Mutagenetix > Incidental Mutation

Incidental Mutation 'R6928:Mtmr9'

539865

Institutional Source

Beutler Lab

Gene Symbol

Mtmr9

Ensembl Gene

ENSMUSG00000035078

Gene Name

myotubularin related protein 9

Synonyms

MTMR8, 9430075G12Rik, LIP-STYX, mMTMH3

MMRRC Submission

045045-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.412) question?

Stock #

R6928 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

63757100-63781402 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 63781042 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 16 (V16A)

Ref Sequence

ENSEMBL: ENSMUSP00000059894 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000058679]

AlphaFold

Q9Z2D0

Predicted Effect

probably benign
Transcript: ENSMUST00000058679
AA Change: V16A

PolyPhen 2 Score 0.027 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000059894
Gene: ENSMUSG00000035078
AA Change: V16A

Domain	Start	End	E-Value	Type
Pfam:Myotub-related	108	446	2.2e-133	PFAM

Meta Mutation Damage Score

0.1034

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.1%
20x: 97.5%

Validation Efficiency

98% (62/63)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a myotubularin-related protein that is atypical to most other members of the myotubularin-related protein family because it has no dual-specificity phosphatase domain. The encoded protein contains a double-helical motif similar to the SET interaction domain, which is thought to have a role in the control of cell proliferation. In mouse, a protein similar to the encoded protein binds with MTMR7, and together they dephosphorylate phosphatidylinositol 3-phosphate and inositol 1,3-bisphosphate. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 60 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adcyap1r1	A	G	6: 55,456,257 (GRCm39)	D215G	possibly damaging	Het
Asb3	A	T	11: 30,948,326 (GRCm39)	M40L	probably damaging	Het
Aspg	G	A	12: 112,093,123 (GRCm39)	V547M	possibly damaging	Het
Aspm	T	A	1: 139,407,944 (GRCm39)	L2277*	probably null	Het
Atp7b	A	G	8: 22,484,828 (GRCm39)	S1295P	probably benign	Het
Cdca2	A	G	14: 67,943,193 (GRCm39)	S199P	probably damaging	Het
Cdh1	A	G	8: 107,387,642 (GRCm39)	E514G	possibly damaging	Het
Cenpk	G	T	13: 104,365,500 (GRCm39)		probably benign	Het
Col6a5	C	A	9: 105,817,118 (GRCm39)	V398L	unknown	Het
Colec10	A	T	15: 54,326,002 (GRCm39)	K277N	probably damaging	Het
Cryzl2	T	G	1: 157,298,357 (GRCm39)	S249A	probably benign	Het
Cspg4	T	A	9: 56,805,164 (GRCm39)	Y1992N	possibly damaging	Het
Drd3	G	T	16: 43,641,683 (GRCm39)	R333L	probably benign	Het
Espl1	C	T	15: 102,207,342 (GRCm39)	R269C	probably benign	Het
Esr2	C	T	12: 76,212,252 (GRCm39)	C188Y	probably damaging	Het
Focad	A	G	4: 88,267,112 (GRCm39)	D1041G	unknown	Het
Frem3	T	C	8: 81,337,911 (GRCm39)	F68S	possibly damaging	Het
Gapdh	A	G	6: 125,139,634 (GRCm39)	V212A	probably damaging	Het
Gzmb	T	C	14: 56,497,734 (GRCm39)	K169E	probably benign	Het
Hexd	T	A	11: 121,102,880 (GRCm39)	F33I	possibly damaging	Het
Hsd3b6	T	C	3: 98,718,269 (GRCm39)	I32V	probably benign	Het
Jcad	T	C	18: 4,673,372 (GRCm39)	V378A	probably benign	Het
Kcnmb2	T	C	3: 32,253,190 (GRCm39)	S177P	probably benign	Het
Lrriq1	A	T	10: 103,050,800 (GRCm39)	S651T	possibly damaging	Het
Map3k2	T	C	18: 32,340,593 (GRCm39)		probably null	Het
Mib1	T	G	18: 10,802,282 (GRCm39)	S870A	probably benign	Het
Moap1	T	A	12: 102,708,871 (GRCm39)	N226I	probably damaging	Het
Moxd1	T	A	10: 24,176,186 (GRCm39)	N547K	probably damaging	Het
Nme1	T	C	11: 93,850,229 (GRCm39)	Y151C	probably damaging	Het
Nwd1	T	C	8: 73,408,653 (GRCm39)	F879L	probably benign	Het
Nynrin	T	G	14: 56,101,335 (GRCm39)	S335A	probably benign	Het
Or52ac1	A	T	7: 104,245,796 (GRCm39)	Y197*	probably null	Het
Or5ac25	C	A	16: 59,181,826 (GRCm39)	G252C	probably damaging	Het
Or5b102	A	T	19: 13,041,348 (GRCm39)	H191L	probably benign	Het
Or5b99	A	G	19: 12,977,202 (GRCm39)	N284S	probably damaging	Het
Or8d23	T	C	9: 38,841,862 (GRCm39)	Y132H	probably damaging	Het
Or8g21	T	C	9: 38,905,928 (GRCm39)	M268V	probably benign	Het
Pcdhb21	A	G	18: 37,647,474 (GRCm39)	E201G	probably damaging	Het
Plscr1	T	C	9: 92,152,004 (GRCm39)	V301A	possibly damaging	Het
Psg28	A	T	7: 18,157,003 (GRCm39)	S411T	possibly damaging	Het
Rif1	T	C	2: 51,985,973 (GRCm39)	W653R	probably damaging	Het
Rnd3	T	A	2: 51,022,518 (GRCm39)	I175L	probably benign	Het
Rtn4	A	G	11: 29,656,791 (GRCm39)	E199G	possibly damaging	Het
Sgpp1	T	C	12: 75,763,344 (GRCm39)	Y279C	probably damaging	Het
Slc2a13	A	G	15: 91,160,382 (GRCm39)	I524T	probably damaging	Het
Speer4a2	A	G	5: 26,290,586 (GRCm39)		probably null	Het
Spg11	C	T	2: 121,900,385 (GRCm39)	V1556I	probably benign	Het
Spopfm1	T	A	3: 94,173,855 (GRCm39)	C288S	probably benign	Het
Srebf2	C	T	15: 82,087,924 (GRCm39)	R215*	probably null	Het
Tdpoz8	G	A	3: 92,981,267 (GRCm39)	C95Y	probably damaging	Het
Tmem19	T	C	10: 115,183,179 (GRCm39)	N147S	possibly damaging	Het
Tpr	T	C	1: 150,284,536 (GRCm39)	S408P	possibly damaging	Het
Trav13d-4	C	T	14: 53,310,618 (GRCm39)	T53I	probably damaging	Het
Trf	T	A	9: 103,099,307 (GRCm39)	R168W	possibly damaging	Het
Trim11	A	G	11: 58,879,669 (GRCm39)	K273R	probably damaging	Het
Tsacc	T	A	3: 88,190,247 (GRCm39)	M68L	probably benign	Het
Ttn	T	A	2: 76,584,869 (GRCm39)	M22110L	probably benign	Het
Zfp160	G	T	17: 21,261,724 (GRCm39)	G104V	probably benign	Het
Zfp582	T	C	7: 6,357,266 (GRCm39)	Y360H	probably damaging	Het
Zranb1	G	A	7: 132,568,323 (GRCm39)	R301H	possibly damaging	Het

