g4 UTSW 2 85,505,262 (GRCm39) missense possibly damaging 0.92
R4757:Or9g4 UTSW 2 85,504,664 (GRCm39) missense probably damaging 1.00
R4793:Or9g4 UTSW 2 85,504,842 (GRCm39) missense probably damaging 1.00
R5804:Or9g4 UTSW 2 85,504,682 (GRCm39) missense probably damaging 1.00
R6146:Or9g4 UTSW 2 85,504,938 (GRCm39) nonsense probably null
R6511:Or9g4 UTSW 2 85,505,184 (GRCm39) missense possibly damaging 0.61
R7075:Or9g4 UTSW 2 85,505,168 (GRCm39) missense
R7344:Or9g4 UTSW 2 85,505,275 (GRCm39) nonsense probably null
R7350:Or9g4 UTSW 2 85,505,189 (GRCm39) missense
R7925:Or9g4 UTSW 2 85,504,907 (GRCm39) missense
R8704:Or9g4 UTSW 2 85,504,562 (GRCm39) missense
Predicted Primers PCR Primer
(F):5'- AGCTACTAGCCCAGTACAGAG -3'
(R):5'- CATCCTTGTGGGCTTCTCAG -3'

Sequencing Primer
(F):5'- CATGATGCTTGAATAGATCAATGGAC -3'
(R):5'- TTCTCAGCAGACCCCCACTG -3'
Posted On 2018-11-06