Other mutations in Mtmr9

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00929:Mtmr9	APN	14	63,780,946 (GRCm39)	missense	probably damaging	1.00
IGL01309:Mtmr9	APN	14	63,764,254 (GRCm39)	missense	probably damaging	1.00
IGL01999:Mtmr9	APN	14	63,779,903 (GRCm39)	missense	probably damaging	1.00
IGL02164:Mtmr9	APN	14	63,767,737 (GRCm39)	missense	probably damaging	0.98
IGL02276:Mtmr9	APN	14	63,767,725 (GRCm39)	missense	probably damaging	1.00
IGL02868:Mtmr9	APN	14	63,761,588 (GRCm39)	missense	probably benign	0.41
IGL03347:Mtmr9	APN	14	63,781,016 (GRCm39)	missense	probably benign	0.03
R0089:Mtmr9	UTSW	14	63,765,696 (GRCm39)	missense	possibly damaging	0.80
R1231:Mtmr9	UTSW	14	63,765,640 (GRCm39)	missense	possibly damaging	0.55
R1562:Mtmr9	UTSW	14	63,771,786 (GRCm39)	missense	probably benign
R1726:Mtmr9	UTSW	14	63,774,547 (GRCm39)	missense	possibly damaging	0.93
R2016:Mtmr9	UTSW	14	63,777,713 (GRCm39)	missense	possibly damaging	0.59
R3751:Mtmr9	UTSW	14	63,780,997 (GRCm39)	missense	probably damaging	1.00
R6092:Mtmr9	UTSW	14	63,779,901 (GRCm39)	missense	possibly damaging	0.47
R6139:Mtmr9	UTSW	14	63,767,227 (GRCm39)	missense	probably benign
R7158:Mtmr9	UTSW	14	63,764,318 (GRCm39)	missense	probably benign
R7939:Mtmr9	UTSW	14	63,771,973 (GRCm39)	missense	probably damaging	1.00
R8859:Mtmr9	UTSW	14	63,781,226 (GRCm39)	start gained	probably benign
R9037:Mtmr9	UTSW	14	63,761,532 (GRCm39)	missense	possibly damaging	0.67
R9276:Mtmr9	UTSW	14	63,781,001 (GRCm39)	missense	probably damaging	1.00
R9547:Mtmr9	UTSW	14	63,779,855 (GRCm39)	missense	possibly damaging	0.89

Predicted Primers

PCR Primer
(F):5'- AAGCGTCTGTTCCGTTCCAG -3'
(R):5'- CAACGCTCAGCAGCTACTTC -3'

Sequencing Primer
(F):5'- CGTTCCAGGCTCCTCCG -3'
(R):5'- AAGCCTTCTCTGCGACCGAG -3'

Posted On

2018-11-